Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu08g0638 ATGGCTGCAACTTCTGGTACTGTGCTTAATGGCTTGGGCTCACCCTTCCTCCGTGGAGGTAGCAGAACTCAGACCTTGTTGGCCGGAGCCAGAGGTGGTGTCAATGTTGTCGGCTCTCGTAAGCTTGTTGTCGTCGCGGCTGCTCAGCCCAAGAAGTCTTGGATCCCTGCTGTTAAGGGTGGCGGCAACTTGATCGACCCAGAATGGCTTGATGGCTCACTTCCAGGCGACTACGGCTTCGACCCACTAGGGTTGGGGAAGGACCCAGCCTTTCTGAAGTGGTACAGAGAGGCAGAGCTGATCCACGGGCGGTGGGCAATGGCAGCAGTGGTCGGAATCTTCGTAGGACAAGCGTGGAGTGGGATTCCATGGTTCGAAGCCGGAGCAGATCCAGGCGCAATCGCTCCATTCTCCTTCGGATCACTGCTAGGAACCCAGCTTCTGCTAATGGGATGGGTTGAAAGCAAGCGATGGGTGGATTTCTTCAACCCAGAATCTCAAGCGGTGGAATGGGCGACGCCATGGTCGAGAACAGCAGAGAACTTCGCAAATGCAACCGGAGAACAAGGGTATCCCGGAGGAAAATTCTTCGATCCATTGGGATTTGCAGGAACTATTAAAGATGGAGTTTACATTCCGGACACGGAGAAATTGGAGAGATTGAAGTTGGCGGAGATCAAGCATGCTAGAATCGCTATGTTAGCAATGCTCATCTTCTACTTTGAAGCTGGACAGGGGAAGACGCCATTGGGTGCTCTTGGATTGTAA 768 53.12 MAATSGTVLNGLGSPFLRGGSRTQTLLAGARGGVNVVGSRKLVVVAAAQPKKSWIPAVKGGGNLIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQAVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL 255
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 18580448 18581564 + CmPI595203_08g006380.1 Cmu08g0638 422124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu08g0638 255 FunFam Chlorophyll a-b binding protein, chloroplastic 67 254 - -
Cmu08g0638 255 Pfam Chlorophyll A-B binding protein 67 243 IPR022796 -
Cmu08g0638 255 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 51 253 IPR001344 GO:0009416(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0016020(InterPro)
Cmu08g0638 255 SUPERFAMILY Chlorophyll a-b binding protein 62 255 - -
Cmu08g0638 255 Gene3D Chlorophyll a/b binding protein domain 67 254 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu08g0638 Cmu-Chr8:18580448 Cmu08g1529 Cmu-Chr8:27128653 4.20E-31 dispersed
Cmu08g0638 Cmu-Chr8:18580448 Cmu04g0760 Cmu-Chr4:22113993 5.80E-25 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu08g0638 K08917 - csv:101204705 502.671