Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu08g0935 | ATGGACGGCGGTGCTCCGTACAATCCACGTACCGTGGAAGAGGTGTTTAGGGATTTCAAGGGCCGTAGAGCTGGTTTAATTAAGGCTCTAACTACTGATGTTGAAGAGTTCTACCAGCAATGTGATCCTGAGAAAGAAAATCTTTGCCTTTATGGATTTCCTAGCGAGCAGTGGGAAGTCAATCTACCTGCGGAAGAGGTGCCTCCGGAGCTTCCAGAACCTGCGCTGGGCATAAATTTTGCTAGAGATGGGATGCAAGAAAAGGACTGGCTATCTTTGGTTGCAGTGCATAGTGATGTTTGGCTGCTCTCTGTGGCATTTTATTTTGGAGCTAGGTTTGGATTTGATAAGACAGATAGGAAGCGTCTATTTAATATGATAAATGATCTTCCAACAATATTTGAAGTGGTGACAGGGACAGCCAAAAAACAAGTTAAGGATAAATCATCAGTTTCAAATCATAGCAGTAATAAATCTAAATCAAATCCAAAGCGGAGTTCCGAACCTCAAATAAAAAATACAAAAGCTGTTCAATCGAAGGACGAGGACGAGGAAGGCTTGGAAGAGGAAGATGAGGAAGAACATGGAGAAACACTTTGTGGAGCTTGTGGAGAGAATTATGCATCTGATGAGTTTTGGATTTGCTGTGACATATGCGAGAAATGGTTCCATGGGAACACGTGTGGATACCTTTCTCTATTGTTCGGGATGTTCGGGTCATGGGTGCAACAAGGAGAGATTTGGTTCGTTTGTGCGGTTTCGTTATGCGTTGAAGTCAAGTGGATAAGAGTGCTTTCAAAGGCAAGAAGAGCGGCGCGCATCTCATATCGGCCGAGGTTGTCTTCGGCCATGGTGGCTATGGCTGTCCATGGTGGTGGTTTTTGGCAGTGGGCGGTGCTTGTCGGCGGCAGACATGGTGAAAGTGAAGGTGGAGAAATTTAG | 942 | 45.12 | MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDRKRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKNTKAVQSKDEDEEGLEEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGNTCGYLSLLFGMFGSWVQQGEIWFVCAVSLCVEVKWIRVLSKARRAARISYRPRLSSAMVAMAVHGGGFWQWAVLVGGRHGESEGGEI | 313 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 21711968 | 21718700 | + | CmPI595203_08g009350.1 | Cmu08g0935 | 422421 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu08g0935 | 313 | PANTHER | CPG BINDING PROTEIN | 8 | 227 | IPR045104 | GO:0000976(PANTHER)|GO:0003712(PANTHER)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0042393(InterPro) | |
Cmu08g0935 | 313 | Pfam | Alfin | 11 | 138 | IPR021998 | GO:0006355(InterPro)|GO:0042393(InterPro) | |
Cmu08g0935 | 313 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 190 | 231 | IPR013083 | - | |
Cmu08g0935 | 313 | MobiDBLite | consensus disorder prediction | 145 | 193 | - | - | |
Cmu08g0935 | 313 | MobiDBLite | consensus disorder prediction | 145 | 174 | - | - | |
Cmu08g0935 | 313 | SUPERFAMILY | FYVE/PHD zinc finger | 171 | 226 | IPR011011 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu08g0935 | Cmu-Chr8:21711968 | Cmu09g0082 | Cmu-Chr9:1019680 | 2.00E-96 | dispersed | |
Cmu08g0935 | Cmu-Chr8:21711968 | Cmu11g0156 | Cmu-Chr11:2049808 | 1.80E-108 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu08g0935 | K26274 | - | csv:101208889 | 404.445 |