Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu08g1697 | ATGTCAAAACCCTGGGGCGGAATCGGAGCCTGGGCTGCTGATGCCGAGCGTGCCGAGGCTGAGGAACGGGAGGCGCAAGCTGCTGCCGCCGCCTCCCAAGCAGAATCGAAGAATTTCCCTAGCCTTAGGGAAGCTGTTAGCACCAAGCCCAAGAAGAAGAAGATGTCGCTGTCGGAATTCACTATGGGGACCTTGACGGGTCCTGGCGCCGGCGGTAGACAAACGGAGAGCCAGGGCTTGACGCCGGAGGAGATGATTCGGCTTCCAACTGGTCCGAAAGACCGCTCTGGTGAGGAAGTACGTCCTGGCCGCCTTGGTGGGGGATTTCCCACTTATGATCGGCACAGTATGTCTGCTGGTCGATATCGAGACCGTGATGAAGGCGATGGGTCCTGGGGTAGTGGTCGACGATCGTATGGTGGGTTCGATGAGGAACGCAGGGGTCCATCTCCTAGGGCTTCCAATTTCGATCAGCCTTCGAGGGCTGACGAGGTGGATAATTGGGCAATGACGAAGAAATCTCCCGCATTGGATTCGGGTCGACAAAATAGGTACGGGTCGCTAGGCGGTGGCGTGGGTGGAATTGCATCTAGGGCAGACGAGGTCGATAACTGGGCAAGTGTCAAAAAGCCTATTCCATCAAGATCCTCCACATTTGGTTCTGGTTATCGTGAGGCAAACGAGCCTGATCGCTGGGGTAGAGGTCGTTCACGTGATAGTGACACAGAACGACCCCGGTTAGTACTGGATCCACCTAAAGGTAATGTCGTTACAAATGAAGCAACGAGGACGAACAAGCCAAGTCCTTTTGGAGCAGCAAGGCCGAGAGAGGAGGTTTTGGCTGAGAAGGGGTTGGATTGGAAGAAGCTGGATACAGAAATTGAGGCCAAAAGAACCAGTAGGCCAACCAGTGCTCACTCTAGCAGGCCTTCGAGTGCTCAATCCAGCCGTTCGGAGGGTCCAGGATTACAGGGCGTAGAAAATGTGGTGAAGCCGAGGCCAAAAGTCAATCCATTCGGGGATGCTAAACCTAGGGAAGTTTTGCTGGAGGAACGTGGCAAGGACTGGCGAAAGATAGATCTTCAACTTGAGCATCGTGCTGTTGACAGGCCTGAAACAGAAGAGGAAAAGATGTTGAAAGAGGAAATTGATGTCCTAAGGAAGGAACTTGAGGAAGGTTTATCTCTGAATGCTAACAAAGAATCGGCGCAAGAATCTGCAGGAGAGATGCAAAATCTGCGCGACAGAATTAATAAAAAAGAACGTGAACTGGAGACGCTGATCCTTGATTTGGATGATAAAGTTCGCTTTGGGAAGAAAGCCACTGAAAGACCTGGCTCTGGAGCAGGCAGGGCTGCTGTCTTTCCAGAAAGGCCTGGCTCTGGAGCAGGTAGGGCCGCTGTCTTTCCAGAAAGACCGCCTTCTCAAGGATCCTTTGATGAGTCCAGAAGTTTTGAGTCTATAGACAGACCTCGATCACGTGGCACTGCAGATGTATGGAGTAGACCCACTGATGATAGAAAACCAATCCAAGGTGCCAGAGATAGAGGATTTTTGGGCAACAGAGACGTGGAGAGGTCAAGGGATAGATGGTAA | 1596 | 52.19 | MSKPWGGIGAWAADAERAEAEEREAQAAAAASQAESKNFPSLREAVSTKPKKKKMSLSEFTMGTLTGPGAGGRQTESQGLTPEEMIRLPTGPKDRSGEEVRPGRLGGGFPTYDRHSMSAGRYRDRDEGDGSWGSGRRSYGGFDEERRGPSPRASNFDQPSRADEVDNWAMTKKSPALDSGRQNRYGSLGGGVGGIASRADEVDNWASVKKPIPSRSSTFGSGYREANEPDRWGRGRSRDSDTERPRLVLDPPKGNVVTNEATRTNKPSPFGAARPREEVLAEKGLDWKKLDTEIEAKRTSRPTSAHSSRPSSAQSSRSEGPGLQGVENVVKPRPKVNPFGDAKPREVLLEERGKDWRKIDLQLEHRAVDRPETEEEKMLKEEIDVLRKELEEGLSLNANKESAQESAGEMQNLRDRINKKERELETLILDLDDKVRFGKKATERPGSGAGRAAVFPERPGSGAGRAAVFPERPPSQGSFDESRSFESIDRPRSRGTADVWSRPTDDRKPIQGARDRGFLGNRDVERSRDRW | 531 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 28493861 | 28498131 | + | CmPI595203_08g016970.1 | Cmu08g1697 | 423183 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu08g1697 | 531 | MobiDBLite | consensus disorder prediction | 303 | 322 | - | - | |
Cmu08g1697 | 531 | MobiDBLite | consensus disorder prediction | 276 | 302 | - | - | |
Cmu08g1697 | 531 | Pfam | Plant specific eukaryotic initiation factor 4B | 1 | 459 | IPR010433 | GO:0003743(InterPro) | |
Cmu08g1697 | 531 | Pfam | Plant specific eukaryotic initiation factor 4B | 457 | 517 | IPR010433 | GO:0003743(InterPro) | |
Cmu08g1697 | 531 | Coils | Coil | 403 | 430 | - | - | |
Cmu08g1697 | 531 | Coils | Coil | 15 | 37 | - | - | |
Cmu08g1697 | 531 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4B | 1 | 439 | IPR010433 | GO:0003729(PANTHER)|GO:0003743(PANTHER)|GO:0003743(InterPro) | |
Cmu08g1697 | 531 | MobiDBLite | consensus disorder prediction | 227 | 248 | - | - | |
Cmu08g1697 | 531 | MobiDBLite | consensus disorder prediction | 117 | 132 | - | - | |
Cmu08g1697 | 531 | MobiDBLite | consensus disorder prediction | 439 | 531 | - | - | |
Cmu08g1697 | 531 | MobiDBLite | consensus disorder prediction | 483 | 531 | - | - | |
Cmu08g1697 | 531 | MobiDBLite | consensus disorder prediction | 1 | 344 | - | - | |
Cmu08g1697 | 531 | MobiDBLite | consensus disorder prediction | 59 | 81 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu02g1165 | Cmu-Chr2:24148932 | Cmu08g1697 | Cmu-Chr8:28493861 | 3.80E-26 | dispersed | |
Cmu08g1697 | Cmu-Chr8:28493861 | Cmu02g0448 | Cmu-Chr2:4101585 | 5.80E-35 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu08g1697 | K03258 | - | csv:101206526 | 922.924 |