Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu08g0416 ATGATGTTCTTCTGGACGAAGAACAATTCGTCAAATCTCAACTTATTGTTCTTCTCAGAGCTCCAATTCCTTTTCAGTAAAGTGTTCATTCAGAATTGCATCGATATCGTTGTTTTTGTCCGTGATGAATTATTGCTTATTCGCTGCATCTACAGGATTTCTATCGGTTTGGTGATAGGAATTTCTTGCAAATATCGAATTGAAAGGTTCACAACGGCGTCGGCTGTGGAATTGCGTGGTTCTGACTGTTTGGTAGGTCTGGAGTGCTTCCTTAACGTTGTTAGGGCCCTCGGAATGGGATCATGCCTCTCTGGGGACCGGAACAAGCGAACGATCCCTTATTCTGAGCTTGCTTCCACTTCTCGTGATGATGGCGTTATTAGGCGAAGGAATTCCAAGAGGAAGATTACGAGAAAGGGTTCTTCCCCCTCGAATGACTCTTCAAGGGAGATGTCGCTTCATCGAGTTCCCGGCCGGATGTTTTTGAATGGAACAACTGATCATGCCTCGCTCTTTACTAGGCAAGGCAAGAAAGGCGTCAATCAGGATGCTATGATTGTTTGGGAGAATTTTGGTTCAAAAGAAGATACAATATTTTGTGGAGTCTTTGATGGACACGGTCCCTTTGGCCATATGGTTGCAAAGAAAGTCAGAGATTCTCTTCCTCTAAAACTGAATGCTCAGTGGGAGTTGGATGCTACCAGAAAGGAAGGGCAAAATGACATCAGATGTCAAGTGTCTCCACCAATGCTGGTTAACAAGGACTCTGGAACCTCTCATTGTGATCCTGGTCATCAGGGAAGTTACAGTGACATTTATATCATGCTGAAAGAGTCTTTTCTAAAGGCTTTTAAGGTGATGGACAAGGAGCTTAAACTACATCCATATATCGATTGCTATACCAGTGGTACAACATCAGTTGCATTGGTCAAACAGGGTCGGGATCTTATCATTGGAAATGTTGGGGACTCGCGGGCTGTTTTAGGTACCAGAGATGAATCTAACTCTCTCATTGCAGTTCAGTTGACTGTGGACCTCAAGCCAAATCTTCCAAGGGAAGCTGAAAGGATCAGACTTTGCAAAGGAAGAATCTTTGCTCTTCAAAATGAGCCTGAGATTTTTCGGGTTTGGCTTCCCAACAATGATTCTCCTGGGCTTGCTATGGCCAGAGCCTTCGGAGATTTCTGTTTGAAAGATTTTGGTGTGATAGCCGTGCCTGATGTTTCTTATTGTCATCTTACTGAGAACGATGAGTTTGTGGTACTGGCTACCGATGGGGTTTGGGATGTTCTCTCAAACAAAGAGGTTGTGGCAATTGTTGCATCATCTCCGAGATCTTCTGCAGCTCGTATCCTTGTGGACTCAGCTACTCGAGCATGGAGAATAAAGTACCCTACTGCCAAGGTGGATGATTGTGCCGTAGTCTGCCTGTACCTGGACTCTAATGAAAGTACTGCAGTAACAGCTAAAAAAAAAGGAGTTCACCAATGA 1491 44.2 MMFFWTKNNSSNLNLLFFSELQFLFSKVFIQNCIDIVVFVRDELLLIRCIYRISIGLVIGISCKYRIERFTTASAVELRGSDCLVGLECFLNVVRALGMGSCLSGDRNKRTIPYSELASTSRDDGVIRRRNSKRKITRKGSSPSNDSSREMSLHRVPGRMFLNGTTDHASLFTRQGKKGVNQDAMIVWENFGSKEDTIFCGVFDGHGPFGHMVAKKVRDSLPLKLNAQWELDATRKEGQNDIRCQVSPPMLVNKDSGTSHCDPGHQGSYSDIYIMLKESFLKAFKVMDKELKLHPYIDCYTSGTTSVALVKQGRDLIIGNVGDSRAVLGTRDESNSLIAVQLTVDLKPNLPREAERIRLCKGRIFALQNEPEIFRVWLPNNDSPGLAMARAFGDFCLKDFGVIAVPDVSYCHLTENDEFVVLATDGVWDVLSNKEVVAIVASSPRSSAARILVDSATRAWRIKYPTAKVDDCAVVCLYLDSNESTAVTAKKKGVHQ 496
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 13435946 13440131 - CmPI595203_08g004160.1 Cmu08g0416 421902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu08g0416 496 PANTHER PROTEIN PHOSPHATASE 144 477 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cmu08g0416 496 CDD PP2Cc 168 479 IPR001932 -
Cmu08g0416 496 SUPERFAMILY PP2C-like 167 480 IPR036457 -
Cmu08g0416 496 SMART PP2C_4 157 477 IPR001932 -
Cmu08g0416 496 Gene3D - 163 481 IPR036457 -
Cmu08g0416 496 ProSiteProfiles PPM-type phosphatase domain profile. 168 479 IPR001932 -
Cmu08g0416 496 MobiDBLite consensus disorder prediction 128 152 - -
Cmu08g0416 496 Pfam Protein phosphatase 2C 180 453 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu08g0416 Cmu-Chr8:13435946 Cmu11g0993 Cmu-Chr11:15672333 1.90E-141 dispersed
Cmu08g0416 Cmu-Chr8:13435946 Cmu02g1730 Cmu-Chr2:31174190 7.40E-109 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu08g0416 - - - 0.0