Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu07g1324 ATGGCAACTCTCCAATTCTTCCTTCTCATTTTTCTTTCCAGTTTCGCTCTCTTTCATTTCGTCTCTGCAGAGAATCCTTCAGGTTTCATCAGTTTAGACTGTGGACTTCCGGCGAACTCCACATACACAGAGCCAAACACCGGAATAATCTACGAATCCGATGCGGCGTTCATAAATTCTGGTGAAATCCACAACGTTTCCGCTGATAACATAAAGAATGGCTTGAAACAGCCGATGTGGAGTCTGAGGAGCTTTCCGGAAGGAATTAGGAATTGTTACAAATTGAAAGTGAGGAACGGGACGAAGTATTTGATTCGAGCGGCTTTTTGGTACGGAAATTACGATGGTAAAAGGAATTCACCTGGATTTGATCTGTATTTCGGAGCAAATTTTTGGGACTCGGTTGCATTTGAAGGAAATTTTACAGTGAGGAAGGAGATTGTGCATATAGTTTCATCAAGTGATGTGCAAATTTGTGTCGTGAATGTTGGAACTGGAATTCCATTCATTTCGGCTCTGGAATTGAGGCCTCTAAAAGACTCTGTTTACGAGACTGGATCTCTGACATTAGCTAATTTCCTACGCCTCGATTTCGGCTCCCTTGATAATCAAACTATCAGGTATCAAGACGACGTCTACGATCGAATCTGGGATCCACCAGTTCCCATTCGAGGATGGACAACCTTAAACACTTCGGAGAAAGTTTCCGTGGACGATCCGCTCTTCTTCCAACCGGCTCCGGCGGCCATGAACACGGCGGCGACACCGAGTAACGAAAGCGCTCCGATGGCGTTCACTTGGCTGCCACCGGATTCGACGACGGCGTTTTTCGTGTACATGTACTTTGCGGAGCTGAAGGTGCTTGGAGCGAATGAGTCGAGAGTGTTCGACGTATTTCTGAACGGAAAACGATGGATTAATGAATCGCTTTCTCCCAGCTATTTAGCGGAATTGGCGTTTTACAGTACCACGCCTCTGACCGGCGGAACCTACCAGATCTCCTTCGTCAGAACTCCCAATTCAACTCTTCCTCCCATTCTCAATGCCCTTGAGATTTATCGAGTTCTTAATTTATCGCTATCCGAGACCAGTGGGCAAGATGTTGTCGCCATTGAAAACATCAAGGCAATTTATGGAGTTAAAAGAAACTGGCAAGGAGATCCCTGTGCCCCAAAGGACTTCATTTGGGAAGGACTCAACTGTAGCTTTTTGAATTCTGAGCCTCCCAGAATCATATCCTTGGATTTGTCCTCAAGTGGACTGACAGGGGAAATACCTCGAGCGATAGCAAATCTTAAAATGCTGGAGTCTTTAGATCTATCAAACAATAATTTGAGTGGACCAGTGCCTGATTTTCTCACTCAATTGCCATCCTTGCGAGTTCTAAACTTGGAAAGAAACAAGCTTTCAGGACTAATTCCGGCCCAGCTCGTAGAGAAGTCCAATAATGGCTCTCTGACATTAAGATTTGGTGATAATCCAAATCTGTTTACTACGCCTGAAAGGAGAAAGAAGCAAAGCAATGTTGTTGTTCCTCTAGTAGCATCAGTTGTTGCATTTCTTCTGCTTTCGTTCTTAATTGCAGCGGCTATCTTTTGGAAGACAAAAAGAAGAAAATCAAAAGGAGCCGAAATTAGAGTGGTGAAACAAACTGTTGATCAATCTCAAAATTGGGACACAGCCAAGAGATGTTATTCATACTCAGATGTCCTAAGAATGACAAACAATTTCGAGCGTATGCTTGGAGAAGGCGGCTTTGGAAGAGTTTACTATGGAAAAATTGAGAACGCTGAAGTAGCTGTAAAAATGCTATCTCCTCAATCAGTTCAAGGCTATCAACAATTTCAAGCAGAGGTTGAGCTTCTTATGAGGGTTCACCATAGAAACTTGACTGGTCTTGTTGGGTATTGCAATGAACCAGCCTACAAAGGACTTATCTACGAGTACATGGCCAGAGGGAACTTAGGATCTCTCATGTCAGATGGCAAGTCAGCTTTGTTGAACTGGGAAGTCAGACTTCATATAGCAGTGGATGCAGCACAAGGATTGCAATACTTGCATTCTGGTATAAAGCCAGCTATTGTACATAGAGATGTAAAATCTTCCAACATCTTATTGGATGACAACTTTCAAGCAAAAGTATCTGATTTTGGCTTGTCGAGAATTTTTCCCGTCGACGATGGTGCCACTCATGTGACAACCAATGTGGTTGGCACTCCTGGTTACCTCGACCCTGAATACTACACATCTTATAGATTAAACGAAAAAAGCGACGTGTATGGCTTCGGAATTGTTCTTCTAGAAATCATAACTGGGAGACCAGTTTTGACAAAGACTCAAGACAAGGTAACTCACATCTATCAATGGGTCGACTCAATGGTTTCTCAAGGTGATATCAGCTCCATCATCGATCCGAAATTGAAAGAAGATTTCGAGGTGAACACCATTTGGAAGGCGGTTGAAATAGCGATGTCGTGCGCATCTCCCATGTCTACAAATAGGCCAACTATGAGCCAAGTTGTGATACAATTGAACGAATGTTTGAATATGGAGTTAGCTCACAGTAATAACAATCATCAACCTGAATCTGTAGTTGAAGATCATGTTTCTCTGTTTGGTCCAGAAGCAAGGTAG 2634 43.2 