Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu08g0641 ATGGATCCCAACAAATTAAACCTAAGTACTTTGGAGCAACAATCCAATTTGGAGATCCAAACAAAGGAATTCGACTACTCGAAACGTGCACAATGGCTACGTGCTGCCGTGCTTGGTGCCAACGACGGGCTCGTCTCGACCGCGTCGCTTATGATGGGAGTTGGAGCTGTGAAACAAGACATCAAGGCCATGATCCTCACCGGTTTTGCCGGGCTAGTCGCGGGGGCGTGTAGTATGGCGATCGGGGAGTTTGTGTCTGTTTACTCTCAATTAGACATTGAAATGGCTCAAATAAAAAGAGAGAAATTACAAAGAAGTAGTAATATAGAAGGAGTAGTACAAGGGCAAGAGAGCAAAGATGAAGAAAAATTACCAAATCCACTTCAAGCAGCTGCAGCCTCTGCCTTAGCTTTCTCTCTAGGAGCAATGGTGCCATTATTGGCAGCTTCCTTTATAAGAGAATATAAAGTAAGGCTGGCGGTGGTTGTGGCAGCGGTGACGTTAGCTCTCGTCGTGTTCGGGTGGTTGGGCGCGGTCCTTGGAAAAGCATCACCGATCAAATCGGCCGCTAGAGTGTTGGTCGGAGGTTGGTTAGCTATGGCTATAACGTTTGGCTTGACAAAGCTAATCGGAGCAAGCGGACTCTAG 648 47.99 MDPNKLNLSTLEQQSNLEIQTKEFDYSKRAQWLRAAVLGANDGLVSTASLMMGVGAVKQDIKAMILTGFAGLVAGACSMAIGEFVSVYSQLDIEMAQIKREKLQRSSNIEGVVQGQESKDEEKLPNPLQAAAASALAFSLGAMVPLLAASFIREYKVRLAVVVAAVTLALVVFGWLGAVLGKASPIKSAARVLVGGWLAMAITFGLTKLIGASGL 215
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 18625649 18626296 + CmPI595203_08g006410.1 Cmu08g0641 422127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu08g0641 215 Pfam VIT family 33 110 IPR008217 GO:0005384(InterPro)|GO:0030026(InterPro)
Cmu08g0641 215 Pfam VIT family 120 207 IPR008217 GO:0005384(InterPro)|GO:0030026(InterPro)
Cmu08g0641 215 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 11 211 IPR008217 GO:0005381(PANTHER)|GO:0005384(InterPro)|GO:0005384(PANTHER)|GO:0006880(PANTHER)|GO:0016020(PANTHER)|GO:0030026(PANTHER)|GO:0030026(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu08g0641 Cmu-Chr8:18625649 Cmu09g0924 Cmu-Chr9:9194621 1.30E-73 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu08g0641 K22736 - csv:101204048 370.933