Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu08g0089 TCCCCATTTTTTCGAGATGACACTAGGCTGCGTGCTCTTCGCTTTCTCGACCACATGCTTGAAAGAGATAACATGCAAAAGTCTGACTTCTTGAAAGCTCTATCTGATATGTGGAAAGATTTTGATTCCCGTATATTGCGCTATAAGGTCCTTCCACCTCTTTGTGCAGAATTACGGAATCTGGTTATGCAGCCTATGATACTTCCCATGGTACTCACAATAGCAGAGTCGCAGGATAAACATGATTTTGAGCTATCAACTTTGCCATCTCTTGTTCCCGTCCTGAGTACTGCTGCAGGTGACACATTGTTGCTGCTTGTGAAGCATGCCGATCTTATAATTAACAAGACCAATCAAGAACAATTAATAACAAATGTCCTGCCGTTGATTGTTCGTGCTTATGATGATAATGATGCTCGCATACAAGAGGAAGTTCTGAGGAAATCAGTTTCCCTTGCTAAGCAACTTGACACACAGTTAGTGAAACAAGCAATTTTGCCTCGTGTTCATGGTTTAGCTCTAAAGACAACAGTTGCTGCGGTTAGAGTCAATGCTTTGCTGTGCTTTGGAGAATTGGTTCAGACGCTTGATAAACATGCAGTTCTAGAAATCTTGCAAACAATTCAACGTTGTACAGCTGTGGACCGATCTGCTCCCACGCTCATGTGTACCCTTGGGGTTGCAAACTCAATCCTTAAGCAGTATGGAATCGAATTTATTGCGGAGCACGTTCTTCCTTTACTCGTACCTCTTCTTACAGCGCAACAATTAAATGTTCAGCAGTTTGCTAAATATATGCTTTTTGTCAAGGACATTCTCAGGAAAATAGAAGAGAAAAGAGGAGTCACTGTTTCTGATTCTGGAATACCGGAGATGAAATCAACTCTGGTTTCTAATGGCCCACTGTCCCAATCATCAAGCAGAGCAGGTGATACCGTCGTTCCAACAATAAAAAGTCGACCTGCTTGGGATGAAGATTGGGGGCCTACTTCTAAGGGACATACACCCCCACAAAATTCTTCTAGCAATATCTCGTCTGCTCCTGTTCTTGGTGGTCAATCCATAACAGGAAATTCTATACAAACAAATTCTGTTGCGACAACATCTCTGTCTAGTAATCAAACTGTTGCATCCTGCCTTCCAGTTAATATTGAGTGGCCTCCTCGGAACTCTACTGGCGGTGCACCTAGAATAGCTGATTCTGGGATGCAAGCAACTACAGGAGCATCATCCACTTCAAACTCAGATGATGTGGACCCTTTTGCTGACTGGCCTCCACGCCCTAGTGGCTCACTAGGAGGTGGTTCCGGAGTTTCCAACAATGGGGCGGTTGGGCCATCCATGAACAAATATGGAACTAGTTCATCCATGAGTACACCAAACAGTTTGAACTCTCAAACAAACAGCAATGCCAGTTGGACCATCAACAACAAAAATACCAGTGAACCGATGAGACAAAGTCATGGAATTTTGACTTTCAACTCAAGCAGTTTGGGGACTGGGGGCCTCAATTCCCAAAGTTCTATTGGATTCCAGAAGCAAAACCAGGGAATATCATCCCAACATGCATATGATGCCCACAAAAAGTTCACTGATCTTGGATCCATATTTGCACCTAGTAAGAATGAGAATAATATTGCTCCTAGACTTGCACCACCTCCCTCAACTGCTGTCGGTAGAGGAAGAGGAAGAGGGAGAGGGGTTTCATCAACATCTCGTTCTACTCAAAACAAATCATCATCCGGACAACCTCCCTTAATGGACTTGCTGTAG 1773 43.65 SPFFRDDTRLRALRFLDHMLERDNMQKSDFLKALSDMWKDFDSRILRYKVLPPLCAELRNLVMQPMILPMVLTIAESQDKHDFELSTLPSLVPVLSTAAGDTLLLLVKHADLIINKTNQEQLITNVLPLIVRAYDDNDARIQEEVLRKSVSLAKQLDTQLVKQAILPRVHGLALKTTVAAVRVNALLCFGELVQTLDKHAVLEILQTIQRCTAVDRSAPTLMCTLGVANSILKQYGIEFIAEHVLPLLVPLLTAQQLNVQQFAKYMLFVKDILRKIEEKRGVTVSDSGIPEMKSTLVSNGPLSQSSSRAGDTVVPTIKSRPAWDEDWGPTSKGHTPPQNSSSNISSAPVLGGQSITGNSIQTNSVATTSLSSNQTVASCLPVNIEWPPRNSTGGAPRIADSGMQATTGASSTSNSDDVDPFADWPPRPSGSLGGGSGVSNNGAVGPSMNKYGTSSSMSTPNSLNSQTNSNASWTINNKNTSEPMRQSHGILTFNSSSLGTGGLNSQSSIGFQKQNQGISSQHAYDAHKKFTDLGSIFAPSKNENNIAPRLAPPPSTAVGRGRGRGRGVSSTSRSTQNKSSSGQPPLMDLL 590
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 1710056 1736507 + CmPI595203_08g000890.1 Cmu08g0089 421575

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cmu08g0089 590 MobiDBLite consensus disorder prediction 293 355 - -
Cmu08g0089 590 MobiDBLite consensus disorder prediction 403 418 - -
Cmu08g0089 590 MobiDBLite consensus disorder prediction 541 590 - -
Cmu08g0089 590 MobiDBLite consensus disorder prediction 293 313 - -
Cmu08g0089 590 MobiDBLite consensus disorder prediction 433 485 - -
Cmu08g0089 590 MobiDBLite consensus disorder prediction 332 355 - -
Cmu08g0089 590 MobiDBLite consensus disorder prediction 567 584 - -
Cmu08g0089 590 SUPERFAMILY ARM repeat 7 265 IPR016024 -
Cmu08g0089 590 PANTHER SCY1-RELATED S/T PROTEIN KINASE-LIKE 1 582 IPR051177 -
Cmu08g0089 590 MobiDBLite consensus disorder prediction 383 485 - -
Cmu08g0089 590 Gene3D - 4 281 IPR011989 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu08g0089 K17541 - - csv:101223115 1009.59
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1355 . . Bda01g00863 . . . . . . . Cma01g00928 . . . . Cpe06g00967 . Bhi04g02176 . . . . . . Cla08g00080 Cam08g0077 Cec08g0174 Cco08g0134 Clacu08g0090 Cmu08g0089 Cre08g0078 . . . . . . . Cme03g00918 Blo17g00141 Blo18g00151 . Bda13g01425 Bpe02g01100 . Bma01g01436 Bma02g00160 . . . . . . . . . . . . . . . . . . . . . . . Lsi08g00243 . Chy03g00268 .
Vvi18g1693 Blo01g01678 . . . Bpe02g00263 . . Bma01g02446 . . Cma01g00863 Cma09g01302 Car01g00792 . . Cpe06g00982 . . . . . . . . Cla08g00080 Cam08g0077 Cec08g0174 Cco08g0134 Clacu08g0090 Cmu08g0089 Cre08g0078 Cone4ag1158 . . . . . . Cme09g00077 . . Bda11g00925 . . . . . . Cmo01g00908 . . . . Car09g01114 . Cpe02g00993 . . . . . . . . . . . . . . Lsi08g00097 . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006310 1 1 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 2 3 1 1 1 1 38