Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu08g1050 ATGGAGAAGGAGAGAGAGCACCTTGTTTACTTGGCTAGACTTGCAGAACAAGCTGAGAGATATGATGAAATGGTGGAAATGATGAAGAGCGTTGCAAAGTTGGATGTAGAACTTACCGTGGAGGAGAGGAACCTGGTCTCTGTGGGATATAAGAATGTTATTGGGGCAAGAAGAGCCTCATGGCGTATTTTATCTTCTATTGAACAAAAGGAGGAAGGAAAGAAGAACGAGGTTAATGTGAAGAGGGTAAAGGAGTACAGGCAGAGGGTTGAAGACGAACTGGCGAGAATTTGCCAGGACATCTTAACTGTTGTTGACAAGCATCTCATTCCATCTTCATCCTCTGGAGAATCCAATGTTTTTTACTATAAGATGAAGGGGGATTATAACCGATACTTAGCGGAGTTTAAATCTGGCCGTGAACGTGAAGAAGCTGCAGACCAGTCGATGAAGGCCTATGAGTCTGCCTCAAGCATTGCAAGCTCTGATCTGCCTCCAACACACCCCATCAGACTTGGCTTGGCGCTTAACTTTTCTGTTTTCTACTATGAGATATTAAATTCCCCAGAGAGGGCGTGCCACCTTGCTAAACAAGCTTTTGATGATGCCATAGCTGAACTCGACGGCCTCAATGAAGAATCCTACAAGGACAGTACCCTCATTATGCAGCTGCTGAGGGATAATCTAACGTTATGGACCTCAGATCTCCCAGATGAGGGAGGTGAGCAATCTAAAGCTGCTGATGAACCTTGA 753 45.02 MEKEREHLVYLARLAEQAERYDEMVEMMKSVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEGKKNEVNVKRVKEYRQRVEDELARICQDILTVVDKHLIPSSSSGESNVFYYKMKGDYNRYLAEFKSGREREEAADQSMKAYESASSIASSDLPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDDAIAELDGLNEESYKDSTLIMQLLRDNLTLWTSDLPDEGGEQSKAADEP 250
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 22805203 22807502 - CmPI595203_08g010500.1 Cmu08g1050 422536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu08g1050 250 Gene3D - 1 246 IPR036815 -
Cmu08g1050 250 SUPERFAMILY 14-3-3 protein 4 235 IPR036815 -
Cmu08g1050 250 PIRSF 14-3-3 1 247 IPR000308 -
Cmu08g1050 250 PANTHER 14-3-3 PROTEIN 4 238 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Cmu08g1050 250 ProSitePatterns 14-3-3 proteins signature 2. 215 234 IPR023409 -
Cmu08g1050 250 PRINTS 14-3-3 protein zeta signature 179 205 IPR000308 -
Cmu08g1050 250 PRINTS 14-3-3 protein zeta signature 206 235 IPR000308 -
Cmu08g1050 250 PRINTS 14-3-3 protein zeta signature 86 110 IPR000308 -
Cmu08g1050 250 PRINTS 14-3-3 protein zeta signature 37 66 IPR000308 -
Cmu08g1050 250 PRINTS 14-3-3 protein zeta signature 117 139 IPR000308 -
Cmu08g1050 250 PRINTS 14-3-3 protein zeta signature 152 178 IPR000308 -
Cmu08g1050 250 Pfam 14-3-3 protein 11 233 IPR023410 -
Cmu08g1050 250 ProSitePatterns 14-3-3 proteins signature 1. 43 53 IPR023409 -
Cmu08g1050 250 FunFam 14-3-3 protein epsilon 1 246 - -
Cmu08g1050 250 SMART 1433_4 5 246 IPR023410 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu08g1050 Cmu-Chr8:22805203 Cmu08g1062 Cmu-Chr8:22922714 4.60E-91 dispersed
Cmu05g2430 Cmu-Chr5:33394200 Cmu08g1050 Cmu-Chr8:22805203 1.50E-108 transposed
Cmu07g0327 Cmu-Chr7:3210819 Cmu08g1050 Cmu-Chr8:22805203 5.50E-111 transposed
Cmu08g0982 Cmu-Chr8:22088518 Cmu08g1050 Cmu-Chr8:22805203 2.40E-106 transposed
Cmu11g1416 Cmu-Chr11:26385244 Cmu08g1050 Cmu-Chr8:22805203 1.50E-110 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu08g1050 K06630 - csv:101222677 464.922