Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu08g0927 ATGAGCCTACGCAAGGGCTCTAAGGTTTGGGTGGAAGATAAAGATTTTGCTTGGGTGGCAGCTGAAGTCCTCGACTTCGTTGGCAAACAAGTTCGAGTTTCAACTGTTACTGGAAAGAAGGTGTTGGCTCTTCCTGAGAAGCTTTTGCCGAGGGACGCGGATGAGGATGACCACGGAGGAGTGGATGACATGACGAAGTTGACCTATTTGAATGAGCCTGGCGTGCTTTATAATCTTCAAAGAAGATATTCTCTCAATGACATATATACATATACTGGTAGCATTTTGATTGCTGTTAATCCATTCACAAAGCTTCCCCATCTATACAATGTTCACATGATGGAGCAGTACAAGGGAGCACCTTTTGGGGAACTGAGCCCTCATGTTTTTGCTGTTGCTGATGCATCGTACAGAGCAATGATTAGTGAGGGTCGAAGCCAGTCTATATTGGTCAGTGGAGAGAGTGGGGCAGGGAAAACTGAGACAACAAAATTGATTATGCAGTATCTTACATTTGTTGGAGGGCGAGCGGCAGGGGATAACAGAACTGTTGAGCAACAAGTTCTTGAATCAAATCCTTTACTGGAAGCATTTGGAAATGCAAGGACCGTTAGAAATGATAATTCAAGTCGTTTTGGAAAGTTTGTTGAAATTCAATTTGATACCAGTGGTAGAATATCGGGTGCTGCAATTAGAACTTATCTTCTGGAACGGTCTCGTGTTGTACAAATCACGAACCCGGAGAGGAACTATCATTGTTTTTATCAGCTATGTGCATCCGGAAGGGATGCTGAGAAGTACAACTTAGACCACCCGAGTCATTTCCGATACTTAAATCAAAGCAAGACCTATGAGTTAGATGGAGTGAGCAATGCTGAAGAGTATATTAGGACAAGGAGGGCAATGGACATAGTTGGTATCAGTCATGAGGATCAGGAAGCTATCTTTCGTACCTTGGCCGCGATTTTGCATCTGGGGAACGTTGAGTTTTCTCCTGGAAAAGAACACGATTCTTCAGTCTTGAAGGACGAAAAGTCTACCTTTCATTTAGGGGTGGCTTCTAATCTTCTCATGTGTGATTCCAACCTCTTGGTCTCAGCCCTTTGTACTCGTTCAATTCAAACTCGTGAAGGAATTATTGTCAAAGCGCTAGACTGCGAAGGTGCTGTTGCTAGTCGGGATGCACTGGCAAAGACTGTTTATGCTCGTCTGTTTGATTGGCTTGTTGATAAGATTAACCTGTCCGTCGGGCAAGATTTAAATTCTCAATTTCAAATTGGGTTACTGGACATTTACGGTTTTGAATGCTTTAAGGACAATAGTTTTGAGCAGTTTTGCATCAACTTTGCAAATGAAAAGCTTCAGCAACATTTTAATGAGCATGTCTTTAAGATGGAACAGGAGGAGTATAGCAAAGAGGAAATAAATTGGAGCTACATTGAATTCATTGACAATCAGGATGTGTTGGATTTGATTGAGAAGAAACCTATTGGGATCATTGGTTTGCTGGATGAGGCTTGTATGTTCCCAAGATCAACTCATGAAACATTCTCAACCAAATTGTTTCAGAATTTTCGTACTCATCCCAGGCTGGAAAGAACAAAATTTTCAGAAACAGATTTCACCCTTTCTCATTATGCTGGAAAGGTCACTTATCATACAGATACCTTTTTAGACAAAAATCGCGATTATGTTGTAGTAGAGCATTGCAATCTATTGGCTTCTTCTAAATGCAATTTTGTTGCTGGCCTTTTCTCTTCCTTACCAGAGGAATCTTCAAGATCATCATATAAATTTTCTTCCGTAGCCTCAAGATTTAAGCAACAACTTCAAGCACTCATGGAGACATTGAATTCTACCGAGCCCCATTATGTACGCTGTGTGAAGCCAAACTCTCTTAATAGGCCCCAGAAGTTTGAGAACCTAAGCATTCTGCATCAATTACGTTGTGGGGGTGTTTTGGAGGCTGTTCGAATAAGTCTAGCAGGTTATCCCACCAGACGAACTTATGCAGAGTTCATTGACCGTTTTGGTTTGTTGGCACCTGATTTATTGGATGGAAGCTACGATGAAAGATTGATTACAGAAAAGATTCTACAAAAGTTGAAGCTAAAAAATTTTCAGTTGGGTAGGACCAAAGTGTTTCTTAGGGCTGGTCAAATTGGAATACTGGATGCTCGAAGAGCTGAAGTATTAGACAATGCTGCAAAGTGCATTCAACGCCGATTACGAACATATCATGCGCGCAGGGATTTTCTATTGATGCGTTCTACTGCAATTGCACTCCAAGCATATTGCAGAGGATGCCTTGCCCGAAATTTTTATGTAGCAAAACGAGAAAGCACTGCTGCCACTACGATACAGAAATATATTCGCAGGTGGTTCTTCAGGAATATTTATTTGGAGATCTATTCAGCTGCTCTAACCATACAGTCCAGTATTCGTGGTTTTGCAACTCGCAGTAGGTTTTTGCATGATAGAAGAAATAAAGCTGCGGTATTAATTCAGGCTCGATGGAGGACATTCAAAGTTCGTGCTGTTTTCCATCGCCACCAAGCTTCTATTATTGCAATACAATGTCGATGGAGGCAAAAGCTTGCAAAAAGGGAACTTCGTAGACTTAAACAGGAGGCTAATGAAGCTGGAGCATTGCGTTTAGCTAAAAACAAACTTGAGAAGCAGTTGGAAGATCTTACATGGCGGTTGCATTTGGAGAAAAGATTGCGGGCTTCCAATGAAGAGGCCAAGTCAAACGAAATATTAAAATTGCAAAAGATGCTGGAATCCTTGAGTCTGGAGCTAGATGCAGCGAAATTGGCTGCAATCAATGAGTGCAACAAAAATGCTGTGCTGCAAAACCAAATGGAATTGTTGGCCAAGGAGAAGTCTGCTTTTGAAAGAGAAATTGTAGCGGTAGTTGAATTAAAAAAAGAAAATGCTTTCCTCAAGAGTGCTTTGGAGGCCATGGAAAAACGGAACTCAGCTCTGGAAGTTAAGCTTGTTGAGGCACAAAAGGATGGTAACCACACTGTTGAAAAGTTGCAGGATGTTGAACAGAAATGCACTAAGCTTCAACAGAATGTGAAAAGTCTTGAAGAGAAACTCTCAGTTCTAGAGGACGAGAATCATGTATTGCGACAGAAAGCCTTAAGTGCAACTCCAAGGAGCAACCGACCCAATTTTGTAAGGGCATTATCGGAGAAATCCTCAGTTGCGCTTGTCCCTAATGCTGAGCGGAAAACTCTATTTGAGTCACCAACACCCACAAAACTGGTTGCACCTTTTTCACAAGGTCTTTCTGAATCACGGCGAACAAAATTAACTGTAGAGAGACACCAGGAAAACTATGAAGTCCTTTCTAGGTGTATTAAAGAAAATTTGGGGTTTAAAGGTAGCAAGCCACTGGCCGCTTGCATCATCTACAAATGCCTTCTTAACTGGCATGCCTTTGAATCGGAACGAACAGTTATTTTTGACTATATAATTGAAGGAATCAATGATGCCCTCAAGGCTGGGGACGAGAATATTACCTTGCCATATTGGTTGTCAAATGCGTCTGCACTACTATGCCTCTTGCAAAGAAATTTGAAGTCAAATGGTTTTTTGAGCGCAGCTTCTCAGCGTTCCACAGGTTCCACTGGCTTAGCTAGCAGGATTTCTCAGGGACTAAAATCACCCTTCAAATATATTGGGTTTGAAGATGGGATTTCTCATCTTGAAGCAAGATATCCGGCAATATTGTTTAAACAGCAATTAACTGCTTGTGTGGAGAAGATCTTTGGCTTGATCCGTGATAATTTGAAAAAAGAATTATCTCCATTGCTGAGCTCATGTATTCAGGCACCAAAAGCTGCACGAGTACATGCTGGGAAGTCCTCTAGATCGCCTGGTGTTCCCCAGCCATCTACAAGTAGTCCATGGGATAACATAATAAAGTTTTTAGATTCTTTGATGAGTCGATTACGTGCGAATCATGTACCGTCTTTCTTCATTCGTAAATTGATTACTCAGGTGTTCTCGTTCATCAATATTTCACTTTTTAATAGCCTTCTTCTGCGACGTGAATGTTGTACGTTTTCAAATGGGGAGTACGTGAAATCTGGTCTTGCAGAACTAGAGAAGTGGATTGGCAATGCAACAGAGGAGTATTCAGGGACCTCTTGGCACGAGCTAAACTATATAAGGCAAGCTGTCGGGTTTCTGGTAATACATCAGAAGCGAAAGAAATCACTAGAAGAGATAAGACAGGATCTTTGCCCCGCATTGACCGTGAGACAAATTTATCGCATTAGTACTATGTATTGGGATGATAAATACGGGACTCAGAGTGTGTCAAACGAGGTGGTTGCTCAAATGAGGGAAATTCTGAACAAGGACAATCAGAACTTAACCTCAAATTCATTTTTATTGGATGATGATCTGAGCATCCCATTCTCTACTGAAGACATTGATATGGCTCTTCCCCCCCTTGAACCGTCGGACATTGAACTTCCCACTTTCCTGTCGGAATACCCCTGTGCACAATTTCTGGTCGAGCAGCAAAAGTAG 4548 41.62 MSLRKGSKVWVEDKDFAWVAAEVLDFVGKQVRVSTVTGKKVLALPEKLLPRDADEDDHGGVDDMTKLTYLNEPGVLYNLQRRYSLNDIYTYTGSILIAVNPFTKLPHLYNVHMMEQYKGAPFGELSPHVFAVADASYRAMISEGRSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAGDNRTVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDTSGRISGAAIRTYLLERSRVVQITNPERNYHCFYQLCASGRDAEKYNLDHPSHFRYLNQSKTYELDGVSNAEEYIRTRRAMDIVGISHEDQEAIFRTLAAILHLGNVEFSPGKEHDSSVLKDEKSTFHLGVASNLLMCDSNLLVSALCTRSIQTREGIIVKALDCEGAVASRDALAKTVYARLFDWLVDKINLSVGQDLNSQFQIGLLDIYGFECFKDNSFEQFCINFANEKLQQHFNEHVFKMEQEEYSKEEINWSYIEFIDNQDVLDLIEKKPIGIIGLLDEACMFPRSTHETFSTKLFQNFRTHPRLERTKFSETDFTLSHYAGKVTYHTDTFLDKNRDYVVVEHCNLLASSKCNFVAGLFSSLPEESSRSSYKFSSVASRFKQQLQALMETLNSTEPHYVRCVKPNSLNRPQKFENLSILHQLRCGGVLEAVRISLAGYPTRRTYAEFIDRFGLLAPDLLDGSYDERLITEKILQKLKLKNFQLGRTKVFLRAGQIGILDARRAEVLDNAAKCIQRRLRTYHARRDFLLMRSTAIALQAYCRGCLARNFYVAKRESTAATTIQKYIRRWFFRNIYLEIYSAALTIQSSIRGFATRSRFLHDRRNKAAVLIQARWRTFKVRAVFHRHQASIIAIQCRWRQKLAKRELRRLKQEANEAGALRLAKNKLEKQLEDLTWRLHLEKRLRASNEEAKSNEILKLQKMLESLSLELDAAKLAAINECNKNAVLQNQMELLAKEKSAFEREIVAVVELKKENAFLKSALEAMEKRNSALEVKLVEAQKDGNHTVEKLQDVEQKCTKLQQNVKSLEEKLSVLEDENHVLRQKALSATPRSNRPNFVRALSEKSSVALVPNAERKTLFESPTPTKLVAPFSQGLSESRRTKLTVERHQENYEVLSRCIKENLGFKGSKPLAACIIYKCLLNWHAFESERTVIFDYIIEGINDALKAGDENITLPYWLSNASALLCLLQRNLKSNGFLSAASQRSTGSTGLASRISQGLKSPFKYIGFEDGISHLEARYPAILFKQQLTACVEKIFGLIRDNLKKELSPLLSSCIQAPKAARVHAGKSSRSPGVPQPSTSSPWDNIIKFLDSLMSRLRANHVPSFFIRKLITQVFSFINISLFNSLLLRRECCTFSNGEYVKSGLAELEKWIGNATEEYSGTSWHELNYIRQAVGFLVIHQKRKKSLEEIRQDLCPALTVRQIYRISTMYWDDKYGTQSVSNEVVAQMREILNKDNQNLTSNSFLLDDDLSIPFSTEDIDMALPPLEPSDIELPTFLSEYPCAQFLVEQQK 1515
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 21561758 21604394 - CmPI595203_08g009270.1 Cmu08g0927 422413
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cmu08g0927 1515 Pfam DIL domain 1334 1437 IPR002710 -
Cmu08g0927 1515 CDD MyosinXI_CBD 1110 1481 IPR037975 GO:0007015(InterPro)
Cmu08g0927 1515 PANTHER MYOSIN 826 1456 - GO:0000146(PANTHER)|GO:0005737(PANTHER)|GO:0007015(PANTHER)|GO:0015629(PANTHER)|GO:0030050(PANTHER)|GO:0031982(PANTHER)|GO:0051015(PANTHER)
Cmu08g0927 1515 Coils Coil 972 1006 - -
Cmu08g0927 1515 ProSiteProfiles IQ motif profile. 755 784 - -
Cmu08g0927 1515 ProSiteProfiles IQ motif profile. 828 857 - -
Cmu08g0927 1515 Gene3D - 435 620 - -
Cmu08g0927 1515 Gene3D - 829 879 - -
Cmu08g0927 1515 Gene3D - 731 781 - -
Cmu08g0927 1515 Gene3D - 782 828 - -
Cmu08g0927 1515 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 778 878 IPR027417 -
Cmu08g0927 1515 Coils Coil 864 908 - -
Cmu08g0927 1515 Pfam Myosin head (motor domain) 61 717 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cmu08g0927 1515 Gene3D - 663 730 - -
