Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu08g0703 | ATGGAATTCCATCCGGAAAATGGCAACCATGGATCCGTGAAGGAGACCTCTTTGTGTGGCGACGTGGCGGTGTATTGGAGCAGTGCAGCGAAGGGGCTCGAGCAGAGTCATGTGGAGGAGTTTAAGCGTATGGTCATGGAATTTCGTCGCCCTATTGTGCGACTTGGAGGCGAGAGCCTCACGATAGCGCAAGTTGCTGCTATTGCTACCCGTGCCTTTGATGTTGCAGTGGAGCTCTCTGAGGAGGCTCGCCCTGCCGTGGAGGCAAGTAGTAGGTGGGTTGTTAAAAGTATGACTAATGGAACCGATAGTTATGGTGTTACAACTGGTTTTGGTTCTACGTCGCATCGGAGGACTGACCAAGGAGAAGCCCTTCAAAAAGAGCTCATTAGATTCTTAAATGCTGGAATTTTTGGAAACGATCCGAATTCTTGCCATACATTGCCACAACAAGCAACCAGAGCTGCCATGGTGGTGAGAATCAACACACTTTTGCAAGGCTATTCTGGCATTAGGTTTGAAATTTTGGAAGCCATAACCAAATTACTCAACCACAACATAACTCCATGTCTCCCTCTTAGAGGTACCATTACAGCTTCTGGTGACCTAGTTCCTCTCTCATATATTGCTGGGCTTTTGACTGGTCGACCTAATTCTAAGGCCATTGGGCCTAACGGTGACTCTCTTAACCCAATTGAGGCATTTCATCTTGCTGGGATTAGTGGTGGTTTCTTCAACTTGCAACCTAAAGAAGGTCTTGCTCTTGTCAATGGCACTGCAGTTGGGTCAGGCTTGGCTTCCATGGTTCTATTTGAAGCTAACTTTCTTGCTATCCTTTCTGCGATCTTGTCAGCAATTTTTGCTGAAGTTATGCAAGGAAAACCTGAGTTTACAGATCATTTGACTCATAAGTTAAAACACCATCCTGGTCAGATTGAAGCAGCTGCAATTATGGAGCATATATTAGATGGAAGTTCTTATGTCAAAAGTGCTAAAAAATTGCACGAAACTGACTCACTTCAAAAGCCTAAACAAGATCGATATGCTCTTAGAACTTCACCTCAGTGGCTCGGTCCTCAAATTGAAGTCATTAGATACTCCACCAAAATGATTGAACGTGAGATTAACTCAGTGAACGATAACCCATTGATTGATGTGTCGAGAAACAAGGCTTTGCATGGAGGAAATTTCCAAGGCACTCCCATTGGTGTGTCCATGGATAATACTCGTTTAGCCATTGCTTCTATTGGTAAACTCATGTTTGCACAATTCTCAGAACTTGTTAATGACTTCTACAATAATGGGTTGCCTTCAAATCTCTCTGCTAGTAGAAATCCAAGTTTGGATTACGGGTTTAAAGGTGCTGAGATTGCAATGGCTTCATATTGCTCTGAGCTTCAATACTTGGCAAATCCAGTAACCAGCCATGTCCAAAGCGCCGAACAACATAACCAAGACGTAAACTCATTGGGGTTGATATCATCAAGAAAGACAGCGGAAGCTGTTGAGATTTTAAAGCTTATGTCCACTACTTATTTGGTCGCATTATGCCAAGCTATTGATTTAAGACACATAGAGGAGATTTTGAAGAAAACAGTAAAGAATACCGTTAGCCAAGTGGCAAAAAAGATTCTGGTGTTGCACTTTAATGGCAATCTCCATCCAATTAGGCATAGTGAAAAGGATTTGCTTCAAGTCGTAGACAGAGAACACGTTTTTGCCTATATTGATGATCCTTGCAGTGCTTCATATCCATTGATGCAAAGGCTAAGACAAGTGTTGGTGGATCATGCCCTAAAAAATGGTGAAAAAGAAAACAACCCAAGTGCTTCAATCTTCCTAAAGATCACAGCTTTTGAAGATGAATTAAAAGCACTTTTGCCTAAAGAAGTGGAAAATGCAAGAATGGAAGTGGAAAAAGGGAGCCCTACCATTGAAAACCAAATTAAAGAATGCAGATCTTATCCACTGTACAAGTTCATTAGAGAAACGTTGGGAACTCAATTGTTGACTGGCGAGAAAGATGTTTCGCCAGGAGAAGAATTCGATAAGGTTTTTTCAGCTATTTCTGATGGAAAATTGATAGATCCAATGCTTGAATGTTTGAAGGATTGGAATGGTGCTCCGCTTCCTCTTAGTTAG | 2142 | 42.2 | MEFHPENGNHGSVKETSLCGDVAVYWSSAAKGLEQSHVEEFKRMVMEFRRPIVRLGGESLTIAQVAAIATRAFDVAVELSEEARPAVEASSRWVVKSMTNGTDSYGVTTGFGSTSHRRTDQGEALQKELIRFLNAGIFGNDPNSCHTLPQQATRAAMVVRINTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAIGPNGDSLNPIEAFHLAGISGGFFNLQPKEGLALVNGTAVGSGLASMVLFEANFLAILSAILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKSAKKLHETDSLQKPKQDRYALRTSPQWLGPQIEVIRYSTKMIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDFYNNGLPSNLSASRNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTAEAVEILKLMSTTYLVALCQAIDLRHIEEILKKTVKNTVSQVAKKILVLHFNGNLHPIRHSEKDLLQVVDREHVFAYIDDPCSASYPLMQRLRQVLVDHALKNGEKENNPSASIFLKITAFEDELKALLPKEVENARMEVEKGSPTIENQIKECRSYPLYKFIRETLGTQLLTGEKDVSPGEEFDKVFSAISDGKLIDPMLECLKDWNGAPLPLS | 713 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 19363888 | 19368134 | + | CmPI595203_08g007030.1 | Cmu08g0703 | 422189 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu08g0703 | 713 | PANTHER | HISTIDINE AMMONIA-LYASE | 20 | 712 | IPR001106 | GO:0016841(PANTHER)|GO:0045548(PANTHER) | |
Cmu08g0703 | 713 | FunFam | Phenylalanine ammonia-lyase | 13 | 259 | - | - | |
Cmu08g0703 | 713 | CDD | PAL-HAL | 58 | 523 | IPR001106 | - | |
Cmu08g0703 | 713 | FunFam | Phenylalanine ammonia-lyase | 260 | 542 | - | - | |
Cmu08g0703 | 713 | Gene3D | - | 526 | 647 | IPR023144 | - | |
Cmu08g0703 | 713 | SUPERFAMILY | L-aspartase-like | 24 | 712 | IPR008948 | GO:0003824(InterPro) | |
Cmu08g0703 | 713 | Pfam | Aromatic amino acid lyase | 60 | 536 | IPR001106 | - | |
Cmu08g0703 | 713 | Gene3D | Fumarase/aspartase (Central domain) | 260 | 708 | - | - | |
Cmu08g0703 | 713 | FunFam | Phenylalanine ammonia-lyase | 526 | 647 | - | - | |
Cmu08g0703 | 713 | ProSitePatterns | Phenylalanine and histidine ammonia-lyases signature. | 195 | 211 | IPR022313 | GO:0016841(InterPro) | |
Cmu08g0703 | 713 | Gene3D | - | 15 | 259 | IPR024083 | - | |
Cmu08g0703 | 713 | NCBIfam | phenylalanine ammonia-lyase | 25 | 703 | IPR005922 | GO:0005737(InterPro)|GO:0006559(InterPro)|GO:0016841(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu07g1165 | Cmu-Chr7:26949215 | Cmu08g0703 | Cmu-Chr8:19363888 | 0.00E+00 | dispersed | |
Cmu07g1166 | Cmu-Chr7:26953068 | Cmu08g0703 | Cmu-Chr8:19363888 | 0.00E+00 | dispersed | |
Cmu02g2120 | Cmu-Chr2:34875763 | Cmu08g0703 | Cmu-Chr8:19363888 | 0.00E+00 | wgd | |
Cmu04g0943 | Cmu-Chr4:23909135 | Cmu08g0703 | Cmu-Chr8:19363888 | 0.00E+00 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu08g0703 | K10775 | - | csv:101206890 | 1280.0 |