Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu08g1536 ATGAATTTCAAGGATTTTGGGAATGACCCATCTGCCGGAAACGGCGGAGGAGGCGGAAGACCTCCGGCGAACTATCCATTAGCGCGACAATCATCGATCTACTCGCTGACCTTCGATGAGTTTCAGAGCATGGGGAGTATAGGCAAGGATTTTGGGTCGATGAACATGGATGAGCTGTTGAAGAACATTTGGAGCGCTGAAGAAATGCAAACGATGGCATCTTCTGCTGCTGCTGTTGATAAAGAAGGGGCTGGTAGTGTTGGTCGTAGTGGTGGGTATTTGCAGAGACAGGGCTCCTTGACGCTGCCTCGGACACTCAGCCAGAAGAAGGTGGATGAGGTATGGAAGGACATAATCAATGAACATGCTAGTGCTAAAGATGGGGCTACTGTTGCTTCTAATTTGCAACAGAGGCAGCAAACTCTTGGGGAGATGACACTTGAAGAGTTTTTATTCAGAGCTGGAGTGGTGAGAGAGGATACTCAGGTGACTGCAAACCCCAACAATGGAGGGTTCTTTGGCAATAACACTGGTTTTGGAATTGGTTTTCAGCGGCAGGCTAAAGTTCCTGAGAATAATAATCATATTCCAATTCAATCGTCGAACTTATCGCTGAATGTCAATGGAGTCAGAACACATCAGCCGCAGCCAATTTTTCCAAAGCAGCCTGCTGTGACATATGGATCTCAGTTGGCTTTACCCAGTGATGGTCAGCTGGCTAGTCCAGGAATTAGAGGGGGAATTATGGGGATTGGAGATCAAGGGTTGAATACAAATTTGATGCAAGGCTCTGCACTGCAGGGTGGAAGAATGGGAGTGGTTAATATAGCAGCTGCTCCGTTACCTATTGCAACAGAATCGCCAAGGGACCAACTATCATCTGATGGGATTGGTAAAAGCAATGGTGATACCTCGTCTGTGTCTCCTGTGCCTTACGCGCTTAATGGTGGAATCAGGGGGAGGAGAAGTAACGGAATTGTCGACAAGGTTGTCGAGAGGAGGCAACGGAGAATGATTAAAAACAGAGAGTCCGCTGCAAGATCGCGGGCTCGAAAGCAGGCCTACACAATGGAATTGGAAGCAGAAGTTGCAAAGCTAAAAGAGGAGAACCAAGAACTCCGGCAAAAACAGGCAGAAATCATGGAAATGCAGAAGAACCGGGCATTGGAAGTAATGGATAAGCAACAAGGAATAAAGAAGCGATGCTTAAGACGAACGCAGACTGGCCCATGGTGCCGTGTAGCATATGTCTCAAGGCGTCTTGCTTGCAGAGTATCCTCCTCCACCCTCTGCCATGGAGAGGGAAATAAGTTTTTTGTGGCATTTCCTGATATGGCCCGACTGCTGCTGTGGTTGTGGGTAAATGTCAATCCTGAATGCAGGATTCATCAGCGTTCAATTCATTGCATGTCAACTGCTGCAACTGCCGTTCGATTTTCCTTTGTAATCTCTGCATCATGA 1461 47.43 MNFKDFGNDPSAGNGGGGGRPPANYPLARQSSIYSLTFDEFQSMGSIGKDFGSMNMDELLKNIWSAEEMQTMASSAAAVDKEGAGSVGRSGGYLQRQGSLTLPRTLSQKKVDEVWKDIINEHASAKDGATVASNLQQRQQTLGEMTLEEFLFRAGVVREDTQVTANPNNGGFFGNNTGFGIGFQRQAKVPENNNHIPIQSSNLSLNVNGVRTHQPQPIFPKQPAVTYGSQLALPSDGQLASPGIRGGIMGIGDQGLNTNLMQGSALQGGRMGVVNIAAAPLPIATESPRDQLSSDGIGKSNGDTSSVSPVPYALNGGIRGRRSNGIVDKVVERRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEENQELRQKQAEIMEMQKNRALEVMDKQQGIKKRCLRRTQTGPWCRVAYVSRRLACRVSSSTLCHGEGNKFFVAFPDMARLLLWLWVNVNPECRIHQRSIHCMSTAATAVRFSFVISAS 486
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 27206817 27209831 + CmPI595203_08g015360.1 Cmu08g1536 423022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu08g1536 486 MobiDBLite consensus disorder prediction 1 26 - -
Cmu08g1536 486 CDD bZIP_plant_BZIP46 333 385 - -
Cmu08g1536 486 MobiDBLite consensus disorder prediction 286 315 - -
Cmu08g1536 486 Gene3D - 331 387 - -
Cmu08g1536 486 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 29 410 IPR043452 GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0045893(InterPro)
Cmu08g1536 486 SMART brlzneu 329 393 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cmu08g1536 486 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 5 331 388 - -
Cmu08g1536 486 Pfam bZIP transcription factor 333 385 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cmu08g1536 486 Coils Coil 349 386 - -
Cmu08g1536 486 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 336 351 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cmu08g1536 486 SUPERFAMILY Leucine zipper domain 333 381 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Cmu08g1536 486 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 331 382 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cmu08g1536 486 MobiDBLite consensus disorder prediction 287 311 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu08g1536 Cmu-Chr8:27206817 Cmu10g2628 Cmu-Chr10:33036518 3.40E-42 dispersed
Cmu08g0652 Cmu-Chr8:18726544 Cmu08g1536 Cmu-Chr8:27206817 2.80E-08 transposed
Cmu08g0801 Cmu-Chr8:20289566 Cmu08g1536 Cmu-Chr8:27206817 4.80E-32 transposed
Cmu10g0898 Cmu-Chr10:1028396 Cmu08g1536 Cmu-Chr8:27206817 6.70E-11 transposed
Cmu02g0637 Cmu-Chr2:6263715 Cmu08g1536 Cmu-Chr8:27206817 2.60E-91 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
6727 PF00170 bZIP_1 4.80E-13 CL0018 Cmu TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu08g1536 K14432 - csv:101223043 716.842