Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu08g0613 ATGTTGATGAACTCATCTTCTTCTCCGATCATCTTCTTCTTCTTGATTCTCTCCCACTTCCCCCTTCTTTCTCTTTCTTTCTCTCCGAATCAAAACATTACCCTCTCCGGCGATGCCCATCTCAGAAACAACGCCATTTTCCTCACTCAAGAACTCAATTGCCTTCCCTTTTCTTCTAATTCCTCTTCCTCTTCTGGCTTCGGCACCGCCTTCTACATAAACCCTATTCGCTTTCTTGATTCCTCCACCAACTCCACCGCTTCTTTCTCCTCTCGCTTCTCCCTCTCCATCCTCCCCACCCCACTTTGCCCTTTCGCCGACGGAATCGCTTTCCTCATCACCTCCGATTCCAAATCTTTCAGCCGTTCTTATGGTTATATGGGCCTCCCCGACCCCCCTCTTAACTCCCATTACTCGTTCGTCGCTGTCGAATTCGACACCAATTTCGACCCTAATCTCGGTGACATTAACGACAACCATCTCGGCCTCGATGTCAATTCAGCTACCTCTTTGACCTCTGTGGATTTTGGGTCCAGAGGCATTGTTCTCAAAAATGGCAGACAGATTACTGCTTGGATTGAGTACAGAGATGACTCGAAAACGATCCAGGTTTGGGTTGGTTATTCTCAAACAAGGCCTGTAAATCCTCTTCTAGTTGCGCAGGTTGACCTTTCTAAGCAATTTAAAGAGTTTATGTATGTGGGATTCTCTGCTTCTAATGGACAGGGCTCTGCTCTTTACATTGTTGATAGATGGAGATTCAGAACTTTTGGGTTGATTCCTTCATTGAGTCCTGTTGATACTATTAATGAAGGAAATTGTTTTATGTGTTCGTCAGAGGATTCGAATTCTAGTAGTAGTCGTTTTGTTGATGTTCGTAAAAGGAGGAAGAAGATTGGAGAGATGACTCTTGGATTGGGAGGTTTGGCTGCATTTGTCTGTTCTATTACTGCAATTTTTGGGTTGGTTAGCTTTGTTTTGATAAAGAAGTTGAGAGGAAGAATGTGTAGAGGCAGAGCAATCCACAGAACTTGTCAAGTTGAGATGAACAGAGTTCCAACAAGATTGTCTCTTGGGGAGATAAAGTTAGCTACAATGGGTTTTAATCAAAATAGAGTTGTTGGGGAAGGTGGTTCTGCAACTGTTTACAAAGGGTCTCTTGCATCAGGTGGAGAAGTGGCTGTTAAACGTTTCGAGCGAGGCACGGCGAACAACCGTCTATGCAATCCTTTCACGACAGAGTTTGCAACGATGGCGGGATGCTTACGACACAAGAATTTGGTTCAGCTGCATGGATGGTGTTGTGAAGCAAATGAATTGGTGCTTGTTTATGAGTATTTAGCCAATGGAAGCCTTGCCAAACTTCTTCACAACACATCCCCCAATTCACAATTTGTTCTTCCTTGGAAGAAGAGGTTTTCCGTAGTTCTTGGGGTTGCTTCTGCATTGACATATCTCCATGAAGAGTGTGAAAGCCAAATTATCCATAGAGATGTCAAGACTTGCAACATTATGCTTGATGCAGACTTCAATGCGAAACTCGGGGATTTCGGTCTAGCAGAAGTGTATGAACACAGTTCGATCACAAGGGAAGCAACCATACCGGCTGGAACAATGGGCTATCTTGCACCTGAATACGTTTATTCCGGTGTTCCCACCGTGAAAACTGATGTTTACAGCTTTGGTGTGGTGATGCTTGAAGTTGCGTCAGGAAGGAGGCCTGTAAATGTAGACGGGACAGTGCTTGTCGATTGGATTTGGGATTTATGGGAAGTGGGGAAACTGATTGAAGCATCTGATTCAAGGTTGATGGGAAACTACAACATAGTAGAAATGGAGAGAATGCTAATGGTAGGACTTTTTTGTGTACATCCAAATCATGAAAAGAGACCAACTGTGAAAGAAGCTGCAAGAATTCTTAAAGGGGAAGCACCATTCCCAGTACTGCCATCAAGGAAACCAAGGGTCAACATTAGGCCTGTTTTTCCTGATGATTCTGAAGACATAGAGAATCCTTGTGCCGATTATCTCGCCTTCGACGAATCGGCATGGATGACCCCCAAGAGTCAGTTTAGTTAG 2079 44.2 MLMNSSSSPIIFFFLILSHFPLLSLSFSPNQNITLSGDAHLRNNAIFLTQELNCLPFSSNSSSSSGFGTAFYINPIRFLDSSTNSTASFSSRFSLSILPTPLCPFADGIAFLITSDSKSFSRSYGYMGLPDPPLNSHYSFVAVEFDTNFDPNLGDINDNHLGLDVNSATSLTSVDFGSRGIVLKNGRQITAWIEYRDDSKTIQVWVGYSQTRPVNPLLVAQVDLSKQFKEFMYVGFSASNGQGSALYIVDRWRFRTFGLIPSLSPVDTINEGNCFMCSSEDSNSSSSRFVDVRKRRKKIGEMTLGLGGLAAFVCSITAIFGLVSFVLIKKLRGRMCRGRAIHRTCQVEMNRVPTRLSLGEIKLATMGFNQNRVVGEGGSATVYKGSLASGGEVAVKRFERGTANNRLCNPFTTEFATMAGCLRHKNLVQLHGWCCEANELVLVYEYLANGSLAKLLHNTSPNSQFVLPWKKRFSVVLGVASALTYLHEECESQIIHRDVKTCNIMLDADFNAKLGDFGLAEVYEHSSITREATIPAGTMGYLAPEYVYSGVPTVKTDVYSFGVVMLEVASGRRPVNVDGTVLVDWIWDLWEVGKLIEASDSRLMGNYNIVEMERMLMVGLFCVHPNHEKRPTVKEAARILKGEAPFPVLPSRKPRVNIRPVFPDDSEDIENPCADYLAFDESAWMTPKSQFS 692
