Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu08g1670 ATGTCCCCCTCCACTTTACTAATTGGTATGATGACCCGGGTGCAAACTAAGATGTTGAAGCTAAGGCTAAGACTTTTTACGGACCTGCGGAAGAAAGGACCGAGTCTGAACTTAAGAGTCAGAAATGAAAATTTGAAGGTGGTGGGCTCGTCGTTCCTTCGTACTCCGCACGCTCGCTCTCCCAAGTCCCATCTTTCTCGAAATTTCACGGAATTCCCCGAATCAGAGACTATGTACTTGTCTGATAAGCCTCGCCCAATCGATATTTACAAGGAAGAAGGTAGCAGAGATATGATGATCGAGGTCGCCTCCAATGGCGACCACCATATTCAACCTCATCAGCCACAGCCACAGCCACAGCAGACTCATCAGCAGCACCAAATGATGCTTGGTGACAGCAGTGGTGAGGATCATGAAGTCAAGGCTCCCAAGAAGCGAGCGGAGACTTGGGTTCAGGATGAGACTCGAAGCTTAATTGCCCTACGCCGGGAGATGGATGGCTTGTTTAATACTTCGAAATCCAACAAGCATTTGTGGGAGCAGATATCGGCTAAGATGAGGGAAAGGGGATTTGATCGCTCCCCGACTATGTGTACTGATAAGTGGAGGAACTTGCTCAAGGAGTTCAAGAAAGCAAAGCACCATGACAGGGGAAGTGGCTCTGCTAAGATGTCGTGTTACAAGGAGATTGAAGAAATTTTGAAGGAGAGAAGCAAAAGTACGCAGTACAAGAGTCCCACGCCACCCAAGATTGATTCATATATGCAATTCTCAGACAAAGGAATAGAGGATAATGGTCTATCGTTCGGACCTGTTGAAGGTGGCAGACCTTCACTCAATCTTGAAAGACAACTAGATCATGATGGACATCCCCTTGCCATCACAGCAGCTGATGCAGTTGCTGCAACGGGCATTCCACCTTGGAATTGGAGGGAGGCATCAGGAAATGGTGGGGAGAGTCAAGCATTTGGCGGGAGAGTAATATCAGTGAAGTGGGGGGACTACACAAGAAGAATTGGTGTTGATGGCACCTCAGAGGCAATCAAGGAGGCAATCAAGTCTGCATTCAGATTGAGAACCAAACGTGCATTTTGGTTAGAGGATGAGGACCAGGTTGTCAGAAGTCTGGACAGGGACATGCCTTTAGGAAACTACACTCTTCACCTTGATGAAGGTGTGGCTGTTAAAATCTGCCTATATGATGAATCTGACCACTTACCGGTACATACTGAAGACAAAGTTTTTTACATTGAAGAAGATTACCGAGATTTTTTAGCTCGTCGAGGCTGGACATGCCTTCGGGAGTTTGATGGGTATAGAAACATCGATAATATGGATGACCTCCGTCCTGGTGCAATATACCGTGGTTATATTCCCTCTGTATATATCAATATGGATTGTTGGCAATATCGTCTCATCTGTACAATGAGTAGTGCTTCATCTGTTTTTTTTCGAGCCATAACAGAAGAAGCATATAATTTGGAAGGACTCGACTTATACATCGCCAACAAATTCAGCAGGCAATCAACAACTAAATTCAAAGGTCAGTAA 1551 45.58 MSPSTLLIGMMTRVQTKMLKLRLRLFTDLRKKGPSLNLRVRNENLKVVGSSFLRTPHARSPKSHLSRNFTEFPESETMYLSDKPRPIDIYKEEGSRDMMIEVASNGDHHIQPHQPQPQPQQTHQQHQMMLGDSSGEDHEVKAPKKRAETWVQDETRSLIALRREMDGLFNTSKSNKHLWEQISAKMRERGFDRSPTMCTDKWRNLLKEFKKAKHHDRGSGSAKMSCYKEIEEILKERSKSTQYKSPTPPKIDSYMQFSDKGIEDNGLSFGPVEGGRPSLNLERQLDHDGHPLAITAADAVAATGIPPWNWREASGNGGESQAFGGRVISVKWGDYTRRIGVDGTSEAIKEAIKSAFRLRTKRAFWLEDEDQVVRSLDRDMPLGNYTLHLDEGVAVKICLYDESDHLPVHTEDKVFYIEEDYRDFLARRGWTCLREFDGYRNIDNMDDLRPGAIYRGYIPSVYINMDCWQYRLICTMSSASSVFFRAITEEAYNLEGLDLYIANKFSRQSTTKFKGQ 516
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 28312287 28317435 - CmPI595203_08g016700.1 Cmu08g1670 423156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu08g1670 516 CDD GT1 148 213 - -
Cmu08g1670 516 MobiDBLite consensus disorder prediction 109 131 - -
Cmu08g1670 516 Gene3D - 150 212 - -
Cmu08g1670 516 FunFam trihelix transcription factor GT-1 150 212 - -
Cmu08g1670 516 SMART sant 146 208 IPR001005 -
Cmu08g1670 516 MobiDBLite consensus disorder prediction 132 148 - -
Cmu08g1670 516 Pfam Myb/SANT-like DNA-binding domain 149 233 IPR044822 -
Cmu08g1670 516 ProSiteProfiles Myb-like domain profile. 142 206 IPR001005 -
Cmu08g1670 516 PANTHER FI21293P1 113 453 - -
Cmu08g1670 516 MobiDBLite consensus disorder prediction 108 148 - -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
6748 PF13837 Myb_DNA-bind_4 3.20E-20 CL0123 Cmu TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu08g1670 - - - 0.0