Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu08g0944 ATGTCTCCCTCCTCCTATCCACCCGAAGATGGGATTCCTTTGAACACCACGGCGGTGGCCATTGACAAGGATAAGAACAGCCATCACGCCGTCCGCTGGGCTATTGATCATCTGGTCATTAGCAATCCACTTATCATTCTCATCTACGTTAGGCATAAAGCTAATCAACATCAGGGAGCGAGCGATTCTGAAAATGGTGAAACTGATGCCCAGCAGCTGTTTATTCCTTATCGTGGATATTGTGCTCGTAAAGGGGTTCAGCTGAAGGAGGTTGTTCTTGACGATACTGATATTCCCAAAGCGCTTGTTGACTACGTTCACAAGAATTGCATCAACAATTTTGTAGTTGGAGCTTCAACAAGGAGTGCTTTAGCAAGGAAATTTAAAGGTCCTGATGTTCCAACCAGCATAATAAAAACTGCCCCAGAATTTTGTTCTGTTTATGTAATATCAAAAGGGAAGATAATATCTGCCAGGGCAGCTCTTCGGCCAGTGGCTAATACTGCCACGCCACCAAGACAACCGTCGCCGCTTGGAGTTCAGCCAAATGTTCAACCAGATAGCAGCAACGAACTGGACAATGGAGCCAAAGGGCAACCAGCAAAGGAAGGATGGAAAAGTGCAGGTACAGAGAGAATGCTCGCTGAAAGGAATAGTGGTGCAAAACCAGCAAAAGCGTTGACCCGTGAGAGGCCAAAAACTTCTCCAACTAATATATCAATGGAAAATATAGAGGTTCCAAATCGAGGGTCTAGGTCTTCATTTAGTCGTGATTCGATATCTGATGACAATATGCTGACTGCACAGATGGCCTTTGGTTCAATGGACGTGACTGCTCAAAATTTAGATTTCAGTGGCTCAAATTTGTCAGTGGACTCTGCTTCCACACAATCTACTCGGGAACTAGAGGCTGAGATGAAAAGATTGAAGCTGGAATTAAAGCAAACCATGGATATGTATAGCTCAGCCTGTAAAGAGGCAATCTCAGCCAAGAACAAGGCGAGAGAACTTAGTCAGTGGAAGCAAGATGAGGCACGTAAGTTCGAGGAAGTCAGGCTAGCTGAAGAGGCTGCTCTCGCTATTGCTGAGATGGAGAAAGCCAAGTGCAAAGCTGCCATTGAAGCAGCAGAGGCAGCACAAAAGCTAGCCGAAAGAGAAGCCCAGAGAAGAAAACAGGCTGAAATGAAAGCCAGACGAGAGGCAGAAGAGAAAAAACGAGCATTGAATGCTCTAGCTCAGAATGACGTCCGATATAGAAAATACACTATAGAGGAGATTGAGGAATCTACTGAAAAGTTCTCTGAAAAATTGAAGATTGGAGAAGGTGGATACGGTCCTGTTTATGGTGGCAAACTTGATCATACAGCTGTTGCGATTAAAGTTTTAAGACCTGACGCTGCTCAAGGACGGAAGCAATTCCAACAAGAGGTGGAGGTCCTCTGTTGTATTAGACATCCAAACATGGTCCTTCTTCTTGGGGCATGCCCCGAGTATGGTTGCTTGGTATATGAGTACATGCATAATGGGAGCTTAGAAGACAGACTTTTCCGGAGAGGGAATACTCCTCCATTATCTTGGAGACGACGATTCAAAATAGCTGCTGAAATTGCAACCGCTCTCCTTTTTCTTCACCAAGCAAAGCCAGAGCCGCTCGTTCATAGGGACCTTAAACCAGCTAACATTCTCCTGGACCGCAATTATGTGAGCAAAATCAGTGATGTTGGCCTGGCCCGATTAGTCCCACCTTCTGTAGCTGATCAAGTCACACAATATCACCTGACTTCAGCAGCTGGCACATTTTGTTACATTGATCCCGAGTACCAACAAACAGGGCAGTTAACGACAAAATCAGATATTTACTCGTTTGGAATAATGTTACTTCAAATTATTACTGCCAAACCTCCAATGGGTTTGGCTCACCATGTGCAAAGGGCTATTGAGAAAGAGAGGTTTGATGAGATGCTGGATCCTACAATTTCAGATTGTCCACTGGAGGAGGCCATAAATTTTGCAAACTTGGCATTGAAGTGCGCTGAACTGAGGAAGAGAGACAGGCCAGATCTTGGAACAGTTATAGTTCCAGAGCTCAACAGGTTAAGAGATATTGGGAGGAGTTCTGACAAACGTGAAAGCCGAAGTAACTTCCCACGCTCTGCTGCATCAAGTTCCAGTTCAAGGGCGCAGTCATCAAATGAGGATTCCAGAGTTAGTTATGCTGATGAAGGAAGTTAG 2232 44.98 MSPSSYPPEDGIPLNTTAVAIDKDKNSHHAVRWAIDHLVISNPLIILIYVRHKANQHQGASDSENGETDAQQLFIPYRGYCARKGVQLKEVVLDDTDIPKALVDYVHKNCINNFVVGASTRSALARKFKGPDVPTSIIKTAPEFCSVYVISKGKIISARAALRPVANTATPPRQPSPLGVQPNVQPDSSNELDNGAKGQPAKEGWKSAGTERMLAERNSGAKPAKALTRERPKTSPTNISMENIEVPNRGSRSSFSRDSISDDNMLTAQMAFGSMDVTAQNLDFSGSNLSVDSASTQSTRELEAEMKRLKLELKQTMDMYSSACKEAISAKNKARELSQWKQDEARKFEEVRLAEEAALAIAEMEKAKCKAAIEAAEAAQKLAEREAQRRKQAEMKARREAEEKKRALNALAQNDVRYRKYTIEEIEESTEKFSEKLKIGEGGYGPVYGGKLDHTAVAIKVLRPDAAQGRKQFQQEVEVLCCIRHPNMVLLLGACPEYGCLVYEYMHNGSLEDRLFRRGNTPPLSWRRRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADQVTQYHLTSAAGTFCYIDPEYQQTGQLTTKSDIYSFGIMLLQIITAKPPMGLAHHVQRAIEKERFDEMLDPTISDCPLEEAINFANLALKCAELRKRDRPDLGTVIVPELNRLRDIGRSSDKRESRSNFPRSAASSSSSRAQSSNEDSRVSYADEGS 743
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 21775898 21779529 + CmPI595203_08g009440.1 Cmu08g0944 422430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu08g0944 743 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 17 149 - -
Cmu08g0944 743 CDD STKc_IRAK 439 699 - -
Cmu08g0944 743 Gene3D Phosphorylase Kinase; domain 1 401 505 - -
Cmu08g0944 743 MobiDBLite consensus disorder prediction 702 743 - -
Cmu08g0944 743 Pfam Protein tyrosine and serine/threonine kinase 437 691 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu08g0944 743 ProSiteProfiles Protein kinase domain profile. 433 696 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu08g0944 743 Pfam Universal stress protein family 19 148 IPR006016 -
Cmu08g0944 743 PANTHER OS02G0152300 PROTEIN 18 727 IPR051348 -
Cmu08g0944 743 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 405 505 - -
Cmu08g0944 743 FunFam U-box domain-containing protein 51 506 706 - -
Cmu08g0944 743 SMART serkin_6 433 696 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu08g0944 743 MobiDBLite consensus disorder prediction 167 257 - -
Cmu08g0944 743 MobiDBLite consensus disorder prediction 715 737 - -
Cmu08g0944 743 SUPERFAMILY Protein kinase-like (PK-like) 416 691 IPR011009 -
Cmu08g0944 743 Coils Coil 359 414 - -
Cmu08g0944 743 MobiDBLite consensus disorder prediction 180 195 - -
Cmu08g0944 743 ProSitePatterns Serine/Threonine protein kinases active-site signature. 551 563 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu08g0944 743 Gene3D HUPs 14 152 IPR014729 -
Cmu08g0944 743 CDD STK_N 16 153 - -
Cmu08g0944 743 Gene3D Transferase(Phosphotransferase) domain 1 506 721 - -
Cmu08g0944 743 MobiDBLite consensus disorder prediction 231 257 - -
Cmu08g0944 743 Coils Coil 299 319 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu08g0944 Cmu-Chr8:21775898 Cmu09g0078 Cmu-Chr9:944752 2.00E-182 dispersed
Cmu05g2688 Cmu-Chr5:35385732 Cmu08g0944 Cmu-Chr8:21775898 3.20E-207 transposed
Cmu08g1193 Cmu-Chr8:24359784 Cmu08g0944 Cmu-Chr8:21775898 1.60E-198 transposed
Cmu11g1150 Cmu-Chr11:21749267 Cmu08g0944 Cmu-Chr8:21775898 9.00E-184 transposed
Cmu11g1898 Cmu-Chr11:30986988 Cmu08g0944 Cmu-Chr8:21775898 1.10E-47 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75728 PF07714 PK_Tyr_Ser-Thr 1.90E-41 CL0016 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu08g0944 - - - 0.0