Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu07g1460 ATGGATTCTTCAATTTCCTCATTCCTTCTGTTCTTTTCCTTTTCCCTTCTCTTCATATTTGGTAATTCCTTCGATTTCTACAGCTCCTGCAGCAATCTCTTCAACTGCGGCCACATCACCAACGTCGGCTTCCCATTCTGGGGCGACGGAAGGCCTGCCGGCTGCGGCAATCCGGCCCTGCAATTGGCATGCGATGGAAATAAGACAACGATCGTAATAAAGGAAATCAAATATCAGATTCTCAAATTCAGCGTCGAAAATAATTCCCAAACGCTCACCATCGCCAGAGCCGATTATATGGGTACCCTCTGCCCTAAGAAATTCATCAACACCACAATCGATTACAATCTCTTTGATATAATTCCTACTTACCGCAACATCACCTTGCTATATTGCTCCTCTTCTCCTCTCGCCGGGCAATTTAACTGTCCTGGATATGAGTTCGGCTTCATTGAGGGGAGCCCCATAGGTCCTAGTCTCTGCAATGTTAGCGTGATCGTGCCGGTTTCTTTGAATTTCTTCCCGCCGGTAAGTGATATTGTGAACGCTACTGAGATGTCGATGGCCATCGACGAGGGATTTGAGGTGAGTTTGAAGGATGACGGCGGTGGATGTGGAATTTGTAAGCAGTCGGAGGGGGTTTGCGGTTACGATTTGAGTTCGAATCGGACGACTTGCTATTGTCGCGCCGGCGATTCTATTGATAACGGAGCTTGTAGGAGGCTTCCGGCCGGTGGAGGTCCGGCATCTTCTCCGGGTGGGAATGGATCTAAGAATACATCCCTGATAATAGGCCTTTCTATTGGAGGAGTAACTGTACTAGGCCTATGCTTAGGATGCTTTGCCTTCTACATTACACAACGCAGAAAAAAACATGTTATGAAGTTGAAAAGCAAAGATCTTTCTTCACCTCCTTCAAGTGGAGGCATTCTGACTCCCTCCACCTTTCGCTCTAATAGTATTCCTTCCTATCCTTATTCGAGATCTAATCTCGAAAACGGGAGCTCCTACTTTGGAGCTCAAATCTTTACCTATGCCGAACTCGTGGAAGCAACTCATAATTTTGACCGTTCAAGGGAACTTGGAGATGGTGGTTATGGTACTGTTTACTCTGGAACACTTAGGGATGGAAGGATAGTTGCAGTAAAGCGGCTATACGAGAACAATTATAAACGCGTGGAGCAGTTCACAAATGAAGTTGAGATTCTCTCAAAATTGCAACATCCGAACCTCGTGAAGCTTTACGGATGCACATCGAGACATAGCCGAGAACTCCTCCTTGTATATGAGTACATTCCTAATGGAACAGTGGCTGACCATCTTCATGGAAAACAAGCAAATTCAGGTCTCCTTAGTTGGTCTGTTAGGCTCAAGATTGCTATAGAGACAGCTAATGCACTGGCTTACCTCCATCGCAACGATATCATTCATCGTGATGTCAAGACCAATAACATTCTTCTTGACAACAACTTCAAAGTAAAAGTGGCTGATTTCGGCCTGTCACGGTTATTTCCCCTCGACGTTACTCATGTTTCAACTGCTCCGCAAGGGACACCAGGCTATGTTGATCCCGAATATTATCAATGCTACCAACTTACCGACAAGAGCGACGTGTATAGCTTTGGAGTTGTTTTGGTTGAGCTCATATCGTCGCTGCAGGCAGTTGACATCAACAGGAACAGAAATGATATCAATTTGTCAAATATGGCTATTGATAGAATTCAAAATCATGCATTGGCTGATTTAGTTGATCTAGATCTTGGGTTTGATAGGGATTATGCAGTAAGGTGTATGATAAAGTCAGTGGCAGAGTTGGCTTACCGATGTCTTCAACAGACAAGGGATGTGAGGCCTTCTATGGATGAAGTGCTGGAAATTCTAAAAGAATTAGAGAATGAAGAACTGACTGCTCGTAAAGCAGAAGTGCTAGATATAGGGTCTGATAATGTGAGACTTTTAAGGAATACATCATCTCTGCTTTCACCAGATTCTGCACCAGTGACAGATAAATGGGTGAAGGTCTTGAACAGAACAACTTAA 2040 44.36 