Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu08g1541 ATGTCCAAGAATTCTGCTGTTGAAGCTCGTGAAGGAATCTCTGATGTTGTGAATTGTCTGTTATCGTCTCTTGGTCTTCTCATATTCATTTCTAGATCAAGACTACAGGAAGAAGTAGCCATGGCTGATCAGGTTCAACATCCCACCATCTACCAGAAGGTTGCTGGTCAGCTCTCCCTTCAGTCGAGGGTTGCTTCGGGTTTCCGTTCTTGTGATGATGGCTTTAGGAACCCTGCACTTTATCAGAGGCGTGCATCAATCAGCAATCATACAAATGCTGCTTTTCAGTATCCTGCTGTGCAATCCTGTGTTGCTACTACTGATCTTTCTAGGGTTGCCTCAACTGCCTCCCCCATTTTTGTTGCTGCCCCTGCGGAGAAAGGAAACTTTATGATCGATTTTCTTATGGGTGGTGTGTCTGCTGCTGTGTCCAAGACAGCTGCTGCCCCGATTGAGCGTGTCAAGCTCTTGATTCAAAATCAGGATGAGATGATTAAATCTGGACGTTTGTCTGAGCCATACAAGGGTATTGGCGATTGTTTCAAGCGCACAATCCAGGAAGAGGGTTTCGGTTCATTGTGGAGAGGAAACACTGCCAATGTCATCCGTTATTTCCCCACTCAAGCATTGAACTTCGCTTTCAAGGATTACTTCAAGAGGCTTTTCAACTTCAAGAAAGACAGGGATGGTTACTGGAAATGGTTTGCTGGTAACCTGGCATCTGGTGGTGCTGCTGGTGCTTCATCCCTTCTTTTTGTTTACTCTCTTGACTATGCCCGTACCCGATTAGCAAACGACGCCAAAGCTGCCAAGAAAGGTGGAGAAAGGCAATTCAATGGACTGGTTGATGTCTACAGGAAGACATTGCAGTCTGATGGTATTGCCGGTCTCTACCGTGGATTTAACATTTCTTGTGTTGGTATCATCGTTTACCGTGGTTTATACTTTGGAATGTATGATTCTCTGAAGCCCGTTTTATTGACTGGGAAGATGCAGGATAGCTTCTTCGCTAGCTTTGCCTTGGGTTGGCTCATCACCAATGGTGCCGGTCTTGCATCTTACCCAATTGACACTGTTCGTAGAAGAATGATGATGACATCAGGTGAAGCAGTGAAGTACAAGAGCTCATTGGATGCCTTCTCTCAGATTTTGAAGAACGAAGGTGCCAAGTCTCTCTTTAAGGGTGCTGGTGCGAACATTCTCCGTGCCGTTGCTGGTGCTGGTGTGCTTGCCGGTTATGATAAGTTGCAGCCGCGGCAGACTCCTCCCAAATTCTCTCGCGGCCATCAGTTTCTCCCAAGGGAAGAAGTAGCCATGGCTGATCAGGTTCAACATCCCACCATCTACCAGAAGGTTGCTGGTCAGCTCTCCCTTCAGTCGAGGGTTGCTTTGGGTTTCCGTTCTTGTGATGATGGCTTTAGGAACCCTGCATTTTATCCGAGGCGTGCATCAATCAGCAATCATACAAATGCTGCTTTTCAGTATCCTGCTACTACTGATCTTTCTAGGGTTGCCTCAACTGCCTCCCCCATTTTTGTTGCTGCCCCGGCGGAGAAAGGAAACTTTATGATCGACTTTCTTATGGGTGGTGTGTCTGCTGCTGTGTCCAAGACAGCTGCTGCCCCGATTGAGCGTGTCAAGCTCTTGATTCAAAATCAGGATGAGATGATTAAATCTGGACGTTTGTCTGAGCCATACAAGGGTATTGGCGATTGTTTCAAGCGCACAATCCAGGAAGAGGGTTTCGGTTCATTGTGGAGAGGAAACACTGCCAATGTCATCCGTTATTTCCCCACTCAAGCATTGAACTTTGCTTTCAAGGATTACTTCAAGAGGCTTTTCAACTTCAAGAAAGACAGGGATGGTTACTGGAAATGGTTTGCTGGTAACCTGGCATCTGGTGGTGCTGCTGGTGCTTCATCCCTTCTTTTTGTTTACTCTCTTGACTATGCCCGTACCCGATTAGCAAACGACGCCAAAGCTGCCAAGAAAGGTGGAGAAAGGCAATTCAATGGACTGGTTGATGTCTACAGGAAGACATTGCAGTCTGATGGTATTGCTGGTCTTTACCGTGGATTTAACATCTCTTGTGTTGGTATCATCGTTTACCGTGGTTTATACTTTGGAATGTATGATTCTCTCAAGCCTGTTTTGTTGACCGGGAAGATGCAGGATAGCTTCTTCGCTAGTTTTGCCTTGGGTTGGCTCATCACCAATGGTGCTGGTCTCGCATCCTACCCAATTGACACTGTTCGTAGAAGAATGATGATGACATCAGGTGAAGCAGTGAAGTACAAGAGCTCATTGGATGCCTTCTCTCAGATCTTGAAGAACGAAGGTGCCAAGTCTCTCTTCAAGGGTGCTGGTGCTAACATTCTCCGTGCCGTTGCTGGTGCTGGTGTGCTTGCCGGTTACGATAAGTTGCAGGTGATTGTCTTTGGGAAGAAATATGGATCTGGTGGTGCCTAA 2469 46.82 MSKNSAVEAREGISDVVNCLLSSLGLLIFISRSRLQEEVAMADQVQHPTIYQKVAGQLSLQSRVASGFRSCDDGFRNPALYQRRASISNHTNAAFQYPAVQSCVATTDLSRVASTASPIFVAAPAEKGNFMIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTIQEEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTLQSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGKMQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFSQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQPRQTPPKFSRGHQFLPREEVAMADQVQHPTIYQKVAGQLSLQSRVALGFRSCDDGFRNPAFYPRRASISNHTNAAFQYPATTDLSRVASTASPIFVAAPAEKGNFMIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTIQEEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTLQSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGKMQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFSQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVIVFGKKYGSGGA 822
