Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu07g1316 ATGCACAGAATCGCCGGTTCACGACTCAGGTCGCTCAAGAACCATGCGGCCAATTTGGGGGCCTCTAGATTTGCAACATCCAGTGCAGTTGCTGCAAGACCAACGTCTGGAGGGTTTTTTAGCTGGCTCACTGGAGAACGTTCAAGCTCTCTTCCCCCATTGGAAACACCACTATCTGGTATTACCCTCCCACCACCATTGCCTGATCACGTTGAACCAAGCAAGACCAAGATTACAACTCTTCCTAATGGTGTCAGAATAGCTTCAGAAACTTCTTCGAACCCTGCAGCCTCTATTGGGATATATCTTGATTGTGGTTCCATATATGAGACCCCAGTGTCTTCCGGAGCATCACATTTGCTGGAAAGGTTGGCCTTCAAGAGCACAACAAATCGAAGCCATTTGCGCATTGTTAGGGAAGTAGAAGCTATTGGTGGCAACACAGGTGCCTCTGCCTCCCGGGAGCAAATGGGATACACTTTTGATGCTTTAAAGACATATGTTCCAGAAATGGTGGAATTGCTAGTAGACTGTGTCAGGAATCCTGTATTTTTGGATTGGGAAATCAATGAAGAGCTGCAAAAGCTAAAAGCAGAAATTGGAGAACTTGCAAATAACCCCCAGGGCTTACTTCTCGAGGCAATTCATTCTGCTGGGTATTCTGGGGCACTTGCAAATCCTCTTGTGGCTCCAGAGTTTGCATTAAGCAGATTGGATGGCACCATCTTGGAGGAATTTATTGCTGAGAACTATACTGCTCCTAGAATGGTGCTTGCAGCATCAGGGGTTGAACATGAGGAGCTTTTATCCATTGCAGAACCTCTTCTATCTGACCTACCCAAAGTACCCATTGTGAGAGTGCCGGAATCTGCATATGTTGGAGGGGATTATCGTCGTCAAGCTGACTGTGGGAGCACACATGTTGCCCTGGCTTTTGAGGTTCCTGGTGGCTGGCACAAGGAGAAAGATGCCATTGTTTTGACGGTTCTTCAGATGCTTATGGGAGGTGGTGGTTCATTTTCTGCTGGGGGCCCTGGTAAAGGCATGCACTCGAGGTTATATCTCCGTGTTTTGAATGAGTACCAGCAGATTCAATCTTTTTCTGCATTTAACAGCATCTTCAATAACACGGGACTGTTTGGAATTTATGCTAGCACTGGTTCTGACTTTGTGGCCCAAGCAGTTGATATTGCTGCATCAGAACTAATCTCAATTGCAACTCCTGGACAAGTTTCCCAGGTGCAGCTTAACCGTGCCAAAGAATCAACAAAATCTGCAGTTTTGATGAATCTAGAGTCCAGGATGATCGTGTCTGAGGATATTGGGAGGCAGATTTTGACATATGGAGAAAGGAAACCTGTAGAGCACTTCTTAAAGGCCGTAGACTCAATCACTTTGAACGATATTACTAACATTGCCCAGAAAGTTATATCTTCTCCTTTAACGATGGCATCATACGGAGACGTTATTAATGTCCCAACCTACGAGTCTGTTAACAGCAGAGAAGTGAGAGCGAAGAAACCACAACCAAAACAGAGAAGGGAAAATTTCAGAGGGAATTTCTTTGATTCATTAACTCGGCGAAGATCGAAAATGTCGTGGCAATCTTACATTGATGATCAGTTGATGTATGAGGTCGATGGCCAACATCTCAAAGCCGCTGCTATAATCGGTAACGACGGTTCTATTTGGGCTCAGAGCACCGGTTTCCCTCAGTACAAGCCAGAAGAGATTACTGCCATTATGAAGGATTTTGATGAGCCTGGATCTCTTGCTCCGACTGGGTTGCACCTTGGTGGATCGAAGTACATGGTTATCCAGGGGGAATCTGGAGCTGTTATCCGTGGAAAGAAGGGCACTTCTGGGATCACTGTAAAGAAAACAAACCAAGCACTGATTTTTGGTTTATATGATGAACCCATGACTCCAGGACAGTGCAACATGATTGTTGAGAAGTTGGGAGATTACCTGATTGATCAAGGCCTAAAAAATAACAGTGTGAAGAATCAGGATGAAGAGCAAGAGTGTGGTGATTTTGGTCGTTGA 2046 45.26 MHRIAGSRLRSLKNHAANLGASRFATSSAVAARPTSGGFFSWLTGERSSSLPPLETPLSGITLPPPLPDHVEPSKTKITTLPNGVRIASETSSNPAASIGIYLDCGSIYETPVSSGASHLLERLAFKSTTNRSHLRIVREVEAIGGNTGASASREQMGYTFDALKTYVPEMVELLVDCVRNPVFLDWEINEELQKLKAEIGELANNPQGLLLEAIHSAGYSGALANPLVAPEFALSRLDGTILEEFIAENYTAPRMVLAASGVEHEELLSIAEPLLSDLPKVPIVRVPESAYVGGDYRRQADCGSTHVALAFEVPGGWHKEKDAIVLTVLQMLMGGGGSFSAGGPGKGMHSRLYLRVLNEYQQIQSFSAFNSIFNNTGLFGIYASTGSDFVAQAVDIAASELISIATPGQVSQVQLNRAKESTKSAVLMNLESRMIVSEDIGRQILTYGERKPVEHFLKAVDSITLNDITNIAQKVISSPLTMASYGDVINVPTYESVNSREVRAKKPQPKQRRENFRGNFFDSLTRRRSKMSWQSYIDDQLMYEVDGQHLKAAAIIGNDGSIWAQSTGFPQYKPEEITAIMKDFDEPGSLAPTGLHLGGSKYMVIQGESGAVIRGKKGTSGITVKKTNQALIFGLYDEPMTPGQCNMIVEKLGDYLIDQGLKNNSVKNQDEEQECGDFGR 681
