Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmu08g1530 | ATGGGTTGGCCTCTAATTGGCGAGACCTTTCATTTTTATTCTCAAGATCCAACCTCCTTCTTTCTTGGAAAACAAAAAAGATATGGGGAGATATTCAAGACCCACATTCATGGATGTCCGTGTGTGATGTTAGCGACTCCCGAGGCGGCTCGGTTCGTGCTAGTGACACAGGCTCATCTCTTCAAACCTACATATCCACAAAGTAAAGAGCGATTAATTGGGCCATCGGCTCTGTTTTTCCACCAAAGTGAAACCCATTTGCGTTTGCGTAAGCTAATCCAAAGCTCTCTGTCACCGGACCCTGTTCGAGCCTTAGTCCCTGACATCCACGCCCTAGCCATCTCTGCATTGCCCTCATGGCTCAATGGCCATCTCATTAACACTTTCCATCAAATGAAGAAGTTCTCTTTTGAAGTGGGGATTTTGGCAATTTTCGGGCATTTGGAAGACACCAATTACAGAGAGGAACTAATGAAAAACTATTCCATAGTGAACAAAGGCTATAATTCTTTCCCCACCAACATTCCCGGAACGCTTTACAAAAAAGCACTTAAAGCAAGAAAGAGGCTGGGAGAGATCATAAGCTGTATAATCTCAGAGAAAAGGGAGAAAAGAAAAGAATTAGGGGAGAAGAATCTATTAGCGTGTTTGCTAAAATGGAGAGATGAAAATGGAGAAACTTTAAGTGATGAACAGATCGCCGACAACATCATCGGAGTTCTGTTTGCTGCTCAGGACACGACGGCCAGTGTTCTCACTTGGGTTGTTAAATATCTACATGATAACCACAAAGTTCTAGAAGCTGTCAAGGTGGAACAAAAGGCAATTGAAGAAGGCATTAATGAAGGGAGCCGACCAATGAGCTGGGCTCAGACACGAAACATGCCCTTTACCAACAAGGTGGTGTTGGAGAGCTTGAGAATGGCGAGTATTATATCATTCACTTTTAGAGAAGCTGTGGCAGATGTTGAATATAAAGGATATTTAATTCCAAAGGGTTGGAAAGTAATGCCTTTGTTCAGGAATATTCACCACAATCCTGACTACTTTGTTGACCCTCATAAATTTGATCCTTCAAGATTTGAGGTTGCTCCAAGACCCAATACGTTCATGCCATTTGGCAGTGGGGTCCATGCCTGCCCAGGAAATGACCTTGCCAAGCTTGAAATCTTGATCATGATCCACCATCTAGTCACCAAATTCAGGTGGGAATTGGCAGGACAGAGAGATGGGATTCTGCATGGGCCTTTTCCAGTGCCTATGAATGGGCTTCCCATTAGAGTCTGGAGATTATCCACTTGA | 1302 | 43.7 | MGWPLIGETFHFYSQDPTSFFLGKQKRYGEIFKTHIHGCPCVMLATPEAARFVLVTQAHLFKPTYPQSKERLIGPSALFFHQSETHLRLRKLIQSSLSPDPVRALVPDIHALAISALPSWLNGHLINTFHQMKKFSFEVGILAIFGHLEDTNYREELMKNYSIVNKGYNSFPTNIPGTLYKKALKARKRLGEIISCIISEKREKRKELGEKNLLACLLKWRDENGETLSDEQIADNIIGVLFAAQDTTASVLTWVVKYLHDNHKVLEAVKVEQKAIEEGINEGSRPMSWAQTRNMPFTNKVVLESLRMASIISFTFREAVADVEYKGYLIPKGWKVMPLFRNIHHNPDYFVDPHKFDPSRFEVAPRPNTFMPFGSGVHACPGNDLAKLEILIMIHHLVTKFRWELAGQRDGILHGPFPVPMNGLPIRVWRLST | 433 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 27131960 | 27136311 | - | CmPI595203_08g015300.1 | Cmu08g1530 | 423016 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmu08g1530 | 433 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 373 | 382 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cmu08g1530 | 433 | Pfam | Cytochrome P450 | 3 | 409 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu08g1530 | 433 | PRINTS | P450 superfamily signature | 243 | 260 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu08g1530 | 433 | PRINTS | P450 superfamily signature | 300 | 311 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu08g1530 | 433 | PRINTS | P450 superfamily signature | 371 | 380 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu08g1530 | 433 | PRINTS | P450 superfamily signature | 380 | 391 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu08g1530 | 433 | Gene3D | Cytochrome P450 | 1 | 431 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu08g1530 | 433 | FunFam | Abscisic acid 8 | 1 | 430 | - | - | |
| Cmu08g1530 | 433 | PRINTS | E-class P450 group I signature | 339 | 363 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu08g1530 | 433 | PRINTS | E-class P450 group I signature | 299 | 317 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu08g1530 | 433 | PRINTS | E-class P450 group I signature | 370 | 380 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu08g1530 | 433 | PRINTS | E-class P450 group I signature | 25 | 44 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu08g1530 | 433 | PRINTS | E-class P450 group I signature | 380 | 403 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu08g1530 | 433 | PRINTS | E-class P450 group I signature | 232 | 249 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu08g1530 | 433 | PANTHER | CYTOCHROME P450 26 | 1 | 407 | - | GO:0004497(PANTHER)|GO:0010295(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER) | |
| Cmu08g1530 | 433 | CDD | CYP90-like | 25 | 428 | - | - | |
| Cmu08g1530 | 433 | SUPERFAMILY | Cytochrome P450 | 2 | 429 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmu07g1095 | Cmu-Chr7:25998880 | Cmu08g1530 | Cmu-Chr8:27131960 | 8.10E-150 | dispersed | |
| Cmu08g1425 | Cmu-Chr8:26396008 | Cmu08g1530 | Cmu-Chr8:27131960 | 1.20E-58 | dispersed | |
| Cmu08g1530 | Cmu-Chr8:27131960 | Cmu09g0926 | Cmu-Chr9:9227003 | 1.10E-76 | dispersed | |
| Cmu03g1755 | Cmu-Chr3:23202863 | Cmu08g1530 | Cmu-Chr8:27131960 | 1.00E-62 | transposed | |
| Cmu02g0628 | Cmu-Chr2:6130004 | Cmu08g1530 | Cmu-Chr8:27131960 | 6.30E-174 | wgd | |
| Cmu05g2048 | Cmu-Chr5:30172088 | Cmu08g1530 | Cmu-Chr8:27131960 | 6.00E-173 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmu08g1530 | K09843 | - | vvi:100245540 | 667.537 |