Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu07g1697 ATGATTAAGGCTTTGGCTTTTTGGGTTGGCGTGGAGAAATTGCCAATAAAACTTCTCCACTGGGGCAAGGATGATTATAATTATATCGTTGGAATCGTGGGTCACGATTCTTCTCTTTCCTTCCGCTGCCCCAAATCTACCTCTTCCTCTCAACAGAGTTTCGAAGTTAGGATGGGAGAACTCTATCTTACAATTCTAATATTGGCTTGCCTTCATTATCTTGCACTGTCTGATTTTCAAGGTGATGCACTCTTTGCATTGAAGAATACATTGAATGCAACAGCAAATCAGCTCACAGATTGGAACCCAAATCAAGTCAATCCATGTACTTGGTCCAATGTTATATGTAGTGGAAGCAATGTGATCTCTGTATCCTTGTCCACAATGGGATTTACTGGAACCTTGTCTCCACGAATTGGACTTCTAAAATCACTTTCAACCCTGATTTTGCAGGGAAATTACATAACTGGAGAGATACCTAAGGATTTTGGAAACCTGACAAATTTGGTTAGTTTGGATTTGGGAAATAACAGCCTAACTGGCCAAATACCATCGTCCCTTGGTAACCTTAAGAAACTACAGTTCCTAACTCTGAGTCAAAATCGTCTAACGGGGACTATTCCGGAGTCACTTTCAACCCTTCCTAGCTTGATCAATCTTCTGCTTGATTCAAATGATCTCAGTGGTCCAATTCCGCAGCAGTTATTTCAAGTTCCAAAATTCAACTTTTCTGCAAACAAGTTAAATTGTGGCTGGAAGTCTCTTCATGCCTGTGCTTCAGACAGTACAAACTCAGGTTCTTCAAATAAACCCAAGGTTGGCCTTATAGTTGGAATAATTGCTGGGTTTACCGTTGCTCTTCTTTTGGTGGGAGTATTATTTTTCTTGTCCAAGGGTAGATATAAAAGCTACAAGCGCGAAGTGTTTGTAGATGTTGCAGGTGAAGTTGATCGAAGAATTGCATTTGGTCAGCTGAAAAGATTTGCATGGAGGGAACTACAGCTAGCCACAGACAACTTTAGCGAGAAAAATGTTTTAGGACAAGGAGGCTTTGGAAAGGTGTACAAAGGGGTGCTTGCAGATGGCACCAAAGTTGCTGTGAAACGGTTGACTGATTATGAAAGTCCGGGGGGAGATGCTGCTTTTCAGCGTGAAGTTGAGATGATTAGTGTAGCTGTTCATAGAAATCTGTTGCGTCTCATTGGGTTCTGTACAACTCAGACAGAACGCCTATTGGTGTATCCCTTTATGCAGAACTTGAGTGTTGCCTACCGTCTTCGAGAACTTAAGCCAGGAGAGGCTGTTCTAGATTGGCCTACTCGGAAACGGGTGGCATTGGGCACAGCTCGTGGTTTAGAGTATCTTCATGAACATTGCAACCCAAAGATTATTCATCGAGATGTCAAGGCAGCTAATGTATTGCTTGATGAAGATTTTGAAGCAGTTGTCGGCGATTTTGGCTTAGCAAAGTTGGTTGATGTTAGAAAGACCAATGTCACTACTCAAGTTCGAGGGACAATGGGTCACATAGCACCGGAGTACTTATCTACTGGAAAATCATCCGAAAGGACTGATGTTTTTGGTTATGGTATCATGCTTTTAGAACTTGTAACGGGGCAACGTGCAATCGACTTCTCACGCTTAGAAGAAGAAGACGATGTTTTACTGCTCGACCATGTTAAGAAACTAGAAAGGGAGAAACGACTTGATGCCATTGTTGATCGAAATCTAAAAAACTACAACATTCAAGAGGTGGAGATGATGATTCAAGTCGCATTGCTGTGTACACAGCCATGCTCGGATGACCGCCCAGCAATGTCACAAGTCGTTCGGATGCTCGAGGGAGAGGGATTGGCAGAGAGGTGGGAAGAATGGCAGCATTTGGAGGTGACTCGCAGACAAGAATATGAGAGACTGCAGAGAAGATTTGAATGGGGAGAAGATTCAATACATAGACAGGATGCAATCCAGTTGTCTGGTGGAAGATGA 1989 42.74 MIKALAFWVGVEKLPIKLLHWGKDDYNYIVGIVGHDSSLSFRCPKSTSSSQQSFEVRMGELYLTILILACLHYLALSDFQGDALFALKNTLNATANQLTDWNPNQVNPCTWSNVICSGSNVISVSLSTMGFTGTLSPRIGLLKSLSTLILQGNYITGEIPKDFGNLTNLVSLDLGNNSLTGQIPSSLGNLKKLQFLTLSQNRLTGTIPESLSTLPSLINLLLDSNDLSGPIPQQLFQVPKFNFSANKLNCGWKSLHACASDSTNSGSSNKPKVGLIVGIIAGFTVALLLVGVLFFLSKGRYKSYKREVFVDVAGEVDRRIAFGQLKRFAWRELQLATDNFSEKNVLGQGGFGKVYKGVLADGTKVAVKRLTDYESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTQTERLLVYPFMQNLSVAYRLRELKPGEAVLDWPTRKRVALGTARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRKTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLDAIVDRNLKNYNIQEVEMMIQVALLCTQPCSDDRPAMSQVVRMLEGEGLAERWEEWQHLEVTRRQEYERLQRRFEWGEDSIHRQDAIQLSGGR 662
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 32242753 32253482 + CmPI595203_07g016970.1 Cmu07g1697 421248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu07g1697 662 Pfam Protein tyrosine and serine/threonine kinase 343 613 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu07g1697 662 ProSitePatterns Protein kinases ATP-binding region signature. 346 368 IPR017441 GO:0005524(InterPro)
Cmu07g1697 662 Gene3D Phosphorylase Kinase; domain 1 309 416 - -
Cmu07g1697 662 FunFam Somatic embryogenesis receptor-like kinase 1 417 633 - -
Cmu07g1697 662 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 67 660 - -
Cmu07g1697 662 FunFam Somatic embryogenesis receptor kinase 1 309 416 - -
Cmu07g1697 662 Pfam Leucine rich repeat N-terminal domain 79 117 IPR013210 -
Cmu07g1697 662 FunFam Putative LRR receptor-like serine/threonine-protein kinase 77 260 - -
Cmu07g1697 662 SUPERFAMILY Protein kinase-like (PK-like) 320 614 IPR011009 -
Cmu07g1697 662 Gene3D Ribonuclease Inhibitor 77 259 IPR032675 -
Cmu07g1697 662 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu07g1697 662 SUPERFAMILY L domain-like 80 249 - -
Cmu07g1697 662 ProSiteProfiles Protein kinase domain profile. 340 618 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu07g1697 662 Gene3D Transferase(Phosphotransferase) domain 1 417 633 - -
Cmu07g1697 662 SMART serkin_6 340 613 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu07g1697 662 Pfam Leucine rich repeat 144 203 IPR001611 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu07g1697 Cmu-Chr7:32242753 Cmu08g1721 Cmu-Chr8:28621077 3.20E-123 dispersed
Cmu07g1697 Cmu-Chr7:32242753 Cmu07g1698 Cmu-Chr7:32262047 2.90E-233 tandem
Cmu02g0011 Cmu-Chr2:173787 Cmu07g1697 Cmu-Chr7:32242753 5.70E-175 transposed
Cmu07g0931 Cmu-Chr7:23513581 Cmu07g1697 Cmu-Chr7:32242753 5.10E-139 transposed
Cmu08g0297 Cmu-Chr8:7323144 Cmu07g1697 Cmu-Chr7:32242753 3.30E-138 transposed
Cmu09g1489 Cmu-Chr9:27124074 Cmu07g1697 Cmu-Chr7:32242753 6.70E-119 transposed
Cmu10g1709 Cmu-Chr10:19803611 Cmu07g1697 Cmu-Chr7:32242753 3.40E-127 transposed
Cmu01g0500 Cmu-Chr1:5162057 Cmu07g1697 Cmu-Chr7:32242753 4.50E-40 wgd
Cmu03g2151 Cmu-Chr3:29986813 Cmu07g1697 Cmu-Chr7:32242753 7.00E-62 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75696 PF00069 Pkinase 2.20E-42 CL0016 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu07g1697 - - - 0.0