Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu08g0594 | ATGGCCCTACGAAGATCAGTAATGAAGGCTAATGTCTTAGGATGTAATTCCTTTATCTACAAATATAATGAATCAACGAAGGTGAATTTTGATGAAGAGGAATGGCAATGTGGTAATTTAGATGACAGAGAAGGGGAAATATTAGATCACCGTAGAGGAACAGAAGCGCTGCATGGATGTATGGTAACACATGTTATGCATGCATGCATACTTTCAAGCTGTTTGGAGTTCCTGAGATTCATACGGAACATCGAGGTTCGATTCTCTCGGGAAGATTGTATAATGGTCAGAACCAAGAGGTGTTCCTTCGTTTCGGCTTCTTTTGGTCTCTGGCTTGTGTTTGGGAAAACTGAATACAACATGCTCAGGCTCAAAACTTATCCACTTATATCGCTGCGAGATAATGAATCTGTAGTTTGTAGGGTTGGGTATTGGGAAGAATGCTCTATGGTAACATCGGGGCCACCCACTCCTATGGGTGGTGGTGCGCAGTCTGTTTCACCCTCACTTCTGCGATCTAATTCTGGATTGCTGGGAGTTCAAGGTGGTCTGCTTCCTTCTCAGGCAGCCTTTTCTTCACTTGTATCGCCCCGGAATCAGTTCAATAATATGAATATGCTTGGTAACATGTCCAATGTGTCATCTCTCCTTAATCAATCATTTGGGAATGGGGCTCCTAATGCACATCCTGGTGCGGAGCCGGACCCTCTTTCTGGTGTTGGCAACGGAATGAACTTCAATAATCCTTCATCATCCTTTGTAGCATCCAATATGGCAAACCCCGTTTCGTCTGTCCAAGGGCAGAATCCTCAATTTTCTAACCTTTCTAGCAGCCAGTTGTTATCAGATCAGCAGCAGTCGCAACAACTAGAACCCCAGAACTTCCAACATAGTCAGCAGTCTATGGAACAGTTTTCTGCACTTCAGAGCAATCAACAACCACAATTTCAAGCAATGCGAGGGTTGACTGGTGTTGGACCTGTAAAGTTGGAGCCTCAAGTGACGAGCAATGATCAACATGGACAGCAGCAGCAGCAGCATTTGCAAACTTTGAGAAACCTTGGTCCAGTGAAATTGGAATCACAACGGCTTCAGTCGATGAGAGGTTTGGCACCAGTAAAAATGGAACCCCAACAATCGGACCAGTCATTATTTCAGCAGCAGCAGCAGCAACAACAACATCAACATCAACATCAGCATCAGCATCCACATCAGCAACAACAGCAATCGCAACAATTTCTCCATATGTCTAGACAGTCCTCTCAGGCAGCAGCTGCCCAAATTAATTTAATGCACCAACAAAGGTTTTTGCAATTGCAACAACAACATCAGCAACATCTCCTAAAAAGTATGCCTCCTCAAAGGCCACAATTGCAACAACATTACCAACAGCAGAACCTTTCTCTGAGATCTCCTGTTAAACCAGGATATGAACCTGGAATGTGTGCCCGGCGTCTGACTCATTACATGTATCACCAGCAACACAGACCTGAAGATAACAACATAGATTTCTGGAGGAAATTTGTTAACGAGTACTTTGCACCTCATGCCAAAAAGAAATGGTGTGTGTCCATGTATGGAAGTGGACGACAAACAACAGGAGTTTTTCCTCAGGATGTATGGCATTGTGAAATATGCAACCGCAAGCCTGGGCGTGGCTTTGAAGCTACTGCTGAAGTTCTTCCCAGGCTTTTTAAGATCAAGTATGAAAGTGGTACTATGGAGGAACTACTTTATCTTGACATGCCTCGTGAATATCATAATGCATCTGGTCAGATTGTCTTGGATTATGCAAAAGCGATACAGGAAAGTGTTTTTGAGCAACTTCGTGTTGTCCGCGATGGCCAACTTCGAATTGTTTTTTCTCCAGACCTTAAGATATGTTCATGGGAATTCTGTGCTCGACGCCATGAAGAACTTATTCCTAGGAGATTATTGATACCTCAGGTTAGTCACCTTGGAGCAGCAGCTCAAAAGTACCAGTCTGCCATTCAAAACGCATCATCCAATTTATCAACTCCTGAATTGCAAAACAATTGTAACATGTTTGTGGCTTCAGCACGACAATTAGCTAAAGCCTTGGAAGTTCCGCTGGTAAATGACTTGGGATATACAAAGAGATACGTACGTTGTCTTCAGATATCTGAAGTGGTTAATAGCATGAAGGACTTGATTGATTACAGCAAAGAAACAGGGATTGGGCCAATGGATAGTCTAGCCAAGTTTCCTCGGAGGACTAGTTCATCATCGGGGGTTACAAATCAAGCTCAAATTTCTGATGAGCAGCAACAACAGCAATCATCCATAGCCCAGCACTCGAATAACAACCAGAGTTCTGTCCAGGCTTCTGCGGTGCAGCAGCTTACAGCTAGCAATGGTGTGACCAGTGTAAATAACCCCGCCAACCAACCTTCAACATCAAACTCAGCAAGCACCATTGCTGGTCTTCTTCACCAAAATTCTATGAACTCAAGACAGCAGAACTCTATGGCTAATGCTAGCAACTCATATGGGGGAAGTAATGTTCAGATTCCATCTCCTGGGTCTTCCAGTACAATTCCACCTACGCAACCGAACCCTTCTACATTCCAGCCACCGACTCCCTCATCATCTAACAATCTTTCACAACCATCGCATGCAGCTGCAAAGAATGCCAATCAAATGAGTGCTGCCAATTCTCCGGCAAATATCTCTATGCAACAACCCGCCTTATCTGGAGATGCTGATCCTAGTGATACACAATCCTCAGTGCAAAAGATCTTACAAGAGATGATGATGAATAATCATATGAACGGACCGAATAGTCTGGTTGGTGTCGGTTCGGTGGTCAATGATATGAAAAACGTGAATGGGGTCTTACCTACAAGTAGTACAGGTCTCAACAATGGGAATTGCATGGGCGGAAACGGAGCAACAAACGGTGGCTCAGGGATGGGAGGAGGTGGATATGGATCAATGGGGAGCGGGCTTGGGCAGCCTGCCATGGTTAATGGAATGAGAACTGCAATGGGAAATAACTCCATTATGAATAGACGAATAGGAATGGCATCGTTCGCTCTAGAACAAAGCATGAATGGTCAACCTCAGGATTTGGGAAACCAGCTCCTTAGTGGATTAGGAGCTCATTCATATTATGAGAATTTGCCGATGGCCCTGCAAGAAATGGCAGGCACCACCGCATGGCAAGACAGGTGA | 3195 | 44.41 | MALRRSVMKANVLGCNSFIYKYNESTKVNFDEEEWQCGNLDDREGEILDHRRGTEALHGCMVTHVMHACILSSCLEFLRFIRNIEVRFSREDCIMVRTKRCSFVSASFGLWLVFGKTEYNMLRLKTYPLISLRDNESVVCRVGYWEECSMVTSGPPTPMGGGAQSVSPSLLRSNSGLLGVQGGLLPSQAAFSSLVSPRNQFNNMNMLGNMSNVSSLLNQSFGNGAPNAHPGAEPDPLSGVGNGMNFNNPSSSFVASNMANPVSSVQGQNPQFSNLSSSQLLSDQQQSQQLEPQNFQHSQQSMEQFSALQSNQQPQFQAMRGLTGVGPVKLEPQVTSNDQHGQQQQQHLQTLRNLGPVKLESQRLQSMRGLAPVKMEPQQSDQSLFQQQQQQQQHQHQHQHQHPHQQQQQSQQFLHMSRQSSQAAAAQINLMHQQRFLQLQQQHQQHLLKSMPPQRPQLQQHYQQQNLSLRSPVKPGYEPGMCARRLTHYMYHQQHRPEDNNIDFWRKFVNEYFAPHAKKKWCVSMYGSGRQTTGVFPQDVWHCEICNRKPGRGFEATAEVLPRLFKIKYESGTMEELLYLDMPREYHNASGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSHLGAAAQKYQSAIQNASSNLSTPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSKETGIGPMDSLAKFPRRTSSSSGVTNQAQISDEQQQQQSSIAQHSNNNQSSVQASAVQQLTASNGVTSVNNPANQPSTSNSASTIAGLLHQNSMNSRQQNSMANASNSYGGSNVQIPSPGSSSTIPPTQPNPSTFQPPTPSSSNNLSQPSHAAAKNANQMSAANSPANISMQQPALSGDADPSDTQSSVQKILQEMMMNNHMNGPNSLVGVGSVVNDMKNVNGVLPTSSTGLNNGNCMGGNGATNGGSGMGGGGYGSMGSGLGQPAMVNGMRTAMGNNSIMNRRIGMASFALEQSMNGQPQDLGNQLLSGLGAHSYYENLPMALQEMAGTTAWQDR | 1064 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 18096999 | 18105749 | - | CmPI595203_08g005940.1 | Cmu08g0594 | 422080 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu08g0594 | 1064 | MobiDBLite | consensus disorder prediction | 742 | 785 | - | - | |
Cmu08g0594 | 1064 | MobiDBLite | consensus disorder prediction | 221 | 314 | - | - | |
Cmu08g0594 | 1064 | Pfam | LIM-domain binding protein | 485 | 739 | IPR029005 | - | |
Cmu08g0594 | 1064 | MobiDBLite | consensus disorder prediction | 327 | 355 | - | - | |
Cmu08g0594 | 1064 | MobiDBLite | consensus disorder prediction | 330 | 355 | - | - | |
Cmu08g0594 | 1064 | MobiDBLite | consensus disorder prediction | 376 | 424 | - | - | |
Cmu08g0594 | 1064 | MobiDBLite | consensus disorder prediction | 241 | 314 | - | - | |
Cmu08g0594 | 1064 | PANTHER | LIM DOMAIN-BINDING PROTEIN | 150 | 1006 | IPR029005 | GO:0000122(PANTHER)|GO:0005634(PANTHER)|GO:0005667(PANTHER)|GO:0045944(PANTHER) | |
Cmu08g0594 | 1064 | MobiDBLite | consensus disorder prediction | 824 | 889 | - | - | |
Cmu08g0594 | 1064 | MobiDBLite | consensus disorder prediction | 374 | 424 | - | - | |
Cmu08g0594 | 1064 | MobiDBLite | consensus disorder prediction | 851 | 865 | - | - | |
Cmu08g0594 | 1064 | MobiDBLite | consensus disorder prediction | 824 | 850 | - | - | |
Cmu08g0594 | 1064 | MobiDBLite | consensus disorder prediction | 866 | 889 | - | - | |
Cmu08g0594 | 1064 | MobiDBLite | consensus disorder prediction | 735 | 785 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu08g0275 | Cmu-Chr8:6177206 | Cmu08g0594 | Cmu-Chr8:18096999 | 1.20E-263 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu08g0594 | - | - | - | 0.0 |