Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu08g1134 ATGGTGATGCCGGAGTCCTCTGAGGGCCACCGGACGGCGTCTCGTCGAGCGAATCGACCGCCGACTCGACCGCTTGTCGCACCTAGGGTTCCGCTGAGACGGTTACTCCGCGTCGCATCTATCGCATGTGGAATTCAATTCGGTTGGGCTTTGCAGCTCTCTCTTCTCACTCCTTATATTCAAGAGCTCGGTATTCCTCACGCTTGGTCTAGTCTCATATGGCTCTGCGGACCGCTTTCCGGCCTCTTTGTCCAACCACTTGTTGGTCATATGAGCGATCACTGCACCAGCCGATACGGCCGCCGGAGGCCGTTCATCGTCGTTGGAGCGCTTTCTATAGTACTCGCCGTTTTGATTATTGGTTACTCGGCGGACCTCGGTTGGTTGATTGGTGACAGAGGTGATGTTAGGCCTCGCGCGATTGGATTCTTTGTGGTTGGTTTTTGGATTCTCGACGTTGCTAACAACGTCTCCCAGGGTCCGTGTAGAGCTCTGCTTGCTGATCTTACCGGAAAGGATCATCGAAGGAATCGAGTGGCAAATGCTTATTTTTCTCTATTTATCGCTATTGGTAATGTTTTTGGATATGCGACTGGATCTTTTAGTGGCTGGTACAAGATCTTCCCGTTTACTCGTACCTCTGCATGTTCTGTTAATTGTGCAAATCTCAAGTCAGCTTTCTTGATTGATATTGTGTTCATTGCAATTACAACATATTTGAGTGTATCAGCAGCTCAAGAGTTGCCTCTAGTTTCAAGCGACAGGTCCTCCCTGGTTTTAGAAGAAGGTATGGGGCAGTCAAGTCATGCTTCAGAAGCATTTCTCTGGGACTTGTTACGGACTTTTAGACACTTCTCTGGGTATATATGGGTAATTTTGCTTGTCACTTCCCTGACATGGATAGCATGGTTCCCATTTATTCTCTTTGATACTGATTGGATGGGTAGAGAGATCTATGGTGGCAAGCCAAATGAAGGACAGGCTTATAGTTCTGGAGTCAGAATGGGAGCATTTGGTCTGATGTGTAACTCTGTTGTCCTCGGAATAACTTCATTACTTATGGAGAAGCTGTGCAGAAAGTGGGGTGCTGGTTTCATATGGGGAATCTCTAATATTTTTATGGGTCTATGTTTTCTTACTATCCTGGTTGTTACGTATGTGGCAAACAATATGGGCTATATAGGTCATGATCTCCCACCAAATAGTATTGTATCAGCTGCATTGATTATCTTTGCTCTTCTTGGCGCCCCTTTGGCAATTACTTACAGTGTTCCATATGCCATGATCTCCTCACGTGTTGAATCTTTACAACTTGGTCAAGGTTTGTCTGCGGGTGTCTTGAACTTAGCAATAGTTTTCCCACAGGTTGTGGTGTCCCTGGGAAGTGGACCATGGGATCAGCTGTTTGGTGGTGGAAACTCTCCAGCTTTTGCTGTAGCAGCACTTGCAGCCTTTGCAAAACCCCAGAAACCTCACATGAGAATATTTGAAAAGCTTGGTTGGTGTGCATCTCATCCATGA 1521 46.61 MVMPESSEGHRTASRRANRPPTRPLVAPRVPLRRLLRVASIACGIQFGWALQLSLLTPYIQELGIPHAWSSLIWLCGPLSGLFVQPLVGHMSDHCTSRYGRRRPFIVVGALSIVLAVLIIGYSADLGWLIGDRGDVRPRAIGFFVVGFWILDVANNVSQGPCRALLADLTGKDHRRNRVANAYFSLFIAIGNVFGYATGSFSGWYKIFPFTRTSACSVNCANLKSAFLIDIVFIAITTYLSVSAAQELPLVSSDRSSLVLEEGMGQSSHASEAFLWDLLRTFRHFSGYIWVILLVTSLTWIAWFPFILFDTDWMGREIYGGKPNEGQAYSSGVRMGAFGLMCNSVVLGITSLLMEKLCRKWGAGFIWGISNIFMGLCFLTILVVTYVANNMGYIGHDLPPNSIVSAALIIFALLGAPLAITYSVPYAMISSRVESLQLGQGLSAGVLNLAIVFPQVVVSLGSGPWDQLFGGGNSPAFAVAALAAFAKPQKPHMRIFEKLGWCASHP 506
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 23727452 23732566 - CmPI595203_08g011340.1 Cmu08g1134 422620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu08g1134 506 CDD MFS_SLC45_SUC 35 474 - -
Cmu08g1134 506 Pfam MFS/sugar transport protein 47 444 - -
Cmu08g1134 506 FunFam Sucrose transport protein 29 489 - -
Cmu08g1134 506 NCBIfam sucrose/proton symporter 30 486 IPR005989 GO:0005886(InterPro)|GO:0008515(InterPro)|GO:0015770(InterPro)
Cmu08g1134 506 PANTHER SUGAR TRANSPORTER 27 486 - GO:0005773(PANTHER)|GO:0005886(PANTHER)|GO:0008506(PANTHER)|GO:0016020(PANTHER)
Cmu08g1134 506 Gene3D MFS general substrate transporter like domains 32 487 IPR036259 -
Cmu08g1134 506 MobiDBLite consensus disorder prediction 1 25 - -
Cmu08g1134 506 SUPERFAMILY MFS general substrate transporter 33 485 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu08g1134 Cmu-Chr8:23727452 Cmu11g0973 Cmu-Chr11:14174638 5.60E-128 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu08g1134 K15378 - csv:101220384 897.886