Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu07g1571 ATGAGGTTGTTCATCTCAGCTGTCTTCCTTTTTGTCTTATTTTCTCATGGAGCTGCATATGATCCGTTGGATCCGAATGGGAACATTACGATCAAATGGGACATCATGTCTTGGACGCCTGATGGCTATGTGGCGGTAGTTACGTTGAACAACTTCCAAATGTACCGGCATATAATGAGCCCTGGTTGGACGATGGGGTGGACTTGGGCAAAAAAGGAAGTGATATGGTCGATGGTGGGGTCGCAGACGACGGAGCAAGGCGACTGCTCCAAGTTCAAAGGAAACATTCCTCACTGCTGCAAGAAAAACCCCACCGTTGTGGATTTGATGCCTGGAGTTCCTTACAACCAACAATTTACAAACTGCTGCAAAGGTGGGGTTGTGCCTGCTTGGGGACAAGACCCTCAAGCTGCTGTTTCAGCCTTTCAGCTTAGTGTTGGCCAAGCAGGTACTTCAAACAAGACTGTCAAGCTCCCCAAGAACTTCACTTTGCTTGGTCCCGGCCCCGGATACACTTGTGGACCTGCAAAGGTTGTGCCTTCCACCACTTTCCTCACACCTGACCGCCGCCGCAAAACTCAAGCTCTGATGACTTGGAACGTGACCTGCACTTACTCTCAGTTTCTAGCAAGAAAGAATCCTAATTGTTGTGTTTCTTTCTCGTCTTTCTACAACGATACGATCACATCTTGTCCGTCTTGCGCCTGTGGTTGCCAAAACAAGAACAACTGTGTCCAGAGTGATTCTAAGATTCTTAAGCTGGTTGGAATCAATACACCAAGGAAAGACAATGCCCCGTTGCTGCATTGCACACATCACATGTGCCCCGTTCGAGTTCACTGGCACGTAAAGCAAAATTACAAAGAATATTGGCGGGTGAAGATCGCCATCACAAACTTCAACTACCGAATGAACTATTCGCTTTGGTCTCTCGTTGTCCAGCACCCAAATCTGAACAATGTAACCCAAGTTTTCAGCTTCGACTACAAACCACTTGTTCCCTATGGATCAATCAATGACACAGGAATGTTTTACGGGATGAAGTTCTATAACGACCTTCTCATGGAAGCGGGGCCATTTGGGAATGTACAATCAGAGGTGTTGCTGCAAAAGGACCAGAACACCTTCACTTTCAAGCAAGGATGGGCATTCCCTCGAAAAGTTTACTTCAATGGTGACGAGTGCATGCTTCCACCACCCGACACATACCCATTCCTGCCAAACACTGCCCGGGAAAGGCCAGTTGCCGTCTCATCTTCAATTGCTTTGCTGCTGCTCTTCATGCTGTTAGCTATTTGCTGA 1302 47.47 MRLFISAVFLFVLFSHGAAYDPLDPNGNITIKWDIMSWTPDGYVAVVTLNNFQMYRHIMSPGWTMGWTWAKKEVIWSMVGSQTTEQGDCSKFKGNIPHCCKKNPTVVDLMPGVPYNQQFTNCCKGGVVPAWGQDPQAAVSAFQLSVGQAGTSNKTVKLPKNFTLLGPGPGYTCGPAKVVPSTTFLTPDRRRKTQALMTWNVTCTYSQFLARKNPNCCVSFSSFYNDTITSCPSCACGCQNKNNCVQSDSKILKLVGINTPRKDNAPLLHCTHHMCPVRVHWHVKQNYKEYWRVKIAITNFNYRMNYSLWSLVVQHPNLNNVTQVFSFDYKPLVPYGSINDTGMFYGMKFYNDLLMEAGPFGNVQSEVLLQKDQNTFTFKQGWAFPRKVYFNGDECMLPPPDTYPFLPNTARERPVAVSSSIALLLLFMLLAIC 433
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 30880123 30881868 - CmPI595203_07g015710.1 Cmu07g1571 421122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu07g1571 433 PIRSF COBRA 1 433 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
Cmu07g1571 433 PANTHER PROTEIN COBRA 6 426 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)|GO:0046658(PANTHER)|GO:0052324(PANTHER)
Cmu07g1571 433 Pfam COBRA-like protein 43 206 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu04g1201 Cmu-Chr4:26570437 Cmu07g1571 Cmu-Chr7:30880123 1.20E-164 dispersed
Cmu06g1601 Cmu-Chr6:27224357 Cmu07g1571 Cmu-Chr7:30880123 1.20E-222 dispersed
Cmu07g1570 Cmu-Chr7:30876701 Cmu07g1571 Cmu-Chr7:30880123 6.40E-184 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu07g1571 - - - 0.0