Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu07g1503 | ATGATTGCGAGCTCTCTTTGCAATGCTTCCGCTCAATTCCCGGCAGAAGTGATGGACGTAGAAACGATGATGGAACAGAAGAGGAGTCTATGCTCTGTTGATGAGAGCGCTCTCACTTCTCTTACATCCAAGCGACCCAAGACTGATTTCTCCATCTCCTCTAAGGAGAGGAAAGACAAACTGGGTGAACGAATTATGGCCTTGCAACAACTTGTTTCACCATACGGAAAGACAGATACGGCATCTGTTCTTCTGGAGGCAATGGAATATATCCAATTCCTTCACGAGCAAGTCAAGGTGTTGAGTGCTCCATATCTCCAAAGCACACCCACTGTTTTGTTGCAGGAGCTGGAGGCATGCAGCCACAGCCTGAGGAGCAGAGGCCTATGTCTTGTTCCAATCTCGTATACTGCTGGAGTTGCGCGCAGCAACGGTGCAGATATTTGGGCTCCTGTGAAGACAATTTCCCCCAAATTTGAGAAGCCTATCTCACCATTCAATTGA | 504 | 47.82 | MIASSLCNASAQFPAEVMDVETMMEQKRSLCSVDESALTSLTSKRPKTDFSISSKERKDKLGERIMALQQLVSPYGKTDTASVLLEAMEYIQFLHEQVKVLSAPYLQSTPTVLLQELEACSHSLRSRGLCLVPISYTAGVARSNGADIWAPVKTISPKFEKPISPFN | 167 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 30224700 | 30228794 | + | CmPI595203_07g015030.1 | Cmu07g1503 | 421054 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu07g1503 | 167 | FunFam | Transcription factor bHLH113 family | 44 | 120 | - | - | |
Cmu07g1503 | 167 | Gene3D | - | 42 | 124 | IPR036638 | GO:0046983(InterPro) | |
Cmu07g1503 | 167 | PANTHER | TRANSCRIPTION FACTOR BHLH83-RELATED | 44 | 136 | IPR045843 | GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0006357(PANTHER) | |
Cmu07g1503 | 167 | SMART | finulus | 53 | 100 | IPR011598 | GO:0046983(InterPro) | |
Cmu07g1503 | 167 | CDD | bHLH_AtbHLH_like | 51 | 102 | IPR045239 | - | |
Cmu07g1503 | 167 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 50 | 108 | IPR036638 | GO:0046983(InterPro) | |
Cmu07g1503 | 167 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 45 | 94 | IPR011598 | GO:0046983(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu07g1503 | Cmu-Chr7:30224700 | Cmu10g1407 | Cmu-Chr10:7613710 | 3.80E-25 | dispersed | |
Cmu07g1503 | Cmu-Chr7:30224700 | Cmu02g0690 | Cmu-Chr2:7059493 | 7.20E-24 | transposed | |
Cmu07g1503 | Cmu-Chr7:30224700 | Cmu01g2186 | Cmu-Chr1:34364493 | 7.20E-24 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu07g1503 | - | - | - | 0.0 |