Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu07g1341 ATGAGTCGGGAGCAGAAGCGGGGAAAGCAGGACAAAGGTTCTGATGATGTCCAGAAGGTGATTGTTGCAGTGAAGGCTTCCAAAGAAATTCCTAAAACTGCACTGGTTTGGGCGTTGACTCATGTTGTTCAAATAGGAGATTGCATAACTCTGCTGGTTGTTGTCCCTTCTCAAAGCTCTGGTAGAAAATTCTGGGGTTTTCCGAGATTTGCTGGGGATTGTGCAAGTGGTCACAAGAAAGCTCATTCTGGAACAAGCTCGGAGCTGAAATGTGATATTACCGATTCCTGTTCGCAGATGATCCTTCAGCTTCATGATGTTTATGATCCAAATAAGATAAATGTGAAAATTAAAATTGTTTCGGGGTCGCCAAGTGGGTCTGTAGCTGCTGAGGCCAAGAGAGCTCAAGCTAGCTGGGTTGTATTAGACAAACAGCTCAAACACGAGGAGAAATGTTGCATGGAAGAGTTACAGTGCAACATTGTGGTAATGAAGCGATCACAACCGAAAGTTCTTCGTTTGAACCTGGTTGGGTCTCCAAAGAAGGAACAAGAAGTGCCCTCTCCGTCACCTTCTGATATAGATGAAGGGTCTGAAAGCCATCAAAAAGAAAATAATGATCCTCTAGATTTCATACGGGGACCAGTTGTGACCCCCAGTAGCAGCCCAGAGTTGGGCACACCTTTTACCGTTACCGAAGCTGGAACATCATCAGTGTCAAGCTCAGATCCTGGAACTTCACCATTTTTTAACTCTGAAATGAATGGAGACACAAAGAAGGAGGAATTGTTTGTTATAAAGGAAAATAAAGAACTTGATGCTGCTAGTTCAGACTCGGATATTGAGAATTTATCTGTATCTTCTGCGAGTTTAAGATTCCAACCATGGATGACAGAGTTTCTAAGTTCTCATCTTCAATCCTCACAACACATAAGTGGAAGGTCACAGAGATGTGATGATATGAATCAAGTGTCAACAAGAAAATCTTTTCTACCAAAGTCTTCTAAACTTGACAGAGAATCAAGCATTGGAATGTCAAGCCATAGAAGTGACAATGATTTTCATGGAGATGTACGAGATGCAGTTTCATTATCCCGGAACACACCACCAGGCCCTCCTCCATTATGTTCAATATGCCAACACAAGGCACCAGTTTTTGGAAAGCCTCCAAGGTGGTTTAGCTATGCTGAGCTGGAGCTTGCTACTGGTGGATTTTCACAAGCCAACTTTTTGGCTGAAGGAGGATATGGATCTGTTCACAGAGGGGTACTCCCAGATGGACAGGTGGTCGCCGTCAAGCAGCACAAACTAGCTAGTTCTCAGGGAGACCTTGAATTTTGTTCAGAAGTCGAAGTTCTTAGCTGTGCACAACATCGAAACGTTGTTATGTTGATTGGCTTTTGTATAGAGGAGAAGAGAAGGTTGTTGGTGTATGAATACATCTGCAATGGTTCACTGGATTCTCATTTATATGGACGCCAACAAGAGCCACTAGAATGGTCTGCACGGCAAAAAATTGCTGTGGGAGCTGCAAGGGGGCTACGATATCTCCATGAAGAATGTAGAGTGGGTTGCATTGTTCACCGGGATATGCGGCCAAACAACATTCTTATCACCCATGATTTTGAACCACTAGTTGGAGATTTTGGCCTTGCAAGGTGGCAGCCGGACGGAGATACCGGTGTTGAAACAAGAGTTATTGGAACATTTGGGTATTTGGCTCCAGAGTATGCTCAAAGTGGCCAAATCACAGAAAAAGCGGATGTTTATTCCTTTGGGGTGGTACTGGTGGAGCTAATTACTGGAAGAAAAGCCGTAGACCTTAGTCGGCCGAAAGGTCAACAGTGTCTCACTGAATGGGCGCGCCCCTTGTTGGATGAATTTCTTATTGATGAACTGATTGATCCGAGGTTGGGAAATAACTTTGCAGAGCATGAAGTGTACTGCATGCTGCATGCCGCATCGTTATGCATCCGAAGAGATCCTAACGCAAGGCCTCGTATGTCACAGGTTTTACGAATTCTGGAAGGCGACCTCGTCATGGACGCTAATTACTTGTCAACTCCTGGATACGATATGGGAAATCGGAGTGGTCGGATGTGGACCGATCAGCAGCAGCAGCAGCAGCAGCAGCAAAACTACAGTGGCTCATTATCAGATGAGACTCTAGAGAGGTTCAATGAAAAAGTCTGTGTTGAGAGTTTAAGACCAGGTTACTGGGAAAGAGACAAGACAAGGAGGACTTCAAGTGGAAGTGATTTGTAA 2265 44.5 MSREQKRGKQDKGSDDVQKVIVAVKASKEIPKTALVWALTHVVQIGDCITLLVVVPSQSSGRKFWGFPRFAGDCASGHKKAHSGTSSELKCDITDSCSQMILQLHDVYDPNKINVKIKIVSGSPSGSVAAEAKRAQASWVVLDKQLKHEEKCCMEELQCNIVVMKRSQPKVLRLNLVGSPKKEQEVPSPSPSDIDEGSESHQKENNDPLDFIRGPVVTPSSSPELGTPFTVTEAGTSSVSSSDPGTSPFFNSEMNGDTKKEELFVIKENKELDAASSDSDIENLSVSSASLRFQPWMTEFLSSHLQSSQHISGRSQRCDDMNQVSTRKSFLPKSSKLDRESSIGMSSHRSDNDFHGDVRDAVSLSRNTPPGPPPLCSICQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGYGSVHRGVLPDGQVVAVKQHKLASSQGDLEFCSEVEVLSCAQHRNVVMLIGFCIEEKRRLLVYEYICNGSLDSHLYGRQQEPLEWSARQKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELITGRKAVDLSRPKGQQCLTEWARPLLDEFLIDELIDPRLGNNFAEHEVYCMLHAASLCIRRDPNARPRMSQVLRILEGDLVMDANYLSTPGYDMGNRSGRMWTDQQQQQQQQQNYSGSLSDETLERFNEKVCVESLRPGYWERDKTRRTSSGSDL 754
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 28705310 28709382 + CmPI595203_07g013410.1 Cmu07g1341 420892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu07g1341 754 MobiDBLite consensus disorder prediction 329 356 - -
Cmu07g1341 754 FunFam Dual-specific kinase DSK1-like 11 165 - -
Cmu07g1341 754 Gene3D HUPs 3 151 IPR014729 -
Cmu07g1341 754 PANTHER OS01G0750732 PROTEIN 138 706 IPR050885 -
Cmu07g1341 754 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 377 480 - -
Cmu07g1341 754 Pfam Protein tyrosine and serine/threonine kinase 409 673 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu07g1341 754 ProSitePatterns Tyrosine protein kinases specific active-site signature. 526 538 IPR008266 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu07g1341 754 CDD STKc_IRAK 411 677 - -
Cmu07g1341 754 ProSiteProfiles Protein kinase domain profile. 405 686 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu07g1341 754 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 481 684 - -
Cmu07g1341 754 Gene3D Transferase(Phosphotransferase) domain 1 481 685 - -
Cmu07g1341 754 MobiDBLite consensus disorder prediction 220 254 - -
Cmu07g1341 754 MobiDBLite consensus disorder prediction 698 718 - -
Cmu07g1341 754 SUPERFAMILY Protein kinase-like (PK-like) 389 686 IPR011009 -
Cmu07g1341 754 Gene3D Phosphorylase Kinase; domain 1 377 480 - -
Cmu07g1341 754 MobiDBLite consensus disorder prediction 694 718 - -
Cmu07g1341 754 MobiDBLite consensus disorder prediction 342 356 - -
Cmu07g1341 754 MobiDBLite consensus disorder prediction 175 255 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g1986 Cmu-Chr5:29621410 Cmu07g1341 Cmu-Chr7:28705310 5.10E-162 dispersed
Cmu07g1341 Cmu-Chr7:28705310 Cmu11g0233 Cmu-Chr11:2800321 1.60E-86 dispersed
Cmu08g0581 Cmu-Chr8:17981198 Cmu07g1341 Cmu-Chr7:28705310 4.20E-87 transposed
Cmu11g1308 Cmu-Chr11:25278891 Cmu07g1341 Cmu-Chr7:28705310 2.20E-81 transposed
Cmu03g2166 Cmu-Chr3:30155945 Cmu07g1341 Cmu-Chr7:28705310 5.70E-229 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75677 PF07714 PK_Tyr_Ser-Thr 1.20E-40 CL0016 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu07g1341 - - - 0.0