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 27261931 27271048 + CmPI595203_08g015410.1 Cmu08g1541 423027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu08g1541 822 SUPERFAMILY Mitochondrial carrier 128 415 IPR023395 -
Cmu08g1541 822 SUPERFAMILY Mitochondrial carrier 520 807 IPR023395 -
Cmu08g1541 822 ProSiteProfiles Solute carrier (Solcar) repeat profile. 625 717 IPR018108 -
Cmu08g1541 822 ProSiteProfiles Solute carrier (Solcar) repeat profile. 520 613 IPR018108 -
Cmu08g1541 822 PRINTS Mitochondrial carrier protein signature 298 316 IPR002067 GO:0055085(InterPro)
Cmu08g1541 822 PRINTS Mitochondrial carrier protein signature 146 160 IPR002067 GO:0055085(InterPro)
Cmu08g1541 822 PRINTS Mitochondrial carrier protein signature 342 364 IPR002067 GO:0055085(InterPro)
Cmu08g1541 822 PRINTS Mitochondrial carrier protein signature 133 146 IPR002067 GO:0055085(InterPro)
Cmu08g1541 822 PRINTS Mitochondrial carrier protein signature 196 216 IPR002067 GO:0055085(InterPro)
Cmu08g1541 822 PRINTS Mitochondrial carrier protein signature 248 266 IPR002067 GO:0055085(InterPro)
Cmu08g1541 822 FunFam ADP,ATP carrier protein, mitochondrial 523 818 - -
Cmu08g1541 822 Gene3D Mitochondrial carrier domain 523 818 IPR023395 -
Cmu08g1541 822 Gene3D Mitochondrial carrier domain 131 420 IPR023395 -
Cmu08g1541 822 ProSiteProfiles Solute carrier (Solcar) repeat profile. 725 811 IPR018108 -
Cmu08g1541 822 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 518 819 IPR002113 GO:0005471(PANTHER)|GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Cmu08g1541 822 ProSiteProfiles Solute carrier (Solcar) repeat profile. 333 419 IPR018108 -
Cmu08g1541 822 FunFam ADP,ATP carrier protein, mitochondrial 131 425 - -
Cmu08g1541 822 PRINTS Adenine nucleotide translocator signature 174 195 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Cmu08g1541 822 PRINTS Adenine nucleotide translocator signature 338 354 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Cmu08g1541 822 PRINTS Adenine nucleotide translocator signature 207 219 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Cmu08g1541 822 PRINTS Adenine nucleotide translocator signature 130 142 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Cmu08g1541 822 PRINTS Adenine nucleotide translocator signature 233 246 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Cmu08g1541 822 ProSiteProfiles Solute carrier (Solcar) repeat profile. 233 325 IPR018108 -
Cmu08g1541 822 ProSiteProfiles Solute carrier (Solcar) repeat profile. 128 221 IPR018108 -
Cmu08g1541 822 Pfam Mitochondrial carrier protein 520 617 IPR018108 -
Cmu08g1541 822 Pfam Mitochondrial carrier protein 625 719 IPR018108 -
Cmu08g1541 822 Pfam Mitochondrial carrier protein 333 416 IPR018108 -
Cmu08g1541 822 Pfam Mitochondrial carrier protein 128 225 IPR018108 -
Cmu08g1541 822 Pfam Mitochondrial carrier protein 725 813 IPR018108 -
Cmu08g1541 822 Pfam Mitochondrial carrier protein 233 327 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu04g1195 Cmu-Chr4:26513961 Cmu08g1541 Cmu-Chr8:27261931 4.70E-109 dispersed
Cmu07g0292 Cmu-Chr7:2926888 Cmu08g1541 Cmu-Chr8:27261931 3.80E-161 dispersed
Cmu08g1541 Cmu-Chr8:27261931 Cmu08g1642 Cmu-Chr8:28098460 2.10E-52 dispersed
Cmu08g1541 Cmu-Chr8:27261931 Cmu08g1647 Cmu-Chr8:28121491 4.30E-29 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu08g1541 K05863 - csv:101203733 716.457