MATLQFFLLIFLSSFALFHFVSAENPSGFISLDCGLPANSTYTEPNTGIIYESDAAFINSGEIHNVSADNIKNGLKQPMWSLRSFPEGIRNCYKLKVRNGTKYLIRAAFWYGNYDGKRNSPGFDLYFGANFWDSVAFEGNFTVRKEIVHIVSSSDVQICVVNVGTGIPFISALELRPLKDSVYETGSLTLANFLRLDFGSLDNQTIRYQDDVYDRIWDPPVPIRGWTTLNTSEKVSVDDPLFFQPAPAAMNTAATPSNESAPMAFTWLPPDSTTAFFVYMYFAELKVLGANESRVFDVFLNGKRWINESLSPSYLAELAFYSTTPLTGGTYQISFVRTPNSTLPPILNALEIYRVLNLSLSETSGQDVVAIENIKAIYGVKRNWQGDPCAPKDFIWEGLNCSFLNSEPPRIISLDLSSSGLTGEIPRAIANLKMLESLDLSNNNLSGPVPDFLTQLPSLRVLNLERNKLSGLIPAQLVEKSNNGSLTLRFGDNPNLFTTPERRKKQSNVVVPLVASVVAFLLLSFLIAAAIFWKTKRRKSKGAEIRVVKQTVDQSQNWDTAKRCYSYSDVLRMTNNFERMLGEGGFGRVYYGKIENAEVAVKMLSPQSVQGYQQFQAEVELLMRVHHRNLTGLVGYCNEPAYKGLIYEYMARGNLGSLMSDGKSALLNWEVRLHIAVDAAQGLQYLHSGIKPAIVHRDVKSSNILLDDNFQAKVSDFGLSRIFPVDDGATHVTTNVVGTPGYLDPEYYTSYRLNEKSDVYGFGIVLLEIITGRPVLTKTQDKVTHIYQWVDSMVSQGDISSIIDPKLKEDFEVNTIWKAVEIAMSCASPMSTNRPTMSQVVIQLNECLNMELAHSNNNHQPESVVEDHVSLFGPEAR 877
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 28541493 28547692 + CmPI595203_07g013240.1 Cmu07g1324 420875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu07g1324 877 ProSitePatterns Serine/Threonine protein kinases active-site signature. 694 706 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu07g1324 877 PANTHER OS07G0107800 PROTEIN-RELATED 23 852 - -
Cmu07g1324 877 SUPERFAMILY L domain-like 372 477 - -
Cmu07g1324 877 Gene3D Phosphorylase Kinase; domain 1 547 649 - -
Cmu07g1324 877 ProSitePatterns Protein kinases ATP-binding region signature. 581 602 IPR017441 GO:0005524(InterPro)
Cmu07g1324 877 Pfam Malectin-like domain 32 355 IPR024788 -
Cmu07g1324 877 Pfam Leucine rich repeat 413 469 IPR001611 GO:0005515(InterPro)
Cmu07g1324 877 Gene3D Transferase(Phosphotransferase) domain 1 650 870 - -
Cmu07g1324 877 FunFam Leucine-rich repeat receptor-like protein kinase 553 649 - -
Cmu07g1324 877 SUPERFAMILY Protein kinase-like (PK-like) 559 844 IPR011009 -
Cmu07g1324 877 Pfam Protein tyrosine and serine/threonine kinase 577 843 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu07g1324 877 Gene3D Ribonuclease Inhibitor 369 488 IPR032675 -
Cmu07g1324 877 ProSiteProfiles Protein kinase domain profile. 575 848 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu07g1324 877 SMART serkin_6 575 848 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu07g1324 877 PRINTS Leucine-rich repeat signature 435 448 - -
Cmu07g1324 877 PRINTS Leucine-rich repeat signature 456 469 - -
Cmu07g1324 877 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 650 857 - -
Cmu07g1324 877 FunFam Leucine-rich repeat receptor-like kinase 366 499 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g2669 Cmu-Chr5:35233172 Cmu07g1324 Cmu-Chr7:28541493 1.20E-117 dispersed
Cmu07g1324 Cmu-Chr7:28541493 Cmu09g0031 Cmu-Chr9:607327 1.50E-213 dispersed
Cmu07g1323 Cmu-Chr7:28534658 Cmu07g1324 Cmu-Chr7:28541493 5.00E-33 tandem
Cmu07g1324 Cmu-Chr7:28541493 Cmu07g1325 Cmu-Chr7:28551408 3.30E-192 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75675 PF12819 Malectin_like 2.50E-110 CL0202 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu07g1324 - - - 0.0