Cmu08g0927 1515 PRINTS Myosin heavy chain signature 146 171 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cmu08g0927 1515 PRINTS Myosin heavy chain signature 193 220 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cmu08g0927 1515 PRINTS Myosin heavy chain signature 425 453 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cmu08g0927 1515 PRINTS Myosin heavy chain signature 478 506 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cmu08g0927 1515 PRINTS Myosin heavy chain signature 89 108 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cmu08g0927 1515 Coils Coil 920 940 - -
Cmu08g0927 1515 Coils Coil 1014 1048 - -
Cmu08g0927 1515 ProSiteProfiles Myosin motor domain profile. 59 729 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cmu08g0927 1515 Gene3D - 249 306 - -
Cmu08g0927 1515 CDD MYSc_Myo11 73 717 IPR036018 -
Cmu08g0927 1515 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 4 53 IPR004009 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cmu08g0927 1515 SMART iq_5 731 753 IPR000048 GO:0005515(InterPro)
Cmu08g0927 1515 SMART iq_5 827 849 IPR000048 GO:0005515(InterPro)
Cmu08g0927 1515 SMART iq_5 779 801 IPR000048 GO:0005515(InterPro)
Cmu08g0927 1515 SMART iq_5 850 872 IPR000048 GO:0005515(InterPro)
Cmu08g0927 1515 SMART iq_5 754 776 IPR000048 GO:0005515(InterPro)
Cmu08g0927 1515 SMART iq_5 802 824 IPR000048 GO:0005515(InterPro)
Cmu08g0927 1515 SMART DIL_2 1333 1440 IPR002710 -
Cmu08g0927 1515 Gene3D Myosin VI head, motor domain, U50 subdomain 308 598 - -
Cmu08g0927 1515 Pfam IQ calmodulin-binding motif 783 800 IPR000048 GO:0005515(InterPro)
Cmu08g0927 1515 Pfam IQ calmodulin-binding motif 759 772 IPR000048 GO:0005515(InterPro)
Cmu08g0927 1515 Pfam IQ calmodulin-binding motif 805 823 IPR000048 GO:0005515(InterPro)
Cmu08g0927 1515 Pfam IQ calmodulin-binding motif 830 848 IPR000048 GO:0005515(InterPro)
Cmu08g0927 1515 Pfam IQ calmodulin-binding motif 734 752 IPR000048 GO:0005515(InterPro)
Cmu08g0927 1515 Gene3D Kinesin motor domain 62 659 IPR036961 -
Cmu08g0927 1515 FunFam Myosin heavy chain 249 303 - -
Cmu08g0927 1515 SMART MYSc_2a 53 730 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cmu08g0927 1515 Coils Coil 948 968 - -
Cmu08g0927 1515 ProSiteProfiles IQ motif profile. 805 832 - -
Cmu08g0927 1515 ProSiteProfiles Dilute domain profile. 1159 1458 IPR002710 -
Cmu08g0927 1515 ProSiteProfiles IQ motif profile. 851 880 - -
Cmu08g0927 1515 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 50 777 IPR027417 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu08g0927 Cmu-Chr8:21561758 Cmu09g0342 Cmu-Chr9:3279348 0.00E+00 dispersed
Cmu08g0927 Cmu-Chr8:21561758 Cmu06g0131 Cmu-Chr6:1279213 0.00E+00 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu08g0927 K10357 - csv:101210527 2890.91