Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu08g0725 ATGGAGGTTTCCGGCAGCGGCGGCGGCGGAGGAAGTTCATCAAGCGAGAAACGGCGTCGTTCGCTCAGAGAAATCACGACCTCCTTCTTCATCGACGTACTAACCGGACCTTGGTTCATGGTGTTCGCTTCATTCCTCGTCATGTCCACCGCCGGAACGCCGTACATGTTCGGACTTTACTCCGGCGCCATAAAATCCGTCCTCGGCTACGATCAGAGCACTCTGAATCTAATCAGTTTTTTCAAAGACCTAGGAACGAACGTCGGCGTAATTTCCGGCCTAATCGCCGAAATTACGCCGCCGTGGGTGGTTCTAGCGATCGGCGCGGCGATGAACTTCGTCGGATACTTCATGATTTGGTTATCGGTGACGGAAAAAGTGGCGGCGCCGTCGGTGTGGCTGATGTGTCTTTACATTTGCTTAGGGGCAAATTCGACGGCGTTTGCGAACACCGGGGCTTTAGTGACTTGTGTGAAGAATTATCCGGCGAGAAGAGGAGCGGTTCAACATCAGCCTAATGAACTCACAGTTTTCTACAGGTTCTTGTACATTTCTCTTGGCCTAGCCGGATTTCTCATGGTGATGATCGTTCTTCAGCAGAAATTCAAATTCTCCCACATCGAATACAGTTCCAGCGCCGCCGTCGTCGTCTTCCTCCTCTTCTTTCCGATCTTCATCGTCATCGCCGAAGATTACAAATTCTGGCGCAAAAAGCTATCTCAACTCCAAAATCCTTCTCCACTCACCATCATCACTCAAAAACCGCCGCCGTCGCAACAGTTCCCAATCAACCTCGAAACCTCCAACACATCTCCCGCCGGACAACCAAAGCCACAAACGCTATCCTGCTGGAGAACCGCCCTAAATCCGCCGCCAAGAGGCGAAGATTACACGATTCTACAAGCGCTCTTTAGCGCCGACATGCTCCTCCTATTCCTCTCCACCGCGTGCGGCGTCGGCGGCACTCTCACCGCCATCGACAACCTCGGCCAAATCGGCGCTTCTCTACGGTATCCTAAACAGAGCATTAGCACATTTGTATCATTAGTCAGTATTTGGAATTACCTAGGGCGCGTAGTTTCGGGTTTCACCTCAGAAATTTTCCTCACCAAATACAAATTCCCACGAACCCTAATTCTAACCCTAATTCTCCTCCTCTCTTGCGTCGGCCACCTCCTAATCGCCTTCAATCCTCCCGGCGGCCTCTACTTCGCTTCAATCGTCATCGGATTCTGCTACGGTGCTCAATGGCCGATTCTATTCGCCATAATTTCCGAGATCTTCGGCCTCAAATACTACTCGACACTTTACAATTTCGGATCCGCCGCGAGTCCGATCGGGTTGTATTTCGTCAATGTTCGAGTCGCCGGACATTTGTACGACAAGGAGGCCGACCGGCAAATGGCGGCGGCAGGGAGGACGAGGATAGCCGGAGAAGAGTTGAACTGCGTTGGCGTTAATTGCTTTAAAATGTCGTTCATTATAATCACCGGAGTTACTTTGATTGGAGCTCTGTTTTCATTCATTTTGGTTCTTAGAACCAAAGGTTTTTATAAGACTGATATTTATAGGAGGTTTAGGGATGAGGTTGAAGAAGAAGCAGCTGCTGGAAACGACGTCGTTTCAAATGATGATAGAAATGTAGAAGGCAACAAGTAA 1659 49.97 MEVSGSGGGGGSSSSEKRRRSLREITTSFFIDVLTGPWFMVFASFLVMSTAGTPYMFGLYSGAIKSVLGYDQSTLNLISFFKDLGTNVGVISGLIAEITPPWVVLAIGAAMNFVGYFMIWLSVTEKVAAPSVWLMCLYICLGANSTAFANTGALVTCVKNYPARRGAVQHQPNELTVFYRFLYISLGLAGFLMVMIVLQQKFKFSHIEYSSSAAVVVFLLFFPIFIVIAEDYKFWRKKLSQLQNPSPLTIITQKPPPSQQFPINLETSNTSPAGQPKPQTLSCWRTALNPPPRGEDYTILQALFSADMLLLFLSTACGVGGTLTAIDNLGQIGASLRYPKQSISTFVSLVSIWNYLGRVVSGFTSEIFLTKYKFPRTLILTLILLLSCVGHLLIAFNPPGGLYFASIVIGFCYGAQWPILFAIISEIFGLKYYSTLYNFGSAASPIGLYFVNVRVAGHLYDKEADRQMAAAGRTRIAGEELNCVGVNCFKMSFIIITGVTLIGALFSFILVLRTKGFYKTDIYRRFRDEVEEEAAAGNDVVSNDDRNVEGNK 552
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 19602125 19605714 + CmPI595203_08g007250.1 Cmu08g0725 422211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu08g0725 552 CDD MFS_Mch1p_like 36 504 - -
Cmu08g0725 552 Pfam Nodulin-like 169 228 IPR010658 -
Cmu08g0725 552 Pfam Nodulin-like 37 168 IPR010658 -
Cmu08g0725 552 SUPERFAMILY MFS general substrate transporter 37 517 IPR036259 -
Cmu08g0725 552 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 174 527 - GO:0016020(PANTHER)
Cmu08g0725 552 Gene3D MFS general substrate transporter like domains 303 519 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu04g0307 Cmu-Chr4:8282818 Cmu08g0725 Cmu-Chr8:19602125 4.50E-121 dispersed
Cmu05g2185 Cmu-Chr5:31299360 Cmu08g0725 Cmu-Chr8:19602125 4.00E-132 dispersed
Cmu05g2186 Cmu-Chr5:31309409 Cmu08g0725 Cmu-Chr8:19602125 9.00E-186 dispersed
Cmu08g0725 Cmu-Chr8:19602125 Cmu10g2723 Cmu-Chr10:33910987 9.70E-134 dispersed
Cmu10g2720 Cmu-Chr10:33885032 Cmu08g0725 Cmu-Chr8:19602125 9.40E-143 wgd
Cmu05g2184 Cmu-Chr5:31288056 Cmu08g0725 Cmu-Chr8:19602125 5.20E-186 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu08g0725 - - - 0.0