Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu07g1639 ATGGTCACTGCTAATGAGAATCAGAATCCCTCCAACAGGAATCGAAACAAGAAGAAGAAGAAGAAACCACAGTCCAGAGGCAGTGCAAGACTCCACCACCGACTAGCCTTGTGTAGAAGCTCTTCAAAATCAGCATTGTCAGTATGGAGAGTTTCTCCCATTTTCAAATCCCCCGCCATTATTTCCCCCAGATTCTTCTTCTCCACCGCCATGTCCACTTCCGATCACTCTCCCCCTGCCTTCGACCGACCTCGCTCCGTCATCAAGAAGATTCTTGCTAAACTCCAGCACGAAGGCGACGGCGCCGTCGTTCGTCGAGGCATCGGAAGGAATGATTTGAAGAATCTAGATCCATTTCTTATGCTCGATGATTTCTCTGTCAGTCCGCCGGCTGGATTCCCCGATCATCCTCACAGAGGTTTTGAGACAGTGACGTACATGTTACAGGGAGGGATTACCCATCAAGATTTTGCTGGCCACAAGGGTACAATCAGAACAGGGGATGTCCAGTGGATGACAGCAGGAAGAGGTATAATTCATTCAGAAATGCCTGCTGGTGAAGGATCTCAAAAGGGTTTGCAGCTTTGGATCAATCTTGCATCCCATGACAAAATGATGGAGCCAAGGTATCAAGAGATCTCAAACGACAACATTCCAAGAGCGGAGAAAGACGGTGTGGAAGTTCGTGTCATAGCAGGAGAGTCTATGGGAGTTCATTCTCCAATCTACACTAGAACTCCAACTATGTACCTTGACTTTACTTTGAAACCAAGAGCTCAAGTGCATCAAAGCATTCCAGACTCGTGGACGTCTTTCGTGTACATAATAGACGGGGAAGGAGTGTTCGGGTCGCCGAACTCATCGCGGGTGGCGGCTCACCATGTTCTAGTATTGGGAGGTGGAGATGGGGTAAGTGTGTGGAACAGATCTTCAAAACCACTGAGGTTTGTTTTGATTGCAGGGAAGCCCTTGAATGAGCCAATTGTTCAATATGGACCATTTGTTATGAACTCACAATCTGAAATTGACAAAGCAATTGAGGACTATCACTATTCCAAAAATGGGTTTGAAATGGCAAAGTATTGGAGATCTCAGTGA 1098 46.72 MVTANENQNPSNRNRNKKKKKKPQSRGSARLHHRLALCRSSSKSALSVWRVSPIFKSPAIISPRFFFSTAMSTSDHSPPAFDRPRSVIKKILAKLQHEGDGAVVRRGIGRNDLKNLDPFLMLDDFSVSPPAGFPDHPHRGFETVTYMLQGGITHQDFAGHKGTIRTGDVQWMTAGRGIIHSEMPAGEGSQKGLQLWINLASHDKMMEPRYQEISNDNIPRAEKDGVEVRVIAGESMGVHSPIYTRTPTMYLDFTLKPRAQVHQSIPDSWTSFVYIIDGEGVFGSPNSSRVAAHHVLVLGGGDGVSVWNRSSKPLRFVLIAGKPLNEPIVQYGPFVMNSQSEIDKAIEDYHYSKNGFEMAKYWRSQ 365
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 31685129 31690214 + CmPI595203_07g016390.1 Cmu07g1639 421190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu07g1639 365 PANTHER PIRIN-RELATED 71 365 IPR012093 -
Cmu07g1639 365 CDD cupin_pirin_C 247 323 - -
Cmu07g1639 365 MobiDBLite consensus disorder prediction 1 33 - -
Cmu07g1639 365 SUPERFAMILY RmlC-like cupins 85 363 IPR011051 -
Cmu07g1639 365 FunFam pirin 98 230 - -
Cmu07g1639 365 Pfam Pirin C-terminal cupin domain 250 354 IPR008778 -
Cmu07g1639 365 CDD cupin_pirin_N 102 199 - -
Cmu07g1639 365 Gene3D Jelly Rolls 98 350 IPR014710 -
Cmu07g1639 365 MobiDBLite consensus disorder prediction 14 33 - -
Cmu07g1639 365 Pfam Pirin 104 197 IPR003829 -
Cmu07g1639 365 Gene3D Jelly Rolls 219 324 IPR014710 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu07g1639 Cmu-Chr7:31685129 Cmu09g2001 Cmu-Chr9:36097540 1.70E-118 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu07g1639 K06911 - csv:101205861 602.053