Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu08g1466 ATGACCTCCGACGGCGCCACTTCTGCCTCCACTTGCCGGCGGAAGCCGTCTTGGAGGGAGCGGGAGAATAATCGGACCAGAGAGCGTCGGAGGAGAGCCATCGCCGCTAAGATTTACTCTGGCCTTAGGGCTCAGGGAAACTTCAATTTGCCTAAACACTGTGACAACAACGAGGTCCTTAAAGCCCTCTGTGCTGAAGCTGGTTGGACCGTCGAAGATGACGGAACCACTTATCGGAAGGGATGCAAGCCGCCCCCAATTGATATTGTTGGCACTTCAACCAAAATCACCCCTTACTCTTCCCAAAATCCAAGCCCATTGTCTTCTTCATTCCCCAGTCCTATGGGATCCTACCAAGTCAGTCCCTCCTCCTCCTCCTTCCCGAGCCCGTCCCGTCTCGACGCCAACAATCCGTCGAACCTCATTCCTTATCTTCGCCAAGCGATTCCCATATCGCTTCCTCCTCTTAGAATCTCAAACAGTGCTCCTGTAACCCCTCCCCTTTCATCCCCAGCCTCGAGGACTCCGCAGCCATTCCCCAATTGGGAAGTCACTGCTAAAGAATCCTTATCCTCCTTGAATTACCCTTTCTTTGCAGTATCTGCTCCAGCTAGCCCGACTCGACCTCAGCTCCATACTCCCGCCACGATCCACAAATTCGACGAATCTGAATCATCCACCAATGAGTCCAGTCAATGGGCACTTCTCCGTGCCTATGCACCTTCTGCATCGACAATGCCAACATCTCCCACGTTCAACCTTGTGAAACCTGCTGACCAACATGCTCTACACGATGGTTTCATCAAAGAAAATGGAAGAGGAAACGAATTTGAGTTCTTGGGCTACAAGGTTAAGCCTTGGGAAGGGGAGAAGATTCATGATGTCGGATTGGAGGATTTAGAGCTCACACTCGGTAGCGGTAAGGCTCGAAGCTAA 936 51.82 MTSDGATSASTCRRKPSWRERENNRTRERRRRAIAAKIYSGLRAQGNFNLPKHCDNNEVLKALCAEAGWTVEDDGTTYRKGCKPPPIDIVGTSTKITPYSSQNPSPLSSSFPSPMGSYQVSPSSSSFPSPSRLDANNPSNLIPYLRQAIPISLPPLRISNSAPVTPPLSSPASRTPQPFPNWEVTAKESLSSLNYPFFAVSAPASPTRPQLHTPATIHKFDESESSTNESSQWALLRAYAPSASTMPTSPTFNLVKPADQHALHDGFIKENGRGNEFEFLGYKVKPWEGEKIHDVGLEDLELTLGSGKARS 311
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 26688814 26690106 - CmPI595203_08g014660.1 Cmu08g1466 422952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu08g1466 311 MobiDBLite consensus disorder prediction 1 29 - -
Cmu08g1466 311 MobiDBLite consensus disorder prediction 14 29 - -
Cmu08g1466 311 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 12 310 IPR033264 GO:0003700(InterPro)|GO:0006351(InterPro)|GO:0009742(InterPro)
Cmu08g1466 311 MobiDBLite consensus disorder prediction 93 132 - -
Cmu08g1466 311 Pfam BES1/BZR1 plant transcription factor, N-terminal 13 136 IPR008540 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu07g1007 Cmu-Chr7:24814404 Cmu08g1466 Cmu-Chr8:26688814 2.00E-44 dispersed
Cmu01g1863 Cmu-Chr1:32215237 Cmu08g1466 Cmu-Chr8:26688814 1.30E-87 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
6719 PF05687 BES1_N 2.80E-62 No_clan Cmu TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu08g1466 K14503 - csv:101219853 533.487