Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu08g1425 ATGCCTTTCCTCTGCTTTTGGTGCTTTGCCGCCGCTGCTCTCTCAATCGTCGCCGTTTTTCGATTTTATCTGAAGAATAAGCCGCCGCGCTCGCGGAGTTCGCATTCTTCTCCTCCTGGAAGCAGAGGTTTGCCTCTCATTGGAGAGACGCTCCAGTTCATGGCCGCCGTCAACTGCAGCAACGGCGTTTATGATTTCGTCACAACCCGCTGCCTCCGGTACGGAGGATGCTTTAAGACTCGAATATTTGGAGAGACGCATGTGTTTGTTTCGAGCAACGAATCGGCGAAGCTTATACTCAATGACGGCGGAGGCAGGTTCACTAAGAAGTATATAAAGTCCATTGCTGAGCTAGTCGGCCATCAAAGTTTGCTTTGTGCTTCACATTTGCACCACAAATTCTTACGTAGTCGTCTCATCAATCTTTTCTCCTCTTGTTTTTTGGCCTCTTTTGTTATGCAATTCGATCAACAAATCGTTTCGACGTTTCGATGTTGGAATACCGGTTCCACCATTGTCCTCCTCAACGAAGCCCTCAAGATAACATGCAAAGCAATGTGCAAGATGCTGATAAGCTTAGAAAAGGAAAACGAAGTAGAGGCATTCCAGAAAGAGGTTGGTTATGTATGTGAAGCTATGCTTGCATTCCCATGGAGACTTCCAGGGACAAGATTCCACAAAGGCCTCAAGGCAAGAAGAAGAATCATAAAAATACTTGAAAGTATGATTCAAGAGAGACGACAATCAGAGCCTCAGCATGGAGATTTCTTACAACGGCTGTTGACAGAGGAGGACGGTGGAGAACCGCTATCAGATGCAGAGATTGGAGATAATATATTGACGATGTTGATTGCTGGACAGGATACCACGGCGAGTGCCATCACTTGGATGATGAAGTTCTTACATGAGAATCAAGATGTACTTCTAAATCTTAAGGAAGAACAATTCAGAATATTGGGCAAAAAACAAGATCATGGGAGTTGTTTCCTTACTTTGGAGGATCTAGGCAACATGCCTTATGCTGCCAAGGTAGTAAAAGAATCATTGAGGTTAGCATCTATTGTGCCATGGTTCCCAAGACTAATCCTTCACGACACTGAAATGGAAGGTTACAAAATCAAGAAAGGTTGGAATGTTAACATTGATGTGAGATCACTACATTCGGATCCTTCTCTCTATAAAGATCCTATCAAGTTTAATCCATCCAGGTTTGATGAAGAAGCAAAGCCCTTTAGCTTTCTAGCTTTTGGGATGGGAGGGAGGCAATGTCTAGGGATGAATCTAGCCAAAGCCATGATGCTTGTCTTTCTTCACCGCTTGGTGACTTATTTCAGATGGAAGGTAATCGACTCTGACTCTAGCATTGAAAAGTGGGCCCTTTTTACCAAATTAAAGAGTGGTTGTCCAATTCTCATCACACGTATTGAATCTTAA 1434 43.72 MPFLCFWCFAAAALSIVAVFRFYLKNKPPRSRSSHSSPPGSRGLPLIGETLQFMAAVNCSNGVYDFVTTRCLRYGGCFKTRIFGETHVFVSSNESAKLILNDGGGRFTKKYIKSIAELVGHQSLLCASHLHHKFLRSRLINLFSSCFLASFVMQFDQQIVSTFRCWNTGSTIVLLNEALKITCKAMCKMLISLEKENEVEAFQKEVGYVCEAMLAFPWRLPGTRFHKGLKARRRIIKILESMIQERRQSEPQHGDFLQRLLTEEDGGEPLSDAEIGDNILTMLIAGQDTTASAITWMMKFLHENQDVLLNLKEEQFRILGKKQDHGSCFLTLEDLGNMPYAAKVVKESLRLASIVPWFPRLILHDTEMEGYKIKKGWNVNIDVRSLHSDPSLYKDPIKFNPSRFDEEAKPFSFLAFGMGGRQCLGMNLAKAMMLVFLHRLVTYFRWKVIDSDSSIEKWALFTKLKSGCPILITRIES 477
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 26396008 26401220 + CmPI595203_08g014250.1 Cmu08g1425 422911
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cmu08g1425 477 PANTHER CYTOCHROME P450 26 38 444 - GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER)
Cmu08g1425 477 SUPERFAMILY Cytochrome P450 31 474 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu08g1425 477 CDD CYP90-like 70 474 - -
Cmu08g1425 477 Pfam Cytochrome P450 38 452 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu08g1425 477 PRINTS E-class P450 group I signature 382 406 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu08g1425 477 PRINTS E-class P450 group I signature 294 320 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu08g1425 477 PRINTS E-class P450 group I signature 423 446 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu08g1425 477 PRINTS E-class P450 group I signature 342 360 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu08g1425 477 PRINTS E-class P450 group I signature 274 291 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu08g1425 477 PRINTS E-class P450 group I signature 413 423 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu08g1425 477 PRINTS P450 superfamily signature 423 434 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu08g1425 477 PRINTS P450 superfamily signature 343 354 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu08g1425 477 PRINTS P450 superfamily signature 285 302 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu08g1425 477 PRINTS P450 superfamily signature 414 423 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu08g1425 477 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 416 425 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cmu08g1425 477 Gene3D Cytochrome P450 27 474 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu08g1425 Cmu-Chr8:26396008 Cmu08g1530 Cmu-Chr8:27131960 1.20E-58 dispersed
Cmu09g0926 Cmu-Chr9:9227003 Cmu08g1425 Cmu-Chr8:26396008 1.80E-84 transposed
Cmu01g1916 Cmu-Chr1:32594163 Cmu08g1425 Cmu-Chr8:26396008 7.00E-115 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu08g1425 - - - 0.0