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 28482162 28489939 - CmPI595203_07g013160.1 Cmu07g1316 420867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu07g1316 681 SMART prof_2 532 662 IPR005455 GO:0003779(InterPro)
Cmu07g1316 681 CDD PROF 533 661 IPR005455 GO:0003779(InterPro)
Cmu07g1316 681 SUPERFAMILY Profilin (actin-binding protein) 533 661 IPR036140 -
Cmu07g1316 681 PRINTS Profilin signature 552 561 IPR005455 GO:0003779(InterPro)
Cmu07g1316 681 PRINTS Profilin signature 595 609 IPR005455 GO:0003779(InterPro)
Cmu07g1316 681 PRINTS Profilin signature 534 543 IPR005455 GO:0003779(InterPro)
Cmu07g1316 681 PRINTS Profilin signature 571 591 IPR005455 GO:0003779(InterPro)
Cmu07g1316 681 PRINTS Profilin signature 631 644 IPR005455 GO:0003779(InterPro)
Cmu07g1316 681 PRINTS Profilin signature 644 661 IPR005455 GO:0003779(InterPro)
Cmu07g1316 681 Pfam Peptidase M16 inactive domain 243 421 IPR007863 -
Cmu07g1316 681 ProSitePatterns Insulinase family, zinc-binding region signature. 106 129 IPR001431 GO:0004222(InterPro)|GO:0006508(InterPro)
Cmu07g1316 681 Pfam Insulinase (Peptidase family M16) 86 231 IPR011765 -
Cmu07g1316 681 SUPERFAMILY LuxS/MPP-like metallohydrolase 292 496 IPR011249 GO:0046872(InterPro)
Cmu07g1316 681 FunFam Mitochondrial-processing peptidase subunit beta 66 281 - -
Cmu07g1316 681 Gene3D - 67 278 - -
Cmu07g1316 681 FunFam Profilin 532 662 - -
Cmu07g1316 681 Pfam Profilin 532 662 IPR048278 GO:0003779(InterPro)
Cmu07g1316 681 Gene3D Dynein light chain 2a, cytoplasmic 530 662 - -
Cmu07g1316 681 PANTHER METALLOPROTEASE 72 496 IPR050361 GO:0005739(PANTHER)
Cmu07g1316 681 FunFam mitochondrial-processing peptidase subunit alpha 290 498 - -
Cmu07g1316 681 SUPERFAMILY LuxS/MPP-like metallohydrolase 75 284 IPR011249 GO:0046872(InterPro)
Cmu07g1316 681 PRINTS Plant profilin signature 648 661 IPR005455 GO:0003779(InterPro)
Cmu07g1316 681 PRINTS Plant profilin signature 615 630 IPR005455 GO:0003779(InterPro)
Cmu07g1316 681 PRINTS Plant profilin signature 558 571 IPR005455 GO:0003779(InterPro)
Cmu07g1316 681 PRINTS Plant profilin signature 602 611 IPR005455 GO:0003779(InterPro)
Cmu07g1316 681 PRINTS Plant profilin signature 532 545 IPR005455 GO:0003779(InterPro)
Cmu07g1316 681 PRINTS Plant profilin signature 583 597 IPR005455 GO:0003779(InterPro)
Cmu07g1316 681 PRINTS Plant profilin signature 635 648 IPR005455 GO:0003779(InterPro)
Cmu07g1316 681 Gene3D - 290 504 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu07g1316 Cmu-Chr7:28482162 Cmu11g1503 Cmu-Chr11:27345412 3.00E-52 dispersed
Cmu07g0744 Cmu-Chr7:17668949 Cmu07g1316 Cmu-Chr7:28482162 7.30E-54 transposed
Cmu11g0190 Cmu-Chr11:2366504 Cmu07g1316 Cmu-Chr7:28482162 5.00E-209 transposed
Cmu11g0197 Cmu-Chr11:2441575 Cmu07g1316 Cmu-Chr7:28482162 1.70E-60 wgd
Cmu07g1316 Cmu-Chr7:28482162 Cmu09g0024 Cmu-Chr9:537058 4.10E-57 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu07g1316 K01412 - csv:101217854 934.865