Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu07g1629 ATGAGCTTCAAACAAAGTCCAGAACCTTCTTCTTCTGATCTGTCAGATCGGGCTTTTGGTTTCAACCACACTTATCGTAGTCGATTCAATCAGATCTACTTCACCCTTCTTACTGCTGATTTTTGTGCTACAATTTCTGATTTTGCAATTGGCGTTTCTCAAGAGGAGGATTCTTTTTTCCCGATGAAGAAGGCCTTTGATCAAACTGTTAGAGACTTGAAAAGAGAGGTCAATAAGACCGTGCTCAAAATCCCTAAAATTGAGCAGAAGGTTTTGGATGCCACTAGCAATGAGCCTTGGGGTCCTCATGGATCCCTTCTTGCAGATATAGCACAGGCAACTAGAAATTATCATGAATATCAAATGATCATGGGAATACTCTGGAAGCGGATTAATGATACCGGAAAGAATTGGAGGCATGTCTACAAGGGTTTGACCGTTTTGGAGTACTTGGTGGGTCATGGGTCAGAGCGTGTCATAGATGACATCAGAGAACATGCATATCAGATATCAACCTTATCTGATTTTCAATACATCGACTCCAATGGGAGGGACCAAGGTAACAATGTTAGAAAGAAATCTCAAAATCTTGTTGCCCTTGTAAATGATAAAGAAAGGATCATTGAGGTCAGACAGAAGGCTGCTGCTAACAGGGACAAGTTTCGCAGCCCATCATCTATGGGCAGTATGTATAGACCAAGTTCAGGAGGATATGATGACCGCTATGAAGGACGATATGGAAGCCGTGATGGAGACAGAAATGTTGATTCTTATGGGAGGGAAAGAGATTATGGTTTTAGAGATGATCGTTCTGGCAGAAATGAGGATTCATATGGTCGTGATTATGAAGAACGCTATAACAGAGATGGTTTTAAGGATGATGATTATCGAGGAAGAAGCCGAAGCATTGATGACTATCAGTATGGTTCAAGGAGCAGGAGCTCTGACAGAGATGGAGAACGTACATTTGATGATGATGGTCAAGCTTCTTCTCGCAACAATGGTGCCAGAGCTGACGAGCAAGCTCAGGATGGAAGGCAGCTTGAACGTAAATTTTCAGAACAGAATATTGGTGCTCTGCCAAGTTATGAAGAAGCTGTGAATGAATCTGGAAGCACTGGGCATAGTCAAAGAGATGTAGAAGCTCCAGCAACTACTGCTCCAAGAACTTTTCCTCCGCCCACGCCCAGTACTCCAAGCCAGCTAACTACTCATGCAACCACCGCATCCCCGCCTACCCAGGGACATGATGGTTCTGATGAATTTGACCCCCGTGGTTCAGTTCCAGTTCCAGCTGCTCCAAATGCCTCGAGTAGTTTGGAGACAAATTTATTTGACTCCTTGGCCTTAGTGCCTGTTGGGCCAGTAACATCCAGTGCAGACTCTGAGTGTCATGTTCAGACAAACTCTGCTGTGGGATCCTATACTCAAACTCAGACTTTTGAAGACCCATTTGGTGACTCCCCTTTTAAAGCCATTTCTTCCTCTGGAGTCCAAGATCAAGCACATTTTCACCGTGGGGAATCATTTTCTGCAGCAACTTACTCCACACCAGACATCCCTGTTCAACCTCAACCGAATTTGCATCACCCTCGTGAAGAAACTCTGCAACATCACAATATTGGTGTACTGGCTGATCTCCTTCCTCCTGAAACTTTACCAGCTGCTGTTTCACAGCCCACATTTACAATATCAAACCAACCAGCACAGCCAAATTTTCAAGCTGCATCTGGCCTGCCTGCACAACCAAATTCTAACTTGGGGAATTATCAGCAAGAGGGAAATACTGGTCCTGTGAATTTTCAAAATCAAACAGAACCAGGGAGAGAGTTCGGCAACGGGATGTCCGTGGCACAGGGAGGAGTACCAGCTCATGTCAATTCATATATGGCTCCTCCAAGTGCTGGACCTAATACCCAGCCCAACAATTTTGGAACAACTCATAATGGTTCTGCAGCTCCCACGAGTTCTCATGTCACACTTCAAACTACAAGACCGCCTGCTCAGCTTGCTAGTGGAAACTTCAATCCGCCACACGGTTCAGTAGCTTCTCAAGTATCTTACCAAGCCTCAAATTTTCCTGTTGTAAAATCCAACGTTGAGGTTATGGGTAGTTTTAATCCTCAGGCAGGAAACTACACAATGACTTCCCAGCAAATTCCTCCAGCCGGATCACTTTCAACTGCATCTCAAGCTTCAAAGAATAAGTTTGAAACCAAGTCCACAGTATGGTCTGACACATTAAGCAGAGGGCTAGTCAATTTAAACATATCTGGACCTAAAGCAAACCCAATGGCGGACATCGGTGTTGATTTTGAAGCCCTCAATAGGAAGGAGAAGAGGATGGAGAAGCCTAGTACAGCTCCAGTGATATCTACCATTAACATGGGTAAAGCTATGGGATCTGGTTCTGGGATAGGCCGAGCCGGTGCTAGTGCACTAAGGCCACCTCCAAATGCAATGTCAGGTTCCGGTTCCGGTTCGGGCATGGGAATGGGCATGGGCATGGGCATGAACCCCAATCTTGGCATGGGCATGGGCATGAGAGGCTATGGAGGTATGAATCAACCCATGGGTGGCATGGGGATGAATATGGGCATGGGGCAACAAGGAATCCCAATGCAGCAACCTCGAGCGAACATGCCCGGTGTATACAACCCGATGATGGGTGCTGGTGGTTATGCTCCTCAACAGCCACCATACGGCAGTTACCGATGA 2718 45.77 