Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu08g0594 ATGGCCCTACGAAGATCAGTAATGAAGGCTAATGTCTTAGGATGTAATTCCTTTATCTACAAATATAATGAATCAACGAAGGTGAATTTTGATGAAGAGGAATGGCAATGTGGTAATTTAGATGACAGAGAAGGGGAAATATTAGATCACCGTAGAGGAACAGAAGCGCTGCATGGATGTATGGTAACACATGTTATGCATGCATGCATACTTTCAAGCTGTTTGGAGTTCCTGAGATTCATACGGAACATCGAGGTTCGATTCTCTCGGGAAGATTGTATAATGGTCAGAACCAAGAGGTGTTCCTTCGTTTCGGCTTCTTTTGGTCTCTGGCTTGTGTTTGGGAAAACTGAATACAACATGCTCAGGCTCAAAACTTATCCACTTATATCGCTGCGAGATAATGAATCTGTAGTTTGTAGGGTTGGGTATTGGGAAGAATGCTCTATGGTAACATCGGGGCCACCCACTCCTATGGGTGGTGGTGCGCAGTCTGTTTCACCCTCACTTCTGCGATCTAATTCTGGATTGCTGGGAGTTCAAGGTGGTCTGCTTCCTTCTCAGGCAGCCTTTTCTTCACTTGTATCGCCCCGGAATCAGTTCAATAATATGAATATGCTTGGTAACATGTCCAATGTGTCATCTCTCCTTAATCAATCATTTGGGAATGGGGCTCCTAATGCACATCCTGGTGCGGAGCCGGACCCTCTTTCTGGTGTTGGCAACGGAATGAACTTCAATAATCCTTCATCATCCTTTGTAGCATCCAATATGGCAAACCCCGTTTCGTCTGTCCAAGGGCAGAATCCTCAATTTTCTAACCTTTCTAGCAGCCAGTTGTTATCAGATCAGCAGCAGTCGCAACAACTAGAACCCCAGAACTTCCAACATAGTCAGCAGTCTATGGAACAGTTTTCTGCACTTCAGAGCAATCAACAACCACAATTTCAAGCAATGCGAGGGTTGACTGGTGTTGGACCTGTAAAGTTGGAGCCTCAAGTGACGAGCAATGATCAACATGGACAGCAGCAGCAGCAGCATTTGCAAACTTTGAGAAACCTTGGTCCAGTGAAATTGGAATCACAACGGCTTCAGTCGATGAGAGGTTTGGCACCAGTAAAAATGGAACCCCAACAATCGGACCAGTCATTATTTCAGCAGCAGCAGCAGCAACAACAACATCAACATCAACATCAGCATCAGCATCCACATCAGCAACAACAGCAATCGCAACAATTTCTCCATATGTCTAGACAGTCCTCTCAGGCAGCAGCTGCCCAAATTAATTTAATGCACCAACAAAGGTTTTTGCAATTGCAACAACAACATCAGCAACATCTCCTAAAAAGTATGCCTCCTCAAAGGCCACAATTGCAACAACATTACCAACAGCAGAACCTTTCTCTGAGATCTCCTGTTAAACCAGGATATGAACCTGGAATGTGTGCCCGGCGTCTGACTCATTACATGTATCACCAGCAACACAGACCTGAAGATAACAACATAGATTTCTGGAGGAAATTTGTTAACGAGTACTTTGCACCTCATGCCAAAAAGAAATGGTGTGTGTCCATGTATGGAAGTGGACGACAAACAACAGGAGTTTTTCCTCAGGATGTATGGCATTGTGAAATATGCAACCGCAAGCCTGGGCGTGGCTTTGAAGCTACTGCTGAAGTTCTTCCCAGGCTTTTTAAGATCAAGTATGAAAGTGGTACTATGGAGGAACTACTTTATCTTGACATGCCTCGTGAATATCATAATGCATCTGGTCAGATTGTCTTGGATTATGCAAAAGCGATACAGGAAAGTGTTTTTGAGCAACTTCGTGTTGTCCGCGATGGCCAACTTCGAATTGTTTTTTCTCCAGACCTTAAGATATGTTCATGGGAATTCTGTGCTCGACGCCATGAAGAACTTATTCCTAGGAGATTATTGATACCTCAGGTTAGTCACCTTGGAGCAGCAGCTCAAAAGTACCAGTCTGCCATTCAAAACGCATCATCCAATTTATCAACTCCTGAATTGCAAAACAATTGTAACATGTTTGTGGCTTCAGCACGACAATTAGCTAAAGCCTTGGAAGTTCCGCTGGTAAATGACTTGGGATATACAAAGAGATACGTACGTTGTCTTCAGATATCTGAAGTGGTTAATAGCATGAAGGACTTGATTGATTACAGCAAAGAAACAGGGATTGGGCCAATGGATAGTCTAGCCAAGTTTCCTCGGAGGACTAGTTCATCATCGGGGGTTACAAATCAAGCTCAAATTTCTGATGAGCAGCAACAACAGCAATCATCCATAGCCCAGCACTCGAATAACAACCAGAGTTCTGTCCAGGCTTCTGCGGTGCAGCAGCTTACAGCTAGCAATGGTGTGACCAGTGTAAATAACCCCGCCAACCAACCTTCAACATCAAACTCAGCAAGCACCATTGCTGGTCTTCTTCACCAAAATTCTATGAACTCAAGACAGCAGAACTCTATGGCTAATGCTAGCAACTCATATGGGGGAAGTAATGTTCAGATTCCATCTCCTGGGTCTTCCAGTACAATTCCACCTACGCAACCGAACCCTTCTACATTCCAGCCACCGACTCCCTCATCATCTAACAATCTTTCACAACCATCGCATGCAGCTGCAAAGAATGCCAATCAAATGAGTGCTGCCAATTCTCCGGCAAATATCTCTATGCAACAACCCGCCTTATCTGGAGATGCTGATCCTAGTGATACACAATCCTCAGTGCAAAAGATCTTACAAGAGATGATGATGAATAATCATATGAACGGACCGAATAGTCTGGTTGGTGTCGGTTCGGTGGTCAATGATATGAAAAACGTGAATGGGGTCTTACCTACAAGTAGTACAGGTCTCAACAATGGGAATTGCATGGGCGGAAACGGAGCAACAAACGGTGGCTCAGGGATGGGAGGAGGTGGATATGGATCAATGGGGAGCGGGCTTGGGCAGCCTGCCATGGTTAATGGAATGAGAACTGCAATGGGAAATAACTCCATTATGAATAGACGAATAGGAATGGCATCGTTCGCTCTAGAACAAAGCATGAATGGTCAACCTCAGGATTTGGGAAACCAGCTCCTTAGTGGATTAGGAGCTCATTCATATTATGAGAATTTGCCGATGGCCCTGCAAGAAATGGCAGGCACCACCGCATGGCAAGACAGGTGA 3195 44.41 MALRRSVMKANVLGCNSFIYKYNESTKVNFDEEEWQCGNLDDREGEILDHRRGTEALHGCMVTHVMHACILSSCLEFLRFIRNIEVRFSREDCIMVRTKRCSFVSASFGLWLVFGKTEYNMLRLKTYPLISLRDNESVVCRVGYWEECSMVTSGPPTPMGGGAQSVSPSLLRSNSGLLGVQGGLLPSQAAFSSLVSPRNQFNNMNMLGNMSNVSSLLNQSFGNGAPNAHPGAEPDPLSGVGNGMNFNNPSSSFVASNMANPVSSVQGQNPQFSNLSSSQLLSDQQQSQQLEPQNFQHSQQSMEQFSALQSNQQPQFQAMRGLTGVGPVKLEPQVTSNDQHGQQQQQHLQTLRNLGPVKLESQRLQSMRGLAPVKMEPQQSDQSLFQQQQQQQQHQHQHQHQHPHQQQQQSQQFLHMSRQSSQAAAAQINLMHQQRFLQLQQQHQQHLLKSMPPQRPQLQQHYQQQNLSLRSPVKPGYEPGMCARRLTHYMYHQQHRPEDNNIDFWRKFVNEYFAPHAKKKWCVSMYGSGRQTTGVFPQDVWHCEICNRKPGRGFEATAEVLPRLFKIKYESGTMEELLYLDMPREYHNASGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSHLGAAAQKYQSAIQNASSNLSTPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSKETGIGPMDSLAKFPRRTSSSSGVTNQAQISDEQQQQQSSIAQHSNNNQSSVQASAVQQLTASNGVTSVNNPANQPSTSNSASTIAGLLHQNSMNSRQQNSMANASNSYGGSNVQIPSPGSSSTIPPTQPNPSTFQPPTPSSSNNLSQPSHAAAKNANQMSAANSPANISMQQPALSGDADPSDTQSSVQKILQEMMMNNHMNGPNSLVGVGSVVNDMKNVNGVLPTSSTGLNNGNCMGGNGATNGGSGMGGGGYGSMGSGLGQPAMVNGMRTAMGNNSIMNRRIGMASFALEQSMNGQPQDLGNQLLSGLGAHSYYENLPMALQEMAGTTAWQDR 1064
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 18096999 18105749 - CmPI595203_08g005940.1 Cmu08g0594 422080
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu08g0594 1064 MobiDBLite consensus disorder prediction 742 785 - -
Cmu08g0594 1064 MobiDBLite consensus disorder prediction 221 314 - -
Cmu08g0594 1064 Pfam LIM-domain binding protein 485 739 IPR029005 -
Cmu08g0594 1064 MobiDBLite consensus disorder prediction 327 355 - -
Cmu08g0594 1064 MobiDBLite consensus disorder prediction 330 355 - -
Cmu08g0594 1064 MobiDBLite consensus disorder prediction 376 424 - -
Cmu08g0594 1064 MobiDBLite consensus disorder prediction 241 314 - -
Cmu08g0594 1064 PANTHER LIM DOMAIN-BINDING PROTEIN 150 1006 IPR029005 GO:0000122(PANTHER)|GO:0005634(PANTHER)|GO:0005667(PANTHER)|GO:0045944(PANTHER)
Cmu08g0594 1064 MobiDBLite consensus disorder prediction 824 889 - -
Cmu08g0594 1064 MobiDBLite consensus disorder prediction 374 424 - -
Cmu08g0594 1064 MobiDBLite consensus disorder prediction 851 865 - -
Cmu08g0594 1064 MobiDBLite consensus disorder prediction 824 850 - -
Cmu08g0594 1064 MobiDBLite consensus disorder prediction 866 889 - -
Cmu08g0594 1064 MobiDBLite consensus disorder prediction 735 785 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu08g0275 Cmu-Chr8:6177206 Cmu08g0594 Cmu-Chr8:18096999 1.20E-263 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu08g0594 - - - 0.0