Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu07g1344 ATGGATTGTTTGTGGATATTTGTGCAGCTCATCACAGCTGCAGCTTTCATATCTTCCACAATCATAATCCTGAAAAGCTTCATCAACCCCACCACAGCACCACCATCATCATCTTCAAACTCCCCCTCCTCCAACAATAACCCTTCACTTCCTTCTGGTTCCCTCGGTCTCCCCTTGGTCGGTGAAACCCTCCACTTCGTCTCTTCCGCTTACTCTCACCGCCCCGACACCTTCATGGACACACGTCGCCAACGGTATGGAAAGGTTTTCAAATCACATATATTTGGAAGTCCAACAATAGTTTCAACTGATGCTGAAGTCAATAGGTTTATTCTACAAAGTGATGCAAAGGTTTTTGTACCATCTTATCCAAAATCTGTGACAGAGTTGATGGGAAAATCTTCTATATTGCTCATTAATGGCAGTTTGCATAGAAGAATTCATGGCCTTATTGGAGCATTTTTCAAGTCATCTCATCTCAAAGCTCAAGTAACCATAGACATGCAGAAATATCTTCAAAAATCCATCTCTACTTGGACTAATACTTGTCAACACAATCCTGTCCACATACAAGATGAAGCCAAAAATATTGCCTTTGAAATACTAGTAAAGACACTGATCAGTTTGGAAGCTGGTGAAGAAATGGAATTTCTCAAGAAACAGTTTAATGAATTCATTGCTGGGATTATGGCTTTCCCAATAAACATCCCAGGAAGCAGACTTTACCGATCATTACAGGCGAAAAGGAAAATGGTTAAGTTAGTGAAAGAAATAATAGAAGGAAGAAGAAAGAAGATGGGTGAGAAATTGAATAAGGCAGTCCCATTGAATGATGTTGTGGATGTTTTGGTGAATGATGGAAGCCAACAAGTTACAAATGAACTAATAGCAGATAATATGATTGATATGATGATTCCAGGCCAAGATTCTGTCCCAATTCTTATCACTTTGGCTATTAAATACCTTTCAGATTCCCCATCTGCCCTTCAACGATTAGTGGTCATAACAGAGACGTTAAGGATAGGAAACATAATAACAGGAGTGATGAGAAAGGCGATGAAAGACATTGAGATAAAAGGGTATTTAATACCTAAAGGATGGTGTGTCCTTGCATATATTAGGTCAGTTCATGTTGATGAAAACCACTTCCAAACCCCTTACCATTTCAATCCATGGAGATGGCAGGATAAAGACTCAAACAACTCCAATTTTACTCCTTTTGGAGGAGGACAAAGGTTGTGCCCTGGACTTGAATTAGCTCGACTAGAAGCTTCAATTTTCTTACATCACTTCGTTACTGAATTCAGGTGGGTGGCTGAGGAAGACAATATTATCAACTTCCCAACAGTAAGGATGAAGAACAAAATGACAATTTGGGTCAAGAAGAGAGAGCATTAA 1398 39.48 MDCLWIFVQLITAAAFISSTIIILKSFINPTTAPPSSSSNSPSSNNNPSLPSGSLGLPLVGETLHFVSSAYSHRPDTFMDTRRQRYGKVFKSHIFGSPTIVSTDAEVNRFILQSDAKVFVPSYPKSVTELMGKSSILLINGSLHRRIHGLIGAFFKSSHLKAQVTIDMQKYLQKSISTWTNTCQHNPVHIQDEAKNIAFEILVKTLISLEAGEEMEFLKKQFNEFIAGIMAFPINIPGSRLYRSLQAKRKMVKLVKEIIEGRRKKMGEKLNKAVPLNDVVDVLVNDGSQQVTNELIADNMIDMMIPGQDSVPILITLAIKYLSDSPSALQRLVVITETLRIGNIITGVMRKAMKDIEIKGYLIPKGWCVLAYIRSVHVDENHFQTPYHFNPWRWQDKDSNNSNFTPFGGGQRLCPGLELARLEASIFLHHFVTEFRWVAEEDNIINFPTVRMKNKMTIWVKKREH 465
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 28728087 28733862 - CmPI595203_07g013440.1 Cmu07g1344 420895
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cmu07g1344 465 SUPERFAMILY Cytochrome P450 48 463 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu07g1344 465 Gene3D Cytochrome P450 39 463 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu07g1344 465 CDD CYP90-like 82 458 - -
Cmu07g1344 465 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 407 416 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cmu07g1344 465 PRINTS E-class P450 group I signature 414 437 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu07g1344 465 PRINTS E-class P450 group I signature 404 414 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu07g1344 465 PRINTS E-class P450 group I signature 372 396 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu07g1344 465 PRINTS E-class P450 group I signature 83 102 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu07g1344 465 Pfam Cytochrome P450 334 443 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu07g1344 465 Pfam Cytochrome P450 51 332 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu07g1344 465 PANTHER CYTOCHROME P450 26 50 435 - GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER)|GO:0016709(PANTHER)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g1933 Cmu-Chr1:32689631 Cmu07g1344 Cmu-Chr7:28728087 3.10E-115 dispersed
Cmu07g1344 Cmu-Chr7:28728087 Cmu11g0497 Cmu-Chr11:5421664 1.40E-69 dispersed
Cmu07g1344 Cmu-Chr7:28728087 Cmu09g0055 Cmu-Chr9:798985 1.30E-168 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu07g1344 K12638 - csv:101212581 763.066