MSFKQSPEPSSSDLSDRAFGFNHTYRSRFNQIYFTLLTADFCATISDFAIGVSQEEDSFFPMKKAFDQTVRDLKREVNKTVLKIPKIEQKVLDATSNEPWGPHGSLLADIAQATRNYHEYQMIMGILWKRINDTGKNWRHVYKGLTVLEYLVGHGSERVIDDIREHAYQISTLSDFQYIDSNGRDQGNNVRKKSQNLVALVNDKERIIEVRQKAAANRDKFRSPSSMGSMYRPSSGGYDDRYEGRYGSRDGDRNVDSYGRERDYGFRDDRSGRNEDSYGRDYEERYNRDGFKDDDYRGRSRSIDDYQYGSRSRSSDRDGERTFDDDGQASSRNNGARADEQAQDGRQLERKFSEQNIGALPSYEEAVNESGSTGHSQRDVEAPATTAPRTFPPPTPSTPSQLTTHATTASPPTQGHDGSDEFDPRGSVPVPAAPNASSSLETNLFDSLALVPVGPVTSSADSECHVQTNSAVGSYTQTQTFEDPFGDSPFKAISSSGVQDQAHFHRGESFSAATYSTPDIPVQPQPNLHHPREETLQHHNIGVLADLLPPETLPAAVSQPTFTISNQPAQPNFQAASGLPAQPNSNLGNYQQEGNTGPVNFQNQTEPGREFGNGMSVAQGGVPAHVNSYMAPPSAGPNTQPNNFGTTHNGSAAPTSSHVTLQTTRPPAQLASGNFNPPHGSVASQVSYQASNFPVVKSNVEVMGSFNPQAGNYTMTSQQIPPAGSLSTASQASKNKFETKSTVWSDTLSRGLVNLNISGPKANPMADIGVDFEALNRKEKRMEKPSTAPVISTINMGKAMGSGSGIGRAGASALRPPPNAMSGSGSGSGMGMGMGMGMNPNLGMGMGMRGYGGMNQPMGGMGMNMGMGQQGIPMQQPRANMPGVYNPMMGAGGYAPQQPPYGSYR 905
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 31513072 31520962 - CmPI595203_07g016290.1 Cmu07g1629 421180

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cmu07g1629 905 MobiDBLite consensus disorder prediction 213 348 - -
Cmu07g1629 905 CDD ENTH 87 203 - -
Cmu07g1629 905 SUPERFAMILY ENTH/VHS domain 84 223 IPR008942 -
Cmu07g1629 905 MobiDBLite consensus disorder prediction 238 327 - -
Cmu07g1629 905 MobiDBLite consensus disorder prediction 563 658 - -
Cmu07g1629 905 FunFam Clathrin interactor 1 77 224 - -
Cmu07g1629 905 MobiDBLite consensus disorder prediction 632 658 - -
Cmu07g1629 905 Gene3D - 84 223 IPR008942 -
Cmu07g1629 905 Pfam ENTH domain 86 207 IPR013809 -
Cmu07g1629 905 MobiDBLite consensus disorder prediction 563 610 - -
Cmu07g1629 905 PANTHER EPSIN/ENT-RELATED 62 840 - GO:0005543(PANTHER)|GO:0005768(PANTHER)|GO:0005886(PANTHER)|GO:0006897(PANTHER)|GO:0030125(PANTHER)|GO:0030276(PANTHER)
Cmu07g1629 905 MobiDBLite consensus disorder prediction 400 415 - -
Cmu07g1629 905 MobiDBLite consensus disorder prediction 366 380 - -
Cmu07g1629 905 SMART enth_2 85 211 IPR013809 -
Cmu07g1629 905 MobiDBLite consensus disorder prediction 365 437 - -
Cmu07g1629 905 ProSiteProfiles ENTH domain profile. 79 211 IPR013809 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu07g1629 K12471 - - csv:101208671 1369.76
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu07g1629 Cmu-Chr7:31513072 Cmu08g0395 Cmu-Chr8:12657685 7.90E-133 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi5g1118 . . . . . . . . . . . Cma14g01498 . Car14g01330 . . Cpe03g01258 Bhi01g02630 . . . Hepe05g1275 . . . . . . . . . . . . . . . . Cme07g01854 . . . . . . . . . . Cmo14g01533 . . . . . . . . . . . . . Cla07g01582 Cam07g1679 Cec07g1774 Cco07g1737 Clacu07g1663 Cmu07g1629 Cre07g2003 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003028 1 3 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 4 2 1 1 1 1 2 2 1 1 12 1 2 53