Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu08g0982 ATGTCTTCCGCCGAGAAGGAAAGAGAGACCCAGGTGTACATGGCCAAGCTCGCCGAGCAGGCCGAACGCTATGACGAAATGGTTGAGTGTATGAAGAATATTGCAAAACTTGACCTCGAACTAACTGTAGAGGAGAGAAACCTTCTTTCTGTGGGATACAAAAATGTCATAGGTGCCCGACGAGCTTCTTGGCGCATCATGTCTTCAATTGAGCAGAAAGAGGAGTCTAAGGGGAATGAGAACATTGTAAAATTGATAAAGAGTTACCGCCAGAAAGTGGAGGAGGAGCTTTCAAAGATTTGTGGTGACATTCTCTCTATCATAGACAAGCATCTAATCCCTCATTCATCCTCTGCAGAAGCCACCGTTTTCTACTACAAGATGAAAGGTGACTACTATCGTTATCTTGCTGAGTTCAAGACAGATCAAGATAGAAAAGAGGCTGCTGATCAATCGTTGAAGGGATATGAGGCTGCCTCAGGCACTGCGAATACCGAACTCCCATCAACCCACCCAATCCGTCTTGGCCTTGCACTCAATTTTTCTGTCTTCTACTATGAGATTATGAATTCTCCTGAGAGAGCTTGCCATTTGGCTAAACAAGCTTTTGATGAGGCAATTGCAGAGTTGGATACCTTGAGTGAGGAATCATACAAGGACAGCACTCTGATCATGCAGCTGTTGAGAGACAACCTCACCCTCTGGACCTCAGATTTGCCTGAAGATGGCGGTGACGAAAACTTCAAAGCTGAGGAATCCAAACCTGCGGAACCTGAGGCTCAGCAAGCCAAATGA 795 45.79 MSSAEKERETQVYMAKLAEQAERYDEMVECMKNIAKLDLELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNENIVKLIKSYRQKVEEELSKICGDILSIIDKHLIPHSSSAEATVFYYKMKGDYYRYLAEFKTDQDRKEAADQSLKGYEAASGTANTELPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGDENFKAEESKPAEPEAQQAK 264
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 22088518 22091271 - CmPI595203_08g009820.1 Cmu08g0982 422468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu08g0982 264 PIRSF 14-3-3 2 248 IPR000308 -
Cmu08g0982 264 Pfam 14-3-3 protein 14 236 IPR023410 -
Cmu08g0982 264 SUPERFAMILY 14-3-3 protein 7 238 IPR036815 -
Cmu08g0982 264 Coils Coil 14 34 - -
Cmu08g0982 264 SMART 1433_4 8 249 IPR023410 -
Cmu08g0982 264 ProSitePatterns 14-3-3 proteins signature 2. 218 237 IPR023409 -
Cmu08g0982 264 ProSitePatterns 14-3-3 proteins signature 1. 46 56 IPR023409 -
Cmu08g0982 264 PANTHER 14-3-3 PROTEIN 7 241 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Cmu08g0982 264 MobiDBLite consensus disorder prediction 238 264 - -
Cmu08g0982 264 PRINTS 14-3-3 protein zeta signature 155 181 IPR000308 -
Cmu08g0982 264 PRINTS 14-3-3 protein zeta signature 209 238 IPR000308 -
Cmu08g0982 264 PRINTS 14-3-3 protein zeta signature 40 69 IPR000308 -
Cmu08g0982 264 PRINTS 14-3-3 protein zeta signature 182 208 IPR000308 -
Cmu08g0982 264 PRINTS 14-3-3 protein zeta signature 89 113 IPR000308 -
Cmu08g0982 264 PRINTS 14-3-3 protein zeta signature 120 142 IPR000308 -
Cmu08g0982 264 MobiDBLite consensus disorder prediction 242 258 - -
Cmu08g0982 264 FunFam 14-3-3 protein epsilon 3 250 - -
Cmu08g0982 264 Gene3D - 1 249 IPR036815 -
Cmu08g0982 264 Coils Coil 196 216 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g2430 Cmu-Chr5:33394200 Cmu08g0982 Cmu-Chr8:22088518 4.10E-130 dispersed
Cmu07g0327 Cmu-Chr7:3210819 Cmu08g0982 Cmu-Chr8:22088518 8.70E-109 dispersed
Cmu08g0982 Cmu-Chr8:22088518 Cmu11g1416 Cmu-Chr11:26385244 2.10E-102 dispersed
Cmu08g0982 Cmu-Chr8:22088518 Cmu08g1050 Cmu-Chr8:22805203 2.40E-106 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu08g0982 K06630 - csv:101221858 511.531