Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu07g1621 | ATGCCTGCAGACAAACATGATGAGAGACATAATATGATTAAAAATTCTAAAGAAGAGAATTCACCACCTCCAAAACTAGCAGCAGCAGGAGGTTCATCAAGCTCATCGTTGGCGGCGGCCACGCCATGGCTTAGGTTGAAGGATCCGAGGATCGTGCGCGTGTCGCGAGCTTTCGGAGGCAAGGATCGACACAGCAAAGTTTGTACCATAAGAGGGCTGCGCGACAGGCGTGTAAGGCTTTCGGTTTCAACCGCAATTCAGCTCTATGATCTTCAAGACCGGCTTGGGCTTAATCAGCCGAGCAAGGTCGTCGACTGGTTGCTGAACGCCGCCAAGGATGAAATCGACGAACTCCCTCCATTGCCAATCCCATCGGCAAGCCTTGGCCTTCACTATCAATCTATGCTACCACCAACTGTGCACCACCCGCATAGATCAGAGTTCAAAATCAACTGCATCGACAAGGCCGAGGTCAAGGACGAGACCGAATTGGAAAAGCAACAGAAATCAAATAATAATTCTAATAATCCCTCTCATCCTTCTTCCTTCTCAGCCCTTTTGAACAATGTGTCTGCCCCTCCATTTGGGTTTTATTGGGATCATAATCCTCCATCATCATCGACATCATCATCAACAACAACAACAAATAATCTTCCATTTCTTACATCTCAACAACCTCAGGATAATAATAATCTTCATAACTTCAATCATCTCAATTTGTCTTTGCCTTCCCCTTTGTCTCTTGAGTTCAATCACTTGCACCAAAATTTCTTCATTAACAATAATTCTCTCAATAATACACCTCCTAATTTCCACCCCGCTGTTAGGCCTTTTCATTTTAGTATGGCTACCAAATTCCTTTCTCAAGACAAGAATAACAATAATAATGCAGATAATCCTCCAAATAAGGATCATGGCTTTGCTTCTGATGAATGA | 936 | 43.7 | MPADKHDERHNMIKNSKEENSPPPKLAAAGGSSSSSLAAATPWLRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDEIDELPPLPIPSASLGLHYQSMLPPTVHHPHRSEFKINCIDKAEVKDETELEKQQKSNNNSNNPSHPSSFSALLNNVSAPPFGFYWDHNPPSSSTSSSTTTTNNLPFLTSQQPQDNNNLHNFNHLNLSLPSPLSLEFNHLHQNFFINNNSLNNTPPNFHPAVRPFHFSMATKFLSQDKNNNNNADNPPNKDHGFASDE | 311 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 31436716 | 31438226 | - | CmPI595203_07g016210.1 | Cmu07g1621 | 421172 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu07g1621 | 311 | MobiDBLite | consensus disorder prediction | 160 | 185 | - | - | |
Cmu07g1621 | 311 | ProSiteProfiles | TCP domain profile. | 60 | 118 | IPR017887 | - | |
Cmu07g1621 | 311 | MobiDBLite | consensus disorder prediction | 203 | 230 | - | - | |
Cmu07g1621 | 311 | MobiDBLite | consensus disorder prediction | 1 | 16 | - | - | |
Cmu07g1621 | 311 | PANTHER | TRANSCRIPTION FACTOR TCP4-RELATED | 24 | 277 | IPR005333 | GO:0003700(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0043565(PANTHER)|GO:2000032(PANTHER) | |
Cmu07g1621 | 311 | MobiDBLite | consensus disorder prediction | 168 | 185 | - | - | |
Cmu07g1621 | 311 | Pfam | TCP family transcription factor | 60 | 175 | IPR017887 | - | |
Cmu07g1621 | 311 | MobiDBLite | consensus disorder prediction | 289 | 311 | - | - | |
Cmu07g1621 | 311 | MobiDBLite | consensus disorder prediction | 1 | 34 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu01g2415 | Cmu-Chr1:36124161 | Cmu07g1621 | Cmu-Chr7:31436716 | 4.90E-25 | dispersed | |
Cmu03g1267 | Cmu-Chr3:7595355 | Cmu07g1621 | Cmu-Chr7:31436716 | 4.10E-24 | dispersed | |
Cmu04g1211 | Cmu-Chr4:26648504 | Cmu07g1621 | Cmu-Chr7:31436716 | 5.80E-31 | dispersed | |
Cmu06g1607 | Cmu-Chr6:27291453 | Cmu07g1621 | Cmu-Chr7:31436716 | 1.30E-33 | dispersed | |
Cmu07g1621 | Cmu-Chr7:31436716 | Cmu11g1760 | Cmu-Chr11:29736171 | 1.50E-19 | dispersed | |
Cmu11g0546 | Cmu-Chr11:5959838 | Cmu07g1621 | Cmu-Chr7:31436716 | 1.80E-11 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
6595 | PF03634 | TCP | 1.00E-27 | No_clan | Cmu | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu07g1621 | - | - | - | 0.0 |