Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu07g1365 ATGATGGAAGAGATGTCTCCTGCTGTTTCTTTGACCCTTAGTTTGGGTAATCCAAAGTCTGATAGCTCAGTAAATCCTGGTCATGTCGAATTCACACGGCTAAAGTTAGTGACGGACACAGTAAATTTATTCTCTGCATCGTCCCCTGAGTCAGGTTCTATTGGTAATGGTAGTTGCCATGATTTTAATGGTATAGTTGACAGCATAACTGTGTCACAACCGACTGATAATGGTCAAGGTATCGACAGTTTTTGGGGGTTGTTACCAAAGAATGGCACGAATTTGACCGTAGATAAGGAAGGTGCATCCTTAGCTACTCTGGATGACCCTGATGAAATGATAGACGATGGGTTGTTTGCTATTGATGGCGGTTCAAGTATTAATGTGCAAGAAGTTGTCAAAATTGGAGATGTTGCTAATGGTCATATTGTTGCAAAGGCTATCATCTTGGTGGAATCAGGGAAGATGCCTACTAGTGAACTTATTGTGGCGACAGTAAGCCCAGATTTAGAAGTATCTGCATCGTCAGAGCTAAACGTCCCTGCAGTAGTTTTCCAATCGAAAGGGGGGGATAGTGTTCATAAAGGCATTCGTAGTGTCTTTGAACGCGATTGTATCCCCCTTTGGGGGTCCGTATCAATTTGTGGTAGAAGACCAGAAATGGAAGATGCAATTGCTGCCGTTCCTTGTTTTGCAAAGATTCCTATCAAAATGCTTGTAGGAAATGGTATGCTGAATGGAATGGGTCAAAGTTTAACACATCTCAACAGCCATTTTTTTGGTGTTTATGATGGACATGGGGGCCCTCAGGTTGCTGATTATTGTCGAGAGCGTATACACTTGGCACTAGCTGAAGAGATAAGCGGATTCAAACAAAATCAAAATAATGGAAGCAATGGAGAAAACTGGCAGCAGGATTGGGAGAGAACCTTTTACAATTGTTTTCTTAGGGTTGATGATGAAATAGAAGGAAAAGTTGGTAGAACAGTCCGTGGGAGTGGTGGAGATGTTTCCGATACAAGCTTCGAGCCTGTTGCCCCGGAAACTGTTGGCTCTACGGCTGTTGTTGCATTGGTATGTTCATCACACATCATAGTTGCAAACTGTGGTGATTCAAGAGCAGTCCTATGCCGTGGTAAAGAACCCATGGCTCTATCGGTCGATCACAAACCAAATCGCGAAGATGAATTCACTAGGATTGAATCATCTGGAGGCAAGGTCATCCAGTGGAATGGACATCGCGTGTTTGGAGTTCTTGCAATGTCAAGATCCATTGGTGATAGATATTTGAAACCATGGATTATTCCTGATCCAGAAGTCATGTTCGTTCCTCGTGCGAAAGAAGACGAATGTCTTATTTTAGCCAGTGATGGACTGTGGGATGTGATGACAAATGAGGAAGTCTGTGAAATAGCTCGAAGGCGGATTCTGCTTTGGCACAAGAAACACGGGGCTTCGTCTCTTGCCGATCGGGGCACAGGAGTTGACCCAGCTGCTCAAGCTGCAGCAGATTACCTCTCAATGCTTGCTCTCCAAAAGGGAAGCAAGGACAACATCTCTGTCATTGTAGTGGACTTGAAAGCTCAAAGGAAGTTCAAGACCAAATCTTGA 1611 43.89 MMEEMSPAVSLTLSLGNPKSDSSVNPGHVEFTRLKLVTDTVNLFSASSPESGSIGNGSCHDFNGIVDSITVSQPTDNGQGIDSFWGLLPKNGTNLTVDKEGASLATLDDPDEMIDDGLFAIDGGSSINVQEVVKIGDVANGHIVAKAIILVESGKMPTSELIVATVSPDLEVSASSELNVPAVVFQSKGGDSVHKGIRSVFERDCIPLWGSVSICGRRPEMEDAIAAVPCFAKIPIKMLVGNGMLNGMGQSLTHLNSHFFGVYDGHGGPQVADYCRERIHLALAEEISGFKQNQNNGSNGENWQQDWERTFYNCFLRVDDEIEGKVGRTVRGSGGDVSDTSFEPVAPETVGSTAVVALVCSSHIIVANCGDSRAVLCRGKEPMALSVDHKPNREDEFTRIESSGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPDPEVMFVPRAKEDECLILASDGLWDVMTNEEVCEIARRRILLWHKKHGASSLADRGTGVDPAAQAAADYLSMLALQKGSKDNISVIVVDLKAQRKFKTKS 536
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 28946691 28948860 - CmPI595203_07g013650.1 Cmu07g1365 420916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu07g1365 536 ProSitePatterns PPM-type phosphatase domain signature. 259 267 IPR000222 GO:0043169(InterPro)
Cmu07g1365 536 CDD PP2Cc 210 526 IPR001932 -
Cmu07g1365 536 SMART PP2C_4 198 524 IPR001932 -
Cmu07g1365 536 FunFam Protein phosphatase 2C 16 196 536 - -
Cmu07g1365 536 Gene3D - 195 536 IPR036457 -
Cmu07g1365 536 ProSiteProfiles PPM-type phosphatase domain profile. 208 526 IPR001932 -
Cmu07g1365 536 PANTHER PROTEIN PHOSPHATASE 181 525 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0005634(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cmu07g1365 536 MobiDBLite consensus disorder prediction 10 24 - -
Cmu07g1365 536 SUPERFAMILY PP2C-like 200 527 IPR036457 -
Cmu07g1365 536 MobiDBLite consensus disorder prediction 1 24 - -
Cmu07g1365 536 Pfam Protein phosphatase 2C 236 519 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu03g2210 Cmu-Chr3:30608768 Cmu07g1365 Cmu-Chr7:28946691 4.60E-74 dispersed
Cmu05g0992 Cmu-Chr5:9096777 Cmu07g1365 Cmu-Chr7:28946691 5.00E-58 dispersed
Cmu07g1365 Cmu-Chr7:28946691 Cmu08g0943 Cmu-Chr8:21761824 5.90E-144 dispersed
Cmu07g1365 Cmu-Chr7:28946691 Cmu03g0742 Cmu-Chr3:1593010 1.90E-65 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu07g1365 K14497 - csv:101203499 1011.52