Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu07g1503 ATGATTGCGAGCTCTCTTTGCAATGCTTCCGCTCAATTCCCGGCAGAAGTGATGGACGTAGAAACGATGATGGAACAGAAGAGGAGTCTATGCTCTGTTGATGAGAGCGCTCTCACTTCTCTTACATCCAAGCGACCCAAGACTGATTTCTCCATCTCCTCTAAGGAGAGGAAAGACAAACTGGGTGAACGAATTATGGCCTTGCAACAACTTGTTTCACCATACGGAAAGACAGATACGGCATCTGTTCTTCTGGAGGCAATGGAATATATCCAATTCCTTCACGAGCAAGTCAAGGTGTTGAGTGCTCCATATCTCCAAAGCACACCCACTGTTTTGTTGCAGGAGCTGGAGGCATGCAGCCACAGCCTGAGGAGCAGAGGCCTATGTCTTGTTCCAATCTCGTATACTGCTGGAGTTGCGCGCAGCAACGGTGCAGATATTTGGGCTCCTGTGAAGACAATTTCCCCCAAATTTGAGAAGCCTATCTCACCATTCAATTGA 504 47.82 MIASSLCNASAQFPAEVMDVETMMEQKRSLCSVDESALTSLTSKRPKTDFSISSKERKDKLGERIMALQQLVSPYGKTDTASVLLEAMEYIQFLHEQVKVLSAPYLQSTPTVLLQELEACSHSLRSRGLCLVPISYTAGVARSNGADIWAPVKTISPKFEKPISPFN 167
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 30224700 30228794 + CmPI595203_07g015030.1 Cmu07g1503 421054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu07g1503 167 FunFam Transcription factor bHLH113 family 44 120 - -
Cmu07g1503 167 Gene3D - 42 124 IPR036638 GO:0046983(InterPro)
Cmu07g1503 167 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 44 136 IPR045843 GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0006357(PANTHER)
Cmu07g1503 167 SMART finulus 53 100 IPR011598 GO:0046983(InterPro)
Cmu07g1503 167 CDD bHLH_AtbHLH_like 51 102 IPR045239 -
Cmu07g1503 167 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 50 108 IPR036638 GO:0046983(InterPro)
Cmu07g1503 167 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 45 94 IPR011598 GO:0046983(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu07g1503 Cmu-Chr7:30224700 Cmu10g1407 Cmu-Chr10:7613710 3.80E-25 dispersed
Cmu07g1503 Cmu-Chr7:30224700 Cmu02g0690 Cmu-Chr2:7059493 7.20E-24 transposed
Cmu07g1503 Cmu-Chr7:30224700 Cmu01g2186 Cmu-Chr1:34364493 7.20E-24 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu07g1503 - - - 0.0