Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu07g1570 ATGATTATGGCTCTTCCCATTTCCAGATTACTCTCTCTCTTTCCCCTTCTACCCATTTTTCTTGCCTTCTCTACCTTTCTTGTTTCAACAGAAGCATATGATCCACTTGATCCAAATGGAAACATTACTATCAAATGGGATATTATGAGCTGGACTGCTGATGGATATGTTGGTGTTGTTACCCTGTATAATTTCCAACAATACCGGCATATTCAAACACCGGGATGGTCTCTCCAATGGAAATGGGCAAAGAAAGAGGTCATATGGAACATGTTGGGAGGCCAAGCAACAGAGCAAGGTGATTGTTCTAGATTTAAAGGGAACATCCCCCATTGCTGCAAGAGGGATCCAACAGTTGTTGACCTATTGCCTGGAACTCCTTATAACCAGCAGATTGCAAATTGCTGCAAAGGTGGAGTTCTTAACTCCTGGGTGCAAGATCCAGCTACTGCAGTGAGCTCATTTCAGCTCACCGTTGGTTCAGCCGGAACCTCGAATAAAACTGTCCGACTGCCAAAGAACTTTACCTTAAAAGCACCTGGACCTGGTTATACCTGTGGACCGGCCAAAATTGTTAAACCGAGCAAATTCGTTTCCCCCGACAAACGGAGAGTTACACAGGCATTGATGACATGGAATGTTACATGCACATATTCACAATTTCTGGCCCAAAAAACTCCTACTTGCTGTGTCTCGCTGTCGTCATTTTACAACGACACAATTGTTTCTTGCCCGAAGTGCTCCTGTGGCTGCCAAGGCAACTTGAATGCACTCCAAAGTTGTGTGGAGCCAAATTCTCCGTATTTAGCCTCTGTTGTTAGCAGTGCTAGTTCTAGCAAGAGCAATTTGACACCACTGGTTCAGTGTACTGGCCATATGTGCCCGATTCGAGTTCACTGGCATGTGAAGCTTAACTATAAGGAGTATTGGAGGGTGAAGATCACAATTACAAACTTCAATTACATGATGAATTATACAAATTGGAACTTAGTTGTTCAACATCCGAACTTCGACAATCTAACACAGATTTTCAGCTTCAACTACCAGTCAATCAATCCGTATGGAACAATAAATGATACTGCAATCCTGTGGGGAGTCAAGTTCTACAACGATTTGCTCATGCAAGCAGGTCCTCTTGGGAATGTGCAGACAGAGCTACTATTCCGGAAGGATCAATCGACTTTCACATTTGACAAAGGCTGGGCTTTTCCTCGGAGGATCTATTTTAATGGCGACAATTGTGTTATGCCACCTCCGGAAGCCTATCCCTACTTACCAAACACAGGTTCTAAGCAAGATGTCTCGATGTTTACTATGCTATTGCTGATTTCCTTGACTCTCTTGTCTTTCCACCATTCGTTTGCATAA 1368 43.42 MIMALPISRLLSLFPLLPIFLAFSTFLVSTEAYDPLDPNGNITIKWDIMSWTADGYVGVVTLYNFQQYRHIQTPGWSLQWKWAKKEVIWNMLGGQATEQGDCSRFKGNIPHCCKRDPTVVDLLPGTPYNQQIANCCKGGVLNSWVQDPATAVSSFQLTVGSAGTSNKTVRLPKNFTLKAPGPGYTCGPAKIVKPSKFVSPDKRRVTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNDTIVSCPKCSCGCQGNLNALQSCVEPNSPYLASVVSSASSSKSNLTPLVQCTGHMCPIRVHWHVKLNYKEYWRVKITITNFNYMMNYTNWNLVVQHPNFDNLTQIFSFNYQSINPYGTINDTAILWGVKFYNDLLMQAGPLGNVQTELLFRKDQSTFTFDKGWAFPRRIYFNGDNCVMPPPEAYPYLPNTGSKQDVSMFTMLLLISLTLLSFHHSFA 455
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 30876701 30879584 + CmPI595203_07g015700.1 Cmu07g1570 421121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu07g1570 455 PIRSF COBRA 6 455 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
Cmu07g1570 455 PANTHER PROTEIN COBRA 22 444 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)|GO:0046658(PANTHER)|GO:0052324(PANTHER)
Cmu07g1570 455 Pfam COBRA-like protein 56 219 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu06g1602 Cmu-Chr6:27226793 Cmu07g1570 Cmu-Chr7:30876701 1.90E-217 dispersed
Cmu07g1570 Cmu-Chr7:30876701 Cmu10g1369 Cmu-Chr10:6686941 5.00E-27 dispersed
Cmu07g1570 Cmu-Chr7:30876701 Cmu07g1571 Cmu-Chr7:30880123 6.40E-184 tandem
Cmu02g0452 Cmu-Chr2:4134377 Cmu07g1570 Cmu-Chr7:30876701 1.40E-117 transposed
Cmu04g1201 Cmu-Chr4:26570437 Cmu07g1570 Cmu-Chr7:30876701 2.20E-150 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu07g1570 - - - 0.0