Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu08g0589 ATGAACGATAACATGAAGTTGGAGATTCCACCGCCGTCGTTCCCCGCCGCCACCATCTCAACTGTGCTCCTGCTCCAAGCCTCCAAGGCTCCACCCCTGCAATTCCACGGACGATTCTTCTTTCCTTTTCCCTCTGCCTTTGCTCCCCCTCTTGGGGATGTCGATCAAGAGACCACTCTACGACCGCCTCAACCATCCTCTCCTCCGCCGCCGCTAGTTTCAGAAATTATAATGTCCTCGAGAGATTCTAACGTCCTTTTCAGTGGTGGCGGTATCAGTTTTCTCAATGAAAATCACACTGGAAAGTTCAGCTATGGATATTCTAGTTTCAAGGGCAAAAGGGCTTCGATGGAGGACTTCTATGAAACAAGAATTTCTGAAGTTGATGGGCAGATGGTCGCTTTTTTCGGTGTTTTTGATGGTCATGGAGGTTCCAGAACAGCTGAATACCTTAAGCGCAATCTTTTCAAGAACCTAAGTAGCCATCCAGACTTTATCAAAGACACAAGGACTGCTATTATTGAGGTCTTTAAGCAGACCGATGCCGATTATATCAATGAAGAGAAAGGACAGCAGAAAGATGCTGGGTCAACTGCATCAACTGCTGTATTGTTGGGGGATCGTCTCCTTGTTGCAAATGTTGGGGATTCTAGAGTAGTTGCATCGAGGGCTGGTTCAGCTATTCCCCTCTCTATTGATCACAAACCTGATAGATCAGACGAGCGCGAAAGGATTGAACAAGCTGGAGGGTTCATTCTTTGGGCAGGAACTTGGAGGGTTGGTGGTATTCTAGCAGTTTCACGTGCCTTTGGAGATAAGCTACTCAAACCATTTGTTGTCGCTGATCCCGAAATTAAGGAAGAAGAACTCGAAGGTGTAGATTTTATTATTATTGCAAGCGATGGACTTTGGAATGTCATCTCAAACGAGGAAGCTGTAGCATTGGTACAACACAACCAAGATGCAGAAATGGCATCAAGAAACCTAATCCAAGAAGCTTTTGCTCGAGGGAGTTCCGACAACATTACATGCGTCATTGACGTTCCTGCCCAATCTGTAGATTACTTAATACTTTGCCTTTATGATTATGGCATGCTGATATGTTCCAACTTTTGCTTCAAACTCATGTTGCACATGTCGTTTCAATGGGTGGTTAGCACTCTGGACTTTGAATCCAGCGACCTGGGTTCGACTCCCGGTAGGACCTTTATAATTTTCCATTTTCGCTTTTTGAAAACGGCATCACGGTGGGCCAATCTGAAACCCAGTAAAATTAGTCCATGCCCACGAAATGAAAGGCCCATTCCACAGCCCAAAAGAAGTAGCCGACAAAGCGGTAGAGTACACGTGGCTGTATACAAAAGGGCTGTCTCCACGAAAATGGTGAACGATACTGAGTATTACGACATTCTCGGTGTTCGTTCTTCGGCTTCTGAGGAGGAGATTCGTAAGGCCTATTATCTTAAGGCAAAACAAGTCCATCCGGATAAGAATTTGAATGATCCTCAAGCTGCTGAAAGGTTTCAGGCGTTAGGTGAAGCTTATCAAGTGTTGAGTGATGCAGTCCAAAGAGATGCATATGATAGGAATGGGAAACATAGTATTACTAGGGAATCCATGCTTGACCCTACTGCTGTTTTTGCACTTCTATTTGGGAGTGAATTATTTGAGGACTACATTGGACATTTAGCTGTAGCATCAATGGCCTCATCGGAATTAGAGAGCGAAATTGGCAATCCAGAGAGATTACATGATAAGTTGAAGGCAATCCAGAAAGAAAGAGAAGAAAAACTTGCACGTGTACTCGAGGGTTTTCTTAATCAATATGTTCTAGGTGACAAAGACGGATTCTTACGACATGCTGAATCTGAAGCCAAAAGACTTTCTAATGCGGGTGCTTTTCAGTTGTTACAACTTCAAGATGATATTTGCCGGCAGTTTAAAATGGATGGTAGTGGTCCTGGAAATGATATTGAATCGCATATTCAAGCGAATAAAGACACATTCCTCAATTCTTTGTGGAAGCTTAATGTGGTTGACATAGAACTAACACTTATAAATGTGTGCCAGATAGTGCTACGCGATAATACTGTTAGAAAGGAAGAACTAAAAGCTCGTGCCCTGGCTCTGAAGATTCTTGGAAAGATATTCCAGGAGAAGCAGGCACAAAATGGTGGAACGTCAAGAAAGAAAGGTGCTGCTGCAATAGATGACGACGGAACGAGTTCAGAGAGCAGCGATGATGAGGACGATCCCCGAAGGCCGCTATCATATCGAACTCCTTTTCTTACTCAGGGTATAGGTAAACTCTTCAGATGCCTCTGTAACCCAGCATTTGATGTGGACGATGATGAAATTGTGTATAAAAGCAAATGA 2376 43.9 MNDNMKLEIPPPSFPAATISTVLLLQASKAPPLQFHGRFFFPFPSAFAPPLGDVDQETTLRPPQPSSPPPPLVSEIIMSSRDSNVLFSGGGISFLNENHTGKFSYGYSSFKGKRASMEDFYETRISEVDGQMVAFFGVFDGHGGSRTAEYLKRNLFKNLSSHPDFIKDTRTAIIEVFKQTDADYINEEKGQQKDAGSTASTAVLLGDRLLVANVGDSRVVASRAGSAIPLSIDHKPDRSDERERIEQAGGFILWAGTWRVGGILAVSRAFGDKLLKPFVVADPEIKEEELEGVDFIIIASDGLWNVISNEEAVALVQHNQDAEMASRNLIQEAFARGSSDNITCVIDVPAQSVDYLILCLYDYGMLICSNFCFKLMLHMSFQWVVSTLDFESSDLGSTPGRTFIIFHFRFLKTASRWANLKPSKISPCPRNERPIPQPKRSSRQSGRVHVAVYKRAVSTKMVNDTEYYDILGVRSSASEEEIRKAYYLKAKQVHPDKNLNDPQAAERFQALGEAYQVLSDAVQRDAYDRNGKHSITRESMLDPTAVFALLFGSELFEDYIGHLAVASMASSELESEIGNPERLHDKLKAIQKEREEKLARVLEGFLNQYVLGDKDGFLRHAESEAKRLSNAGAFQLLQLQDDICRQFKMDGSGPGNDIESHIQANKDTFLNSLWKLNVVDIELTLINVCQIVLRDNTVRKEELKARALALKILGKIFQEKQAQNGGTSRKKGAAAIDDDGTSSESSDDEDDPRRPLSYRTPFLTQGIGKLFRCLCNPAFDVDDDEIVYKSK 791
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 18023066 18038161 - CmPI595203_08g005890.1 Cmu08g0589 422075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu08g0589 791 SMART PP2C_4 94 347 IPR001932 -
Cmu08g0589 791 Pfam X-domain of DnaJ-containing 635 725 IPR026894 -
Cmu08g0589 791 Pfam Protein phosphatase 2C 105 342 IPR001932 -
Cmu08g0589 791 ProSiteProfiles dnaJ domain profile. 466 531 IPR001623 -
Cmu08g0589 791 PRINTS DnaJ domain signature 486 501 IPR001623 -
Cmu08g0589 791 PRINTS DnaJ domain signature 503 523 IPR001623 -
Cmu08g0589 791 PRINTS DnaJ domain signature 468 486 IPR001623 -
Cmu08g0589 791 PRINTS DnaJ domain signature 523 542 IPR001623 -
Cmu08g0589 791 MobiDBLite consensus disorder prediction 724 759 - -
Cmu08g0589 791 SUPERFAMILY Chaperone J-domain 460 561 IPR036869 -
Cmu08g0589 791 Gene3D DnaJ domain 452 545 IPR036869 -
Cmu08g0589 791 CDD DnaJ 466 520 IPR001623 -
Cmu08g0589 791 ProSiteProfiles PPM-type phosphatase domain profile. 104 349 IPR001932 -
Cmu08g0589 791 Gene3D - 95 350 IPR036457 -
Cmu08g0589 791 ProSitePatterns Nt-dnaJ domain signature. 508 527 IPR018253 -
Cmu08g0589 791 ProSitePatterns PPM-type phosphatase domain signature. 135 143 IPR000222 GO:0043169(InterPro)
Cmu08g0589 791 SMART dnaj_3 465 523 IPR001623 -
Cmu08g0589 791 SUPERFAMILY PP2C-like 101 346 IPR036457 -
Cmu08g0589 791 Pfam DnaJ domain 466 528 IPR001623 -
Cmu08g0589 791 CDD PP2Cc 103 346 IPR001932 -
Cmu08g0589 791 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 340 631 IPR052423 -
Cmu08g0589 791 MobiDBLite consensus disorder prediction 52 71 - -
Cmu08g0589 791 MobiDBLite consensus disorder prediction 426 445 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g1017 Cmu-Chr5:9365112 Cmu08g0589 Cmu-Chr8:18023066 6.60E-28 dispersed
Cmu05g1641 Cmu-Chr5:26357131 Cmu08g0589 Cmu-Chr8:18023066 5.40E-95 dispersed
Cmu08g0589 Cmu-Chr8:18023066 Cmu11g0419 Cmu-Chr11:4609156 6.80E-64 dispersed
Cmu08g0589 Cmu-Chr8:18023066 Cmu07g0296 Cmu-Chr7:2955514 3.80E-46 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu08g0589 - - - 0.0