Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu08g0150 TCTGTTTTTCCGTTTGCTGCTTCAACTTTGCAGCAATTTACTGGTGCTGTGGCGAAAATGGTTACTGCAGCGGTTGAGAATCGGGGAAGCGATATGGTAATTGAAGGTAACGAACAGAAGCCGAAGAACATTGTGTCTGATGGGTTCGATGCCAATTATCTCAAAATTTACTACGATGGCAAGCATCCGGGCAGTGACCAATCCTATTTTGGCCGAAGAGAGTTTTCATTCACCTTAGATAATGATATTTATCTACGATTCCAATCTTTCAACAGTCTGTCAGAAATGGAAAATTCGATCAAGGAAAAATGTCCATTTAAAATTGATATTGGGCCTGTATACAGCGTGGATCCTGCAAAGAGACATGCATATGCTGGCGATAATGTATTTACTCCAGTGGAGAGAGAGCTGGTTTTTGATATTGATATGACCGATTATGATGATGTTAGATATTGTTGTTCTGGAGCTGATGTTTGCTTGGATTGCTGGCCTTTAATGACAGCTGCTATCAAAGTGATTGATACTACCCTCCGAGATGACTTTGGATTTAACCACATTCTATGGGTATTTAGTGGTCGACGTGGTGTTCACTGTTGGGTCTGTGATGGCAAAGCTAGAAGGTTGTCCAATGAACAGCGAGCTGCCATTGCTGAATATTTCCATTTATATCAGGGTAATGAAAGTAGTCGCAAGAAAATTTCTCTAACTGGTCCAGTTCTTCATCCATTTCTTGCGAGATCATACATAGAAGTTCTCAAGGATAGCTTTGAATCACAATTGCTTTGTAGTCAAAAGATTTTCTCAACTGAGGAGAGATATGAGAAAATATTAGATATGATTCATGATGAATCCATTACTTCAGAGCTTCGGGGAAGGTGGCAAGATAATAGGCGACCCTCTAAAAATGATGTTAACTCAGTACGATGGGAACAACTGAAAAATATGTTGCAATCAGGGAAACATAAGGCACAAGGAATGCGTAGGCATGTTGAAGAGATTGTTTTCTCGTTTACCTACCCCAGGCTTGATTTGGAGGTTACTAAACACATGAACCATCTGCTAAAAGCACCATTCTGTGTTCATCCCAAAACAGGTCGTATCTGTGTCCCTATTGACCCTGAACACTGTGATGAGTTTGATCCTACTACTGTGCCAACTGTTGCCCAGCTCCTAGAAGAACTTAATGCTGCAGACATGGAAGTAGATAGTGAGACTGACTGGGATAGAACCTCACTTGGGGAGTCTATTAGGTTTTTCAGGTCCGCATTTTTACAGCCGTTACTGAAATCATGCAAGGAGGAGATAGAATCTTCGTTCAATGCGAAAGTGCAACAGTCTAAAAATTCTCTGAGTTGGTAG 1359 40.99 SVFPFAASTLQQFTGAVAKMVTAAVENRGSDMVIEGNEQKPKNIVSDGFDANYLKIYYDGKHPGSDQSYFGRREFSFTLDNDIYLRFQSFNSLSEMENSIKEKCPFKIDIGPVYSVDPAKRHAYAGDNVFTPVERELVFDIDMTDYDDVRYCCSGADVCLDCWPLMTAAIKVIDTTLRDDFGFNHILWVFSGRRGVHCWVCDGKARRLSNEQRAAIAEYFHLYQGNESSRKKISLTGPVLHPFLARSYIEVLKDSFESQLLCSQKIFSTEERYEKILDMIHDESITSELRGRWQDNRRPSKNDVNSVRWEQLKNMLQSGKHKAQGMRRHVEEIVFSFTYPRLDLEVTKHMNHLLKAPFCVHPKTGRICVPIDPEHCDEFDPTTVPTVAQLLEELNAADMEVDSETDWDRTSLGESIRFFRSAFLQPLLKSCKEEIESSFNAKVQQSKNSLSW 452
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 2968754 2979663 - CmPI595203_08g001500.1 Cmu08g0150 421636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu08g0150 452 NCBIfam eukaryotic-type DNA primase catalytic subunit PriS 67 391 IPR014052 GO:0003896(InterPro)|GO:0006269(InterPro)
Cmu08g0150 452 Gene3D DNA primase, PRIM domain 42 433 - -
Cmu08g0150 452 PANTHER DNA PRIMASE SMALL SUBUNIT 63 438 - GO:0003896(PANTHER)|GO:0005658(PANTHER)|GO:0006269(PANTHER)
Cmu08g0150 452 FunFam DNA primase 47 433 - -
Cmu08g0150 452 SUPERFAMILY Prim-pol domain 51 398 - -
Cmu08g0150 452 CDD AE_Prim_S 52 381 IPR014052 GO:0003896(InterPro)|GO:0006269(InterPro)
Cmu08g0150 452 Pfam DNA primase small subunit 139 372 IPR002755 GO:0003896(InterPro)|GO:0006269(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu08g0150 K02684 - csv:101203146 846.654