Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu07g1658 ATGACCCAGTTGCTGAATCTAGCTCTTGGAGTGGTTTTAGTTGCAGTTTTGGTGATTTTCCTTCTCATCTTCTTGAACAGAAGGGGAAAGGGGAAGGATAATGATGAATACAATGACATAGAGAGAAAACAGGAGAGGGAGAAAGCGGAGGAAGAGAAAGAAGAATTGGTGAGTTTTCAAGGTGGACAGGACCTTACCATTGTGGATATTTTGGAAGCTCCTGGGGAAGTAATTGGGAAAGCCAACCATGGAACTTTGTATAAGGCTTATTTGCAAGGAAGCAACACAGTAAGGCTGCTAAGGTTTCTGAGGCCAGTTTGCACTGCTGGTCTTGAAGACTTTGTCAGTGAAATTGAGTTTTTAGGTTCCATAAGACACCCAAATTTGGTGCCTCTCTTGGGATTCTACTCAGGTCCAAGAGCGGAGAAGCTTCTCATTCATCCATTTTACAGGCGAGGAAATCTAGCTCAGTTCATTAGAGATGGGAATGGCGACTCACACCGATGGGGAGTTATAAACAAGATCTCGATTGGTATTGCGAAAGGATTGGATCATCTTCACACTGGCCTGCAAAAGCCAACAATCCATGGGAATCTTCAATCGAAAAATGTTCTTTTGGATAGGTATTATGAACCGTATGTCTCCGATTTCGGCCTACATCTACTGCTGAATTCCCCATCTGCCCAAGAGGTAGTTGAAGCTTCAGCAGCCAATGGCTACAAAGCTCCTGAGCTGATCAAGATGAAGGATGCAACTGAGGAGACTGACATCTATAGTTATGGGGTGATATTACTCGAGTTACTTTCGGGGAAGGAACCGATCAACGAAAAGCCAAATCCTGATGAGGATTTTTACTTGCCTAACTTTATGAGAAATGCTGTTCTTGGACATAGAATTGCAGATTTGTTCCATCCAGAAATACTTCTGTATAGCAGTATTGATGGAAATCATGTTACTGAAGAAAAGATTCTCAAATTCTTTCAGCTTGCTATGGCTTGTTGTTCTCCTTCTCCTGCTCTTAGACCTAGTATGAAGCAAGTGCTACGGAAGCTCAATGAAATCGGAACGTAG 1071 42.67 MTQLLNLALGVVLVAVLVIFLLIFLNRRGKGKDNDEYNDIERKQEREKAEEEKEELVSFQGGQDLTIVDILEAPGEVIGKANHGTLYKAYLQGSNTVRLLRFLRPVCTAGLEDFVSEIEFLGSIRHPNLVPLLGFYSGPRAEKLLIHPFYRRGNLAQFIRDGNGDSHRWGVINKISIGIAKGLDHLHTGLQKPTIHGNLQSKNVLLDRYYEPYVSDFGLHLLLNSPSAQEVVEASAANGYKAPELIKMKDATEETDIYSYGVILLELLSGKEPINEKPNPDEDFYLPNFMRNAVLGHRIADLFHPEILLYSSIDGNHVTEEKILKFFQLAMACCSPSPALRPSMKQVLRKLNEIGT 356
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 31905568 31906839 - CmPI595203_07g016580.1 Cmu07g1658 421209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu07g1658 356 Coils Coil 34 54 - -
Cmu07g1658 356 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 7 355 IPR052451 -
Cmu07g1658 356 SUPERFAMILY Protein kinase-like (PK-like) 75 351 IPR011009 -
Cmu07g1658 356 Gene3D Transferase(Phosphotransferase) domain 1 151 356 - -
Cmu07g1658 356 Gene3D Phosphorylase Kinase; domain 1 38 149 - -
Cmu07g1658 356 ProSiteProfiles Protein kinase domain profile. 72 356 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu07g1658 356 Pfam Protein tyrosine and serine/threonine kinase 76 351 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu07g1658 Cmu-Chr7:31905568 Cmu09g0886 Cmu-Chr9:8665146 6.60E-59 dispersed
Cmu01g0450 Cmu-Chr1:4674300 Cmu07g1658 Cmu-Chr7:31905568 4.10E-84 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75695 PF07714 PK_Tyr_Ser-Thr 9.10E-31 CL0016 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu07g1658 - - - 0.0