MDSSISSFLLFFSFSLLFIFGNSFDFYSSCSNLFNCGHITNVGFPFWGDGRPAGCGNPALQLACDGNKTTIVIKEIKYQILKFSVENNSQTLTIARADYMGTLCPKKFINTTIDYNLFDIIPTYRNITLLYCSSSPLAGQFNCPGYEFGFIEGSPIGPSLCNVSVIVPVSLNFFPPVSDIVNATEMSMAIDEGFEVSLKDDGGGCGICKQSEGVCGYDLSSNRTTCYCRAGDSIDNGACRRLPAGGGPASSPGGNGSKNTSLIIGLSIGGVTVLGLCLGCFAFYITQRRKKHVMKLKSKDLSSPPSSGGILTPSTFRSNSIPSYPYSRSNLENGSSYFGAQIFTYAELVEATHNFDRSRELGDGGYGTVYSGTLRDGRIVAVKRLYENNYKRVEQFTNEVEILSKLQHPNLVKLYGCTSRHSRELLLVYEYIPNGTVADHLHGKQANSGLLSWSVRLKIAIETANALAYLHRNDIIHRDVKTNNILLDNNFKVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYYQCYQLTDKSDVYSFGVVLVELISSLQAVDINRNRNDINLSNMAIDRIQNHALADLVDLDLGFDRDYAVRCMIKSVAELAYRCLQQTRDVRPSMDEVLEILKELENEELTARKAEVLDIGSDNVRLLRNTSSLLSPDSAPVTDKWVKVLNRTT 679
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 29745676 29751476 - CmPI595203_07g014600.1 Cmu07g1460 421011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu07g1460 679 Coils Coil 620 640 - -
Cmu07g1460 679 Gene3D Phosphorylase Kinase; domain 1 328 431 - -
Cmu07g1460 679 CDD STKc_IRAK 361 630 - -
Cmu07g1460 679 Gene3D Transferase(Phosphotransferase) domain 1 432 644 - -
Cmu07g1460 679 ProSiteProfiles Protein kinase domain profile. 355 635 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu07g1460 679 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 332 431 - -
Cmu07g1460 679 SUPERFAMILY Protein kinase-like (PK-like) 336 631 IPR011009 -
Cmu07g1460 679 Pfam Protein kinase domain 356 625 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu07g1460 679 ProSitePatterns Protein kinases ATP-binding region signature. 361 383 IPR017441 GO:0005524(InterPro)
Cmu07g1460 679 SMART serkin_6 355 626 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu07g1460 679 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu07g1460 679 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 24 672 IPR044652 GO:0004672(InterPro)|GO:0016301(PANTHER)|GO:0016310(PANTHER)
Cmu07g1460 679 Pfam Wall-associated receptor kinase C-terminal 160 230 IPR032872 -
Cmu07g1460 679 Pfam Wall-associated receptor kinase galacturonan-binding 30 95 IPR025287 GO:0030247(InterPro)
Cmu07g1460 679 FunFam Wall-associated receptor kinase-like 20 432 640 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu04g1137 Cmu-Chr4:25899363 Cmu07g1460 Cmu-Chr7:29745676 5.40E-119 dispersed
Cmu05g1688 Cmu-Chr5:26966015 Cmu07g1460 Cmu-Chr7:29745676 1.50E-10 dispersed
Cmu07g1460 Cmu-Chr7:29745676 Cmu11g0937 Cmu-Chr11:12850093 1.80E-174 dispersed
Cmu07g1460 Cmu-Chr7:29745676 Cmu06g1524 Cmu-Chr6:26489284 3.40E-136 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75685 PF00069 Pkinase 3.20E-50 CL0016 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu07g1460 - - - 0.0