Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu08g1193 ATGTGGAGTCAGAAGCAATCAATTGGTGGTAAGGAAAGGAAAGAGCTGGCCACTGGCAATCAATTAGTGGGAATCGCCATTGACAAGGATAAAGGAAGTCAAGTTGCTCTCAAATGGGCCACTGAGAATCTCCTTGTAAAGGGCCAAACTGCCATTCTCATCCACGTTAAACTCCGACCTTCCTCCTATCCTGGCTCTTCTCTCGCTACCCCTAAGGTGATGTCGGCATCTGATGCTGGCAGTGGCAATGGCAATGTTATGGTAAGCAAGGATATGGATCCGAGCACAAGGGATTTGTTCCTTCCTTTTCGCTGCTTCTGTACGCGTAAAGATATATTTTGCAAAGACATCGTCCTTGAAGATTTAGACGTTGCAAAAGCGTTGATCGAATATGTCACTCAGGCTGGAATTGAGAATTTGGTTGTTGGTGCCACGGCTAAAAGTGGCTTCTTGAGATTCAAGACGACAGATATTCCAGGCAGTGTTGTCAAAGGAGCACCAGATTTCTGCAATGTTTATGTCATATCAAGAGGGAAAATCCAAACAATGCGATCAGCCTCACGTCCTGCTCCCGCTTCGTCTCCTCTACGAAGTTTATTGCTGAGCCAAGCTGGTATCAAATCACATTCAGCAGAGTCACCAGTTCCTCAGATTCAAAGACCTGAAAAGCCTCCCCTTGAAGCAGCACGTAGATCTCAGGACAACATCGAGTTCAGGTCGCCATTCACTAGGAAAGGCTACAATGGAAAAATGCCAGGGGAAGTCAGTCAGCCAGATACTGATATTTCTTTCGTTAGCTCGGGAAGGCCGAGTGTTGATAGATTATTCCCTACATTGTATGACAACCTGGATACAGGAAGGGTTCCCCCGCGGCTGTCCAGTGGCAACGATGCTGATATATACAATAGCTTCGAGTCACAGCAGTTCGGACGCAAATCATTGGATGTAAACTATCCACCTGAATTTTTATCGGTCTTCTCAGAAGGTGACAGATTGTCGACTTCGTCACAGAGTATGGAAGAAGTAGAGGCTGAAATGAGGAGGCTGAAGCTGGAACTAAAGCAAACCATGGAAATGTATAGCACAGCCTGCAAGGAAGCACTAACAGCTAAACAAAAGGCAATAGAGCTTCAACGATGGAAATCTGAGGAAGAGCGTAGAATAGAGGAGGCAAGACTTGCAGAGGAAGCTGCATTAGCGATGGTTGAGCAGGAAAAGGCGAAGTCTCGAGCTGCTATTGAGGCTGCTGAGGCAGCTAAAAGGATCGCTGAGTTGGAAGCACAGAAGAGAATTAATGCGGAAAAGAAAGCATTCAAGGAAGCAGAAGAGAAGAAGAAGGCATTAGATGCTTTGGCAAACAATGATGTCAGGTATCGGAAGTACTCAATTGACGAGATTGAAACTGCTACTGAGTTTTTTTCAGAATCTTTAAAGATTGGAGAGGGAGGTTATGGCCCTGTTTATAAAGGTTATTTGGACCACACACCAGTTGCAATTAAGGTCTTACGTCCGGATGCGGCTCAAGGAAGGTCACAGTTCCAGCAAGAGGTTGAAGTACTAAGCTGCATACGACATCCTAACATGGTTCTTCTCCTTGGAGCATGCCCCGAATATGGCTGCTTGGTCTATGAGTTCATGGCACATGGTAGCTTGGATGACTGCCTCTTTCGCCGAAGAGAAAACTCAAAACCTCTTTCTTGGCAACGTAGATTCAAAATTGCAGCTGAAATTGGCACTGCCTTGTTGTTCCTCCACCAGACTAAGCCTGAGCCTCTTGTGCACCGTGATTTGAAACCGGCCAACATCTTGCTCGATCGTAACTATGTTAGCAAGATTAGCGACGTTGGTTTGGCCAGGCTTGTTCCCCCATCTGTAGCCGACAGTGTGACACAATATAGAATGACTTCAACTGCTGGCACATTCTGTTATATCGATCCCGAGTATCAACAAACGGGCATGCTTGGTGTAAAGTCCGACATATATTCATTGGGAATCATGTTTTTGCAGTTGATTACAGCAAGAGCACCCATGGGATTGACTCACCATGTGGGAAGAGCTATTGAGAAAGGGACTTTGTCGGAAATTCTTGATCCATCTGTTACCGATTGGCCAGCTGAAGAAACGTTATGCTTTGCAGAGTTGGCTTTAAAATGTGCAGAGTTGAGAAGGAAAGACCGACCTGATCTCGGTAAGGTTGTTCTCCCAGAGCTCATCAGATTTCAATCGCTAGCCGAAGCCAGCATGTACACACTGGTGAAGGACGGTGTTAGCAGCCCTGTGTTCAGCCACAGCCAGGACGGCGAATGTTTTTCCTCACAATCTAGCGATAGACATGGAGTCTTATCACGCTCAGCGCCGTAG 2361 46.25 MWSQKQSIGGKERKELATGNQLVGIAIDKDKGSQVALKWATENLLVKGQTAILIHVKLRPSSYPGSSLATPKVMSASDAGSGNGNVMVSKDMDPSTRDLFLPFRCFCTRKDIFCKDIVLEDLDVAKALIEYVTQAGIENLVVGATAKSGFLRFKTTDIPGSVVKGAPDFCNVYVISRGKIQTMRSASRPAPASSPLRSLLLSQAGIKSHSAESPVPQIQRPEKPPLEAARRSQDNIEFRSPFTRKGYNGKMPGEVSQPDTDISFVSSGRPSVDRLFPTLYDNLDTGRVPPRLSSGNDADIYNSFESQQFGRKSLDVNYPPEFLSVFSEGDRLSTSSQSMEEVEAEMRRLKLELKQTMEMYSTACKEALTAKQKAIELQRWKSEEERRIEEARLAEEAALAMVEQEKAKSRAAIEAAEAAKRIAELEAQKRINAEKKAFKEAEEKKKALDALANNDVRYRKYSIDEIETATEFFSESLKIGEGGYGPVYKGYLDHTPVAIKVLRPDAAQGRSQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEFMAHGSLDDCLFRRRENSKPLSWQRRFKIAAEIGTALLFLHQTKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYRMTSTAGTFCYIDPEYQQTGMLGVKSDIYSLGIMFLQLITARAPMGLTHHVGRAIEKGTLSEILDPSVTDWPAEETLCFAELALKCAELRRKDRPDLGKVVLPELIRFQSLAEASMYTLVKDGVSSPVFSHSQDGECFSSQSSDRHGVLSRSAP 786
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 24359784 24364737 + CmPI595203_08g011930.1 Cmu08g1193 422679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu08g1193 786 ProSiteProfiles Protein kinase domain profile. 473 738 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu08g1193 786 PANTHER OS02G0152300 PROTEIN 25 753 IPR051348 -
Cmu08g1193 786 Coils Coil 399 454 - -
Cmu08g1193 786 Gene3D Phosphorylase Kinase; domain 1 451 545 - -
Cmu08g1193 786 Gene3D HUPs 21 175 IPR014729 -
Cmu08g1193 786 SMART serkin_6 473 738 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu08g1193 786 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 445 545 - -
Cmu08g1193 786 Pfam Protein kinase domain 476 728 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu08g1193 786 MobiDBLite consensus disorder prediction 767 786 - -
Cmu08g1193 786 SUPERFAMILY Protein kinase-like (PK-like) 457 733 IPR011009 -
Cmu08g1193 786 Pfam Universal stress protein family 23 167 IPR006016 -
Cmu08g1193 786 Gene3D Transferase(Phosphotransferase) domain 1 546 748 - -
Cmu08g1193 786 CDD STK_N 22 178 - -
Cmu08g1193 786 Coils Coil 332 359 - -
Cmu08g1193 786 ProSitePatterns Serine/Threonine protein kinases active-site signature. 592 604 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu08g1193 786 MobiDBLite consensus disorder prediction 208 232 - -
Cmu08g1193 786 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 25 176 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g2688 Cmu-Chr5:35385732 Cmu08g1193 Cmu-Chr8:24359784 2.10E-296 dispersed
Cmu08g1193 Cmu-Chr8:24359784 Cmu11g1150 Cmu-Chr11:21749267 8.50E-216 dispersed
Cmu08g1193 Cmu-Chr8:24359784 Cmu08g0944 Cmu-Chr8:21775898 1.60E-198 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75737 PF00069 Pkinase 2.30E-38 CL0016 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu08g1193 - - - 0.0