Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu08g1313 ATGGCAGGTTTCTCAAGAGCTCTGTTTCTTCTCACCTTCCTCCTCTTCAGCTTCTCAGAAGCTAGAGAGATATTGATCGGAGGCAAATCCGACGCCTGGAAAATTCCTTCGTCTCAATCTCAATCTCTCAATCAATGGGCTGAAGCCTCCCGCTTTCGCATCGGCGACACTCTCGTGTGGAATTACGAAGAAGGGAAAGATTCGGTACTGAAAGTGAGGAAGGAAGATTACGAAGCCTGCAATACCGTAAGCCCAGAACAGAGATTTGAGGATGGGAATACGAAAGTTGAGCTACAGAGACCAGGGCCATTTTATTTCATCAGTGGGGCAAAGGGCCATTGCGAGCAGGGCCAGAAGCTGATCGTTGTGGTTGTGACTCCTCGCCGCAGGTTCATCGGCATCTCTTCGGCGCCTTCTCCCGCGGAGAGTGAGGGTCCGGCGGTTGCTCCGTCGAGTGGAGCTGCAAATTTGAAGGTTGGACTTTTGGCGGTGATCGTCGGAATTTTGGGTGTTGGAATTGGTTTGTTGTGA 531 51.04 MAGFSRALFLLTFLLFSFSEAREILIGGKSDAWKIPSSQSQSLNQWAEASRFRIGDTLVWNYEEGKDSVLKVRKEDYEACNTVSPEQRFEDGNTKVELQRPGPFYFISGAKGHCEQGQKLIVVVVTPRRRFIGISSAPSPAESEGPAVAPSSGAANLKVGLLAVIVGILGVGIGLL 176
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 25407403 25408013 + CmPI595203_08g013130.1 Cmu08g1313 422799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu08g1313 176 FunFam Early nodulin-like protein 1 21 129 - -
Cmu08g1313 176 PANTHER BLUE COPPER PROTEIN 16 134 IPR039391 GO:0009055(InterPro)|GO:0046658(PANTHER)
Cmu08g1313 176 SUPERFAMILY Cupredoxins 21 125 IPR008972 -
Cmu08g1313 176 Gene3D - 21 128 IPR008972 -
Cmu08g1313 176 CDD OsENODL1_like 22 124 IPR041846 -
Cmu08g1313 176 Pfam Plastocyanin-like domain 33 118 IPR003245 GO:0009055(InterPro)
Cmu08g1313 176 ProSiteProfiles Phytocyanin domain profile. 22 126 IPR003245 GO:0009055(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g1522 Cmu-Chr5:23378614 Cmu08g1313 Cmu-Chr8:25407403 2.50E-25 dispersed
Cmu08g1313 Cmu-Chr8:25407403 Cmu09g1877 Cmu-Chr9:34894225 6.70E-20 dispersed
Cmu08g1313 Cmu-Chr8:25407403 Cmu10g1367 Cmu-Chr10:6645634 3.30E-27 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu08g1313 - - - 0.0