Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu08g1420 ATGGGATCTACTGTTTTCCACTTTCTTCAAGATCAGTGTTTCTTGTCTGTTCTAATGCTGTACCTTATATCTGTTTGCCTTTTGTTGAGCTTCGTTATAGCTGATTATAGTTACATCAACGTGTTCTTGATGGGAATGGCGACCCCTGTAGAGCCTCCAAATGGGGTTAGATCTCAAGGAAAACATTACTTTTCAATGTGGCAGACATTGTTTGAGATTGATACTAAATATGTACCTATCAAGCCGATTGGTCGAGGGGCATATGGTATTGTGTGTTCTTCTGTGAACAGGGAAACAAATGAGAAAGTTGCGATAAAGAGGATACATAATGCGTTTGAGAATCGTATTGATGCGCTCCGGACTTTGCGCGAATTGAAACTCCTTAGGCATCTTCGCCACGAAAATGTCATATGTTTGAAAGATGTGATGATGCCTATCCATAGGAGAAGTTTCAAAGATGTTTATTTGGTTTATGAACTGATGGATACTGATCTGCATCAGATTATTAAGTCTTCTCAAACTCTTACAAACGACCACTGCCAATATTTCCTCTTTCAGTTGCTCCGAGGCCTAAAGTATCTGCATTCTGCGAACATCCTACATCGGGACTTGAAGCCAGGGAACCTCCTTGTCAATGCAAATTGTGATCTTAAGATATGTGATTTTGGGTTAGCGCGTACGAGCAATGGGAAGAATCAATTTATGACAGAGTATGTTGTAACTCGCTGGTATCGAGCCCCAGAACTGCTGCTCTGCTGCGAGAATTACGGGACGTCAATTGATGTGTGGTCTGTAGGATGCATCTTTGCCGAACTTCTCGGTAGGAAACCTATCTTCCCCGGTACAGAATGTCTGAATCAACTCAAATTGATAATTAACTTACTGGGTAGCCAGAGAGAGGAAGATCTTGAGTTCATAGACAATCCAAAGGCAAGAAGGTATATAAAATCCCTTCCATACTCTCCTGGGGCTCCTCTTTCCCGTCTTTATCCAAATGCTCATCCTCTTGCAATTGATCTCCTACAAAAGATGCTCGTCTTTGACCCATCAAAGAGGATTAGTGTAACTGAGGCATTGCAACATCCTTACATGTCTCCACTGTATGATCCAAACAGCAATCCTCCAGCTCAGGTGCCGATTGATCTCGACATAGATGAGGAACTTGGAGAAGAAATGATACGAGAGATGATGTGGAAAGAAATGCTTCATTACCACCCCGAGGATCTGGAAGAACACGCAGAAATGACATGTTTCCACCCCGAACATACTACAAGTAGTACTGCAGTGTATTCTTGA 1296 42.21 MGSTVFHFLQDQCFLSVLMLYLISVCLLLSFVIADYSYINVFLMGMATPVEPPNGVRSQGKHYFSMWQTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKRIHNAFENRIDALRTLRELKLLRHLRHENVICLKDVMMPIHRRSFKDVYLVYELMDTDLHQIIKSSQTLTNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCENYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINLLGSQREEDLEFIDNPKARRYIKSLPYSPGAPLSRLYPNAHPLAIDLLQKMLVFDPSKRISVTEALQHPYMSPLYDPNSNPPAQVPIDLDIDEELGEEMIREMMWKEMLHYHPEDLEEHAEMTCFHPEHTTSSTAVYS 431
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 26339756 26342694 - CmPI595203_08g014200.1 Cmu08g1420 422906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu08g1420 431 FunFam Mitogen-activated protein kinase 63 171 - -
Cmu08g1420 431 Gene3D Transferase(Phosphotransferase) domain 1 161 390 - -
Cmu08g1420 431 CDD STKc_TEY_MAPK 71 406 - -
Cmu08g1420 431 Gene3D Phosphorylase Kinase; domain 1 64 400 - -
Cmu08g1420 431 SMART serkin_6 77 364 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu08g1420 431 ProSitePatterns MAP kinase signature. 112 215 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu08g1420 431 ProSiteProfiles Protein kinase domain profile. 77 364 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu08g1420 431 FunFam Mitogen-activated protein kinase 161 390 - -
Cmu08g1420 431 ProSitePatterns Protein kinases ATP-binding region signature. 83 106 IPR017441 GO:0005524(InterPro)
Cmu08g1420 431 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 71 402 IPR050117 GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Cmu08g1420 431 Pfam Protein kinase domain 79 364 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu08g1420 431 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu08g1420 431 SUPERFAMILY Protein kinase-like (PK-like) 69 371 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu07g0868 Cmu-Chr7:21951967 Cmu08g1420 Cmu-Chr8:26339756 7.40E-168 dispersed
Cmu08g0961 Cmu-Chr8:21898827 Cmu08g1420 Cmu-Chr8:26339756 5.30E-113 dispersed
Cmu08g1420 Cmu-Chr8:26339756 Cmu09g2134 Cmu-Chr9:37458842 1.10E-87 dispersed
Cmu08g1420 Cmu-Chr8:26339756 Cmu01g0230 Cmu-Chr1:2284686 1.60E-115 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75740 PF00069 Pkinase 3.30E-71 CL0016 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu08g1420 K20535 - csv:101213478 764.222