Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu08g1620 | ATGATCACCGAATCAATGCTCCTCAATCCGACGGCTCACATTTCATCCTGGGACTCCCTCGACGATCCCGCCGCCGCAATCCCTTCTTATTTCACCGCCGGTCACGTGTCGCCCCTCGATTCGCCCACGGCGGCGCTCATGGACTTCGATTCATCCTTCTGGGAAGATCCAGACTTGCCGTCGGCTGTGGACGCCTTCTCGTGCGACCAGTTCCGGATGTATGAGTTCAAAGTCCGCACGTGCGCACGTGGGAGGTCGCACGATTGGACTAAATGTCCGTACGCTCACACCGGCGAGAAGGCTCGCCGCCGAGATCCGAGGAAGTTCAACTATTCCGGCACAGAGTGCCCGGATTTACGCCATGGGTGTTGTAAAAAAGGAGACGCTTGTGAGTACGCTCATGGAGTTTTCGAAAGTTGGCTTCACCCGGACCGGTACCGGACTCAACCGTGCCGTGACGGAACCGGATGCCGACGACGGGTCTGTTTCTTCGCTCACTCGTCGGAGCAGCTCCGGATTCCGGGGAAACAGAGTCTCAGATCTCCACGGGCGAGAGAAATCGCTGTCCCTGCTGTATCATCCCCGACGTCGATCCTAATGTCGCCGTCATCGGACTCGCCGCCTATGTCTCCGATCAGCCCTGTAATCAGCGGCGGCGAATCGTTCAGTAGATTAGTCGCATTGATGCACAGTTTTCACCTGGATGAACTGAAAACGAATCCAGCCGTCTCCGGCTTCAGTCCAAGTCTCCGGCGGAACTCCGGCGCATTTGATCTGTGGGACAGAGAAAATGAAGAAGAACCAGCAATGGAGAGAGTAGAATCAGGGAGAAACCTGCGAGCCCAAATGTACGCGAAATTAATGAGAGAGAATTCAGTGGACCGAGTCCGGCCACTGATATCGGCCGGATCACGGAACTAA | 921 | 56.03 | MITESMLLNPTAHISSWDSLDDPAAAIPSYFTAGHVSPLDSPTAALMDFDSSFWEDPDLPSAVDAFSCDQFRMYEFKVRTCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGTECPDLRHGCCKKGDACEYAHGVFESWLHPDRYRTQPCRDGTGCRRRVCFFAHSSEQLRIPGKQSLRSPRAREIAVPAVSSPTSILMSPSSDSPPMSPISPVISGGESFSRLVALMHSFHLDELKTNPAVSGFSPSLRRNSGAFDLWDRENEEEPAMERVESGRNLRAQMYAKLMRENSVDRVRPLISAGSRN | 306 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 27903551 | 27904471 | + | CmPI595203_08g016200.1 | Cmu08g1620 | 423106 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu08g1620 | 306 | PANTHER | UNKEMPT FAMILY MEMBER | 52 | 237 | IPR045234 | - | |
Cmu08g1620 | 306 | FunFam | Zinc finger CCCH domain-containing protein 66 | 68 | 136 | - | - | |
Cmu08g1620 | 306 | ProSiteProfiles | Zinc finger C3H1-type profile. | 110 | 137 | IPR000571 | GO:0046872(InterPro) | |
Cmu08g1620 | 306 | SMART | c3hfinal6 | 110 | 136 | IPR000571 | GO:0046872(InterPro) | |
Cmu08g1620 | 306 | SMART | c3hfinal6 | 145 | 168 | IPR000571 | GO:0046872(InterPro) | |
Cmu08g1620 | 306 | Gene3D | - | 107 | 178 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu08g1620 | Cmu-Chr8:27903551 | Cmu11g0187 | Cmu-Chr11:2306146 | 8.50E-63 | dispersed | |
Cmu03g2183 | Cmu-Chr3:30337099 | Cmu08g1620 | Cmu-Chr8:27903551 | 4.10E-67 | wgd | |
Cmu05g1809 | Cmu-Chr5:28221820 | Cmu08g1620 | Cmu-Chr8:27903551 | 1.40E-77 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu08g1620 | - | - | - | 0.0 |