Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu08g1354 ATGTTTAATAATCTCATCTTCACCTTTATTCTCCTTTTTTCCTCCCTTCTTCCCTCTTTCAATGCCTTGAGCCATCATTACTATGACCACACATGCCCTAATCTCGAGTCCATTGTTGCCCGAGAAGTCCACTTAGCCACTGCCAACGACAAGACCGTCCCTGCTGCATTGCTTCGAATGCACTTCCATGATTGTTTCATTAGAGGTTGTGATGGCTCTGTGCTTCTCGACTCCAAGGGAAAGAACACAGCCGAAAAAGATGGCCCTCCCAACATATCCCTCCATGCTTTTTATGTCATTGACAATGCCAAGAAAGCCATTGAATCTACCTGCCCTGGCGTCGTTTCTTGCGCTGATATCTTAGCCCTTGCTGCTCGAGATGCCGTTGTTTTGTCTGGAGGTCCTCATTGGGAAGTCCCAAAAGGAAGAAAAGATGGAAGAATCTCAAAAGCTATTGAAACTAGACAATTACCAGCTCCCACATTCAACTTCTCTCTGCTCCAACAAAGCTTCTCCCAAAGGGGCCTTTCTTTACAAGATCTTGTTGCTCTTTCAGGCGGCCACACTCTTGGATTTGCTCATTGCTCGTCGTTCCAAAACCGAATCCACAACTTCAACTCGAGCCTCGACGTCGACCCGTCATTGCAGCCGGCATTTGCGGCCAGCCTCCGGAGCATATGTCCGGCGAGAAACAAGGTGAAAAATGCGGGTTCGGCCATGGATTCAACTTCCACAGTATTTGACAATGTATATTTCAAGCTTCTTCTACAAGGGCGGAGCATTTTTTCATCAGATCAATCTTTGCTTTCAAATCCCAAAACAAAAGCTTTGGTTTCAAGATTTGCGAATGAACAACATCTCTTTGAGAAGGCTTTTGTGAAGTCAATGGTGAAGATGAGTCAGATCGCCGGCGCCGGCCAAGAAGTCCGGCTAAACTGCAGGGTGGTCAGATGA 954 46.65 MFNNLIFTFILLFSSLLPSFNALSHHYYDHTCPNLESIVAREVHLATANDKTVPAALLRMHFHDCFIRGCDGSVLLDSKGKNTAEKDGPPNISLHAFYVIDNAKKAIESTCPGVVSCADILALAARDAVVLSGGPHWEVPKGRKDGRISKAIETRQLPAPTFNFSLLQQSFSQRGLSLQDLVALSGGHTLGFAHCSSFQNRIHNFNSSLDVDPSLQPAFAASLRSICPARNKVKNAGSAMDSTSTVFDNVYFKLLLQGRSIFSSDQSLLSNPKTKALVSRFANEQHLFEKAFVKSMVKMSQIAGAGQEVRLNCRVVR 317
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 25760689 25761964 - CmPI595203_08g013540.1 Cmu08g1354 422840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu08g1354 317 FunFam Peroxidase 158 299 - -
Cmu08g1354 317 CDD secretory_peroxidase 23 316 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cmu08g1354 317 Pfam Peroxidase 40 283 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu08g1354 317 ProSiteProfiles Plant heme peroxidase family profile. 22 317 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu08g1354 317 PANTHER PEROXIDASE 25-RELATED 24 313 IPR000823 GO:0004601(InterPro)|GO:0004601(PANTHER)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Cmu08g1354 317 ProSitePatterns Peroxidases proximal heme-ligand signature. 180 190 IPR019793 -
Cmu08g1354 317 Gene3D Peroxidase, domain 2 158 299 - -
Cmu08g1354 317 PRINTS Haem peroxidase superfamily signature 133 145 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu08g1354 317 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu08g1354 317 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu08g1354 317 PRINTS Haem peroxidase superfamily signature 180 195 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu08g1354 317 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu08g1354 317 Gene3D - 26 316 - -
Cmu08g1354 317 PRINTS Plant peroxidase signature 294 307 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu08g1354 317 PRINTS Plant peroxidase signature 133 148 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu08g1354 317 PRINTS Plant peroxidase signature 114 124 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu08g1354 317 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu08g1354 317 PRINTS Plant peroxidase signature 179 191 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu08g1354 317 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu08g1354 317 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu08g1354 317 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu08g1354 317 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu08g1354 317 FunFam Peroxidase 26 161 - -
Cmu08g1354 317 SUPERFAMILY Heme-dependent peroxidases 23 316 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g0869 Cmu-Chr5:7926605 Cmu08g1354 Cmu-Chr8:25760689 5.80E-95 dispersed
Cmu08g1354 Cmu-Chr8:25760689 Cmu09g1510 Cmu-Chr9:27852788 2.90E-66 dispersed
Cmu01g1995 Cmu-Chr1:33196653 Cmu08g1354 Cmu-Chr8:25760689 1.80E-119 transposed
Cmu04g0350 Cmu-Chr4:11052001 Cmu08g1354 Cmu-Chr8:25760689 3.60E-72 transposed
Cmu01g1985 Cmu-Chr1:33118701 Cmu08g1354 Cmu-Chr8:25760689 2.30E-10 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu08g1354 K00430 - csv:101214403 570.852