Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu08g0502 ATGGCCAATGACCAGCTCCAGCTTCTGACTGTCCTTGACCGTGCAAAGACCCAATTCTACCATTTCACGGCGGTGGTAATCGCCGGAATGGGCTTCTTCACCGATTCCTACGATCTCTTCTGCATCTCTCTCGTCACAAAACTCCTCGGCCGCATTTACTACACCATCGAAGGCTCCCCCCGTCCCGGAACCCTCCCTCCCGCCGTCGCCGCCGCCGTAAACGGCGTCGCCCTCGCCGGCACTCTCGCCGGTCAACTCTTCTTCGGCTGGCTCGGCGACAAGCTCGGCCGGAAGCGCGTCTATGGCCTCACCCTCATCCTCATGGTCGTCTGTTCCATCGCCTCCGGTCTCTCCTTCAGCAGCTCTCCGACCGCCGTCATCACCACTCTCTGTTTCTTCCGATTCTGGCTTGGCTTCGGAATCGGCGGCGACTACCCTTTATCCGCTACCATCATGGCCGAATACTCCAACAAAAAAACCCGAGGTGCCTTCATAGCCGCCGTCTTCGCAATGCAGGGATTTGGAATTCTGGCCGGCGGCACGGTAGCAATTGTAATCTCGTCAATTGTCAAGACCCTTTTTAAAGCTCCACCGTACGCGGTGGACGCCATGAAGTCGACGGTTCCAGAAGCGGATTACGTATGGAGAATTATACTAATGTTGGGTTCTTTGCCTGCGGTTTTAACTTACTATTGGCGGATGAAAATGCCCGAAACGCCGCGTTACACTGCCTTGGTTGCGAACGACAATAAGAAAGCTTGTGACGACATGTCGAAAGTGTTGAATTTGGAAATTGGTCAACATGTGGTAAATGAAACCCAAATTAAAACAGACTCCAACTCGAATTCAAATTCATTTGGGTTTTTTAGTAAGAAATTTATTCAAAGACATGGGATTCATCTTTTAGGAACTGCCACTACTTGGTTTTTAATCGACGTGGCATATTATAGCCAAAATTTATTCCAAAAAGACATTTTTAGTGCCGTGGGTTGGTTGCCACAGCCCAAAACGATGAGTGCTTTAGAAGAGGTTTTCAAAATCGCCAAGGCTCAGACACTTATTGCCCTTTGTGGGACCGTTCCGGGCTATTGGGCCACGGTTCTTCTAATAGACCGGGTTGGTCGGTTTTTTATTCAGGTGGTTGGGTTTTTCTTCATGACGGTTTTTATGTTTGCGCTTGCTATTCCCTACCATCATTGGACCGGGAACCATGTGGGGTTTGTTGTTATGTATGGCCTTACTTTTTTCTTTGCTAATTTTGGTCCTAATGTCCCTGCTGAGATTTTTCCGGCCCGGTTCCGGTCCACTTGTCATGGGATATCGGCTGCAGCTGGGAAAGCCGGAGCTATCTTTGGAGCTTTTGGGTTCTTGTATGCGGCTTCAGGACCCGACAAAGACCGATGCCGGCTACCCACCCGGGATTGGAATGAGGAATTCTTTGATCATTTTGGGAGTTGTTAA 1461 49.9 MANDQLQLLTVLDRAKTQFYHFTAVVIAGMGFFTDSYDLFCISLVTKLLGRIYYTIEGSPRPGTLPPAVAAAVNGVALAGTLAGQLFFGWLGDKLGRKRVYGLTLILMVVCSIASGLSFSSSPTAVITTLCFFRFWLGFGIGGDYPLSATIMAEYSNKKTRGAFIAAVFAMQGFGILAGGTVAIVISSIVKTLFKAPPYAVDAMKSTVPEADYVWRIILMLGSLPAVLTYYWRMKMPETPRYTALVANDNKKACDDMSKVLNLEIGQHVVNETQIKTDSNSNSNSFGFFSKKFIQRHGIHLLGTATTWFLIDVAYYSQNLFQKDIFSAVGWLPQPKTMSALEEVFKIAKAQTLIALCGTVPGYWATVLLIDRVGRFFIQVVGFFFMTVFMFALAIPYHHWTGNHVGFVVMYGLTFFFANFGPNVPAEIFPARFRSTCHGISAAAGKAGAIFGAFGFLYAASGPDKDRCRLPTRDWNEEFFDHFGSC 486
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 16668280 16669740 - CmPI595203_08g005020.1 Cmu08g0502 421988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu08g0502 486 CDD MFS_PhT 25 461 - -
Cmu08g0502 486 Gene3D MFS general substrate transporter like domains 20 266 IPR036259 -
Cmu08g0502 486 Gene3D MFS general substrate transporter like domains 272 467 IPR036259 -
Cmu08g0502 486 FunFam Inorganic phosphate transporter 1-6 20 470 - -
Cmu08g0502 486 SUPERFAMILY MFS general substrate transporter 12 460 IPR036259 -
Cmu08g0502 486 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 486 IPR020846 GO:0022857(InterPro)
Cmu08g0502 486 Pfam Sugar (and other) transporter 26 461 IPR005828 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Cmu08g0502 486 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 15 459 - -
Cmu08g0502 486 NCBIfam phosphate:H+ symporter 12 480 IPR004738 GO:0005315(InterPro)|GO:0006817(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu07g0175 Cmu-Chr7:1720917 Cmu08g0502 Cmu-Chr8:16668280 8.40E-207 dispersed
Cmu08g0502 Cmu-Chr8:16668280 Cmu11g1883 Cmu-Chr11:30884757 2.10E-124 dispersed
Cmu08g0502 Cmu-Chr8:16668280 Cmu07g0156 Cmu-Chr7:1487656 6.20E-201 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu08g0502 K08176 - csv:101205342 829.706