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 18320919 18322997 - CmPI595203_08g006130.1 Cmu08g0613 422099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu08g0613 692 FunFam L-type lectin-domain containing receptor kinase S.6 336 446 - -
Cmu08g0613 692 Gene3D Phosphorylase Kinase; domain 1 333 446 - -
Cmu08g0613 692 ProSitePatterns Protein kinases ATP-binding region signature. 374 396 IPR017441 GO:0005524(InterPro)
Cmu08g0613 692 ProSitePatterns Legume lectins beta-chain signature. 141 147 IPR019825 -
Cmu08g0613 692 ProSiteProfiles Protein kinase domain profile. 368 647 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu08g0613 692 CDD lectin_legume_LecRK_Arcelin_ConA 26 258 IPR001220 GO:0030246(InterPro)
Cmu08g0613 692 Gene3D - 22 260 - -
Cmu08g0613 692 Gene3D Transferase(Phosphotransferase) domain 1 447 645 - -
Cmu08g0613 692 ProSitePatterns Serine/Threonine protein kinases active-site signature. 494 506 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu08g0613 692 SUPERFAMILY Protein kinase-like (PK-like) 348 640 IPR011009 -
Cmu08g0613 692 SUPERFAMILY Concanavalin A-like lectins/glucanases 23 258 IPR013320 -
Cmu08g0613 692 FunFam L-type lectin-domain containing receptor kinase VIII.1 447 658 - -
Cmu08g0613 692 Pfam Protein kinase domain 369 636 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu08g0613 692 Pfam Legume lectin domain 26 256 IPR001220 GO:0030246(InterPro)
Cmu08g0613 692 CDD STKc_IRAK 374 642 - -
Cmu08g0613 692 SMART serkin_6 368 639 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu08g0613 692 PANTHER - 36 650 IPR050528 GO:0002229(PANTHER)|GO:0005886(PANTHER)|GO:0042742(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g0384 Cmu-Chr2:3478530 Cmu08g0613 Cmu-Chr8:18320919 1.70E-18 dispersed
Cmu02g0617 Cmu-Chr2:6043283 Cmu08g0613 Cmu-Chr8:18320919 1.40E-11 dispersed
Cmu06g0741 Cmu-Chr6:8729075 Cmu08g0613 Cmu-Chr8:18320919 1.10E-08 dispersed
Cmu08g0613 Cmu-Chr8:18320919 Cmu10g1255 Cmu-Chr10:5451848 1.00E-127 dispersed
Cmu08g0613 Cmu-Chr8:18320919 Cmu10g2847 Cmu-Chr10:34927983 1.70E-95 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75714 PF00069 Pkinase 1.60E-42 CL0016 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu08g0613 - - - 0.0