Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu08g1697 ATGTCAAAACCCTGGGGCGGAATCGGAGCCTGGGCTGCTGATGCCGAGCGTGCCGAGGCTGAGGAACGGGAGGCGCAAGCTