Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu08g0128 ATGGCTCCATCAATTTTTCTTCATGTGTTCTTCTATATGGCTCATTTTTCTTTTGCAGATTCTACAATTTTATATAATGGATTTCGCGAGGCAACAAGATTGATTCTTGATGGCGCGGCGGTTGTTAAGCCGTCTGGTGCCTTACGCCTCACCGACAATTCACAAAATGTAGTAGGCCATGCCTTCTTTCCTGATGCAGTTAAAATGTTTGATAAAAGTTCTCCTTCATATCCCAACGCTTCATCTTTCAGTACAACTTTTGTGTTTGCTATCGAACCTTCAAGCCCTGGCCAAGGTGGGCACGGCTTAGCCTTCACCTTGGCTCCATCAACCAAGTTTGATGGAGCTGAAAGTGGACACTACCTCGGCTTATTCAACCCGGTCAATGATGGAAACCCATCCAACCATATAATCGCTGTCGAATTCGACACTGTTAATGGTCATGGTGAAGGAAGGAATTCCAGAGGAAACCATATTGGGATTAACATCAATGGCATTTCATCAGTTACATCTAGTCCAACTTCTTCTTCCTATTATCTTACTGATGATACAATTTGGAGAGAAATTCAAATTGATTCTGGTGATAAATTCGCTGTTTGGATTGAATATGATGCTCTAAGTAGAATTTTGAACGTCACTATAGGTTTTATGGAGCAAAAGCCAGAAAAGCCACTCATCTCATATCCTATTGATCTAACATCTGTTGTGAAGGAACAAATGTTCGTGGGGTTTGCCGCATCGACCGGGATCGAAACAAGCTCTCATTACATTTTGGGATGGAGCTTTGCAGTCAATGCACCGGCGCGGCAACTGTGGTACTCTCGCCTTCCCGACGGACCAAAAGAACAAAATCTTTCTTCTTCATCCAATAATCCCCAGTTGAAAGTTGTTCTAGCCGTTTCAACTATTGTGGCCATTTTGGGAATTGTTTTCTTAACCTTCTTGTTTATAAGAATGAAGAAGACAGAGAACTTGGAGGACTGGGAAAGAGATTGCCCTCACAGATTCAACTACAAGGATCTTTACACAGCAACTAATGGATTTAATGATAGTGAGCTAATTGGAATTGGGGGATTTGGGTCAGTATATAAAGGCAAGTTACGTTCAACTGGAGCTGAGATTGCTGTGAAGAGAGTCAAACGAAACTCAAGCCAAGGAATGAAGGAATTCGCTGCGGAAATCGAAAGCTTGGGACGATTAAGACACAAGAACTTGGTTAATCTTCAAGGATGGTGCAAGAAAAAGAACGATCTTCTCATAGTTTATGATTATATTCCAAATGGGAGTCTTCATTCTCTTCTCTATACTCCAAAACAGAGCTTGGTATTGAAATGGGAGCAAAGATTCAACATCCTTAAAGGCATTGCTGCAGGATTACTATATCTTCATGAAGATTGGGAGCAAGTAGTGATCCACCGAGACGTAAAGCCAAGCAATGTTCTGATTGACGCTGACATGAATGCCCGGTTGAGCGATTTCGGATTGTCCAGGCAATACGACCACGACGAAATATCACACACGACTCGAGTCGTCGGCACAATAGGCTACATACCACCAGAGTTGTTTCGCACGGGGAAGGCGTCGAAGAGCGCGGATGTGTTTGCATATGGAGTTCTGCTGCTAGAAGTGGCATGTGGAAGAAAGCCTCTAGGATCAAACCAATTCATATTGGTGGACTGGGTGATGGAATGGTATGAAAGAGGGGACATTCTTTATGTGGTTGATTCAAAATTGGATTCAATTTATAAGGTGGAAGAGATGGAGATGGTGTTGCAACTTGGCCTTCTTTGTACGCATTGGAAACTAGAAGCTCGACCGTCAATGAGACAAGTCATGAGGTTCCTTAATGGAGAAGATCCACTTCCTGCATTCGATGCGTGGGCTAGTTCTCAAAGTATCTTCGAACCTACTTCGAGCTTGACAATGAATGATCGCTCATCGGCCCTGTCCATCGGCCTTATCTCCTCTGCCTCCATAAACGTAGGTAGATAG 1992 42.87 MAPSIFLHVFFYMAHFSFADSTILYNGFREATRLILDGAAVVKPSGALRLTDNSQNVVGHAFFPDAVKMFDKSSPSYPNASSFSTTFVFAIEPSSPGQGGHGLAFTLAPSTKFDGAESGHYLGLFNPVNDGNPSNHIIAVEFDTVNGHGEGRNSRGNHIGININGISSVTSSPTSSSYYLTDDTIWREIQIDSGDKFAVWIEYDALSRILNVTIGFMEQKPEKPLISYPIDLTSVVKEQMFVGFAASTGIETSSHYILGWSFAVNAPARQLWYSRLPDGPKEQNLSSSSNNPQLKVVLAVSTIVAILGIVFLTFLFIRMKKTENLEDWERDCPHRFNYKDLYTATNGFNDSELIGIGGFGSVYKGKLRSTGAEIAVKRVKRNSSQGMKEFAAEIESLGRLRHKNLVNLQGWCKKKNDLLIVYDYIPNGSLHSLLYTPKQSLVLKWEQRFNILKGIAAGLLYLHEDWEQVVIHRDVKPSNVLIDADMNARLSDFGLSRQYDHDEISHTTRVVGTIGYIPPELFRTGKASKSADVFAYGVLLLEVACGRKPLGSNQFILVDWVMEWYERGDILYVVDSKLDSIYKVEEMEMVLQLGLLCTHWKLEARPSMRQVMRFLNGEDPLPAFDAWASSQSIFEPTSSLTMNDRSSALSIGLISSASINVGR 663
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2483955 2485946 + CmPI595203_08g001280.1 Cmu08g0128 421614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu08g0128 663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu08g0128 663 Pfam Legume lectin domain 24 271 IPR001220 GO:0030246(InterPro)
Cmu08g0128 663 Pfam Protein kinase domain 349 612 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu08g0128 663 FunFam serine/threonine-protein kinase PBS1-like 317 424 - -
Cmu08g0128 663 SUPERFAMILY Protein kinase-like (PK-like) 332 640 IPR011009 -
Cmu08g0128 663 PANTHER - 27 623 IPR050528 GO:0002229(PANTHER)|GO:0004675(PANTHER)|GO:0005886(PANTHER)|GO:0042742(PANTHER)
Cmu08g0128 663 SMART serkin_6 348 615 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu08g0128 663 CDD lectin_legume_LecRK_Arcelin_ConA 25 265 IPR001220 GO:0030246(InterPro)
Cmu08g0128 663 CDD STKc_IRAK 354 617 - -
Cmu08g0128 663 Gene3D Phosphorylase Kinase; domain 1 333 424 - -
Cmu08g0128 663 FunFam L-type lectin-domain containing receptor kinase V.9 20 267 - -
Cmu08g0128 663 Gene3D Transferase(Phosphotransferase) domain 1 425 620 - -
Cmu08g0128 663 FunFam L-type lectin-domain containing receptor kinase S.4 425 627 - -
Cmu08g0128 663 ProSitePatterns Protein kinases ATP-binding region signature. 354 377 IPR017441 GO:0005524(InterPro)
Cmu08g0128 663 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 280 IPR013320 -
Cmu08g0128 663 ProSiteProfiles Protein kinase domain profile. 348 624 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu08g0128 663 Gene3D - 16 267 - -
Cmu08g0128 663 ProSitePatterns Legume lectins beta-chain signature. 138 144 IPR019825 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu08g0128 Cmu-Chr8:2483955 Cmu10g2940 Cmu-Chr10:35699994 7.60E-226 dispersed
Cmu08g0128 Cmu-Chr8:2483955 Cmu10g2939 Cmu-Chr10:35695123 2.90E-257 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75699 PF00069 Pkinase 8.50E-51 CL0016 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu08g0128 - - - 0.0