Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu07g1621 ATGCCTGCAGACAAACATGATGAGAGACATAATATGATTAAAAATTCTAAAGAAGAGAATTCACCACCTCCAAAACTAGCAGCAGCAGGAGGTTCATCAAGCTCATCGTTGGCGGCGGCCACGCCATGGCTTAGGTTGAAGGATCCGAGGATCGTGCGCGTGTCGCGAGCTTTCGGAGGCAAGGATCGACACAGCAAAGTTTGTACCATAAGAGGGCTGCGCGACAGGCGTGTAAGGCTTTCGGTTTCAACCGCAATTCAGCTCTATGATCTTCAAGACCGGCTTGGGCTTAATCAGCCGAGCAAGGTCGTCGACTGGTTGCTGAACGCCGCCAAGGATGAAATCGACGAACTCCCTCCATTGCCAATCCCATCGGCAAGCCTTGGCCTTCACTATCAATCTATGCTACCACCAACTGTGCACCACCCGCATAGATCAGAGTTCAAAATCAACTGCATCGACAAGGCCGAGGTCAAGGACGAGACCGAATTGGAAAAGCAACAGAAATCAAATAATAATTCTAATAATCCCTCTCATCCTTCTTCCTTCTCAGCCCTTTTGAACAATGTGTCTGCCCCTCCATTTGGGTTTTATTGGGATCATAATCCTCCATCATCATCGACATCATCATCAACAACAACAACAAATAATCTTCCATTTCTTACATCTCAACAACCTCAGGATAATAATAATCTTCATAACTTCAATCATCTCAATTTGTCTTTGCCTTCCCCTTTGTCTCTTGAGTTCAATCACTTGCACCAAAATTTCTTCATTAACAATAATTCTCTCAATAATACACCTCCTAATTTCCACCCCGCTGTTAGGCCTTTTCATTTTAGTATGGCTACCAAATTCCTTTCTCAAGACAAGAATAACAATAATAATGCAGATAATCCTCCAAATAAGGATCATGGCTTTGCTTCTGATGAATGA 936 43.7 MPADKHDERHNMIKNSKEENSPPPKLAAAGGSSSSSLAAATPWLRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDEIDELPPLPIPSASLGLHYQSMLPPTVHHPHRSEFKINCIDKAEVKDETELEKQQKSNNNSNNPSHPSSFSALLNNVSAPPFGFYWDHNPPSSSTSSSTTTTNNLPFLTSQQPQDNNNLHNFNHLNLSLPSPLSLEFNHLHQNFFINNNSLNNTPPNFHPAVRPFHFSMATKFLSQDKNNNNNADNPPNKDHGFASDE 311
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 31436716 31438226 - CmPI595203_07g016210.1 Cmu07g1621 421172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu07g1621 311 MobiDBLite consensus disorder prediction 160 185 - -
Cmu07g1621 311 ProSiteProfiles TCP domain profile. 60 118 IPR017887 -
Cmu07g1621 311 MobiDBLite consensus disorder prediction 203 230 - -
Cmu07g1621 311 MobiDBLite consensus disorder prediction 1 16 - -
Cmu07g1621 311 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 24 277 IPR005333 GO:0003700(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0043565(PANTHER)|GO:2000032(PANTHER)
Cmu07g1621 311 MobiDBLite consensus disorder prediction 168 185 - -
Cmu07g1621 311 Pfam TCP family transcription factor 60 175 IPR017887 -
Cmu07g1621 311 MobiDBLite consensus disorder prediction 289 311 - -
Cmu07g1621 311 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g2415 Cmu-Chr1:36124161 Cmu07g1621 Cmu-Chr7:31436716 4.90E-25 dispersed
Cmu03g1267 Cmu-Chr3:7595355 Cmu07g1621 Cmu-Chr7:31436716 4.10E-24 dispersed
Cmu04g1211 Cmu-Chr4:26648504 Cmu07g1621 Cmu-Chr7:31436716 5.80E-31 dispersed
Cmu06g1607 Cmu-Chr6:27291453 Cmu07g1621 Cmu-Chr7:31436716 1.30E-33 dispersed
Cmu07g1621 Cmu-Chr7:31436716 Cmu11g1760 Cmu-Chr11:29736171 1.50E-19 dispersed
Cmu11g0546 Cmu-Chr11:5959838 Cmu07g1621 Cmu-Chr7:31436716 1.80E-11 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
6595 PF03634 TCP 1.00E-27 No_clan Cmu TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu07g1621 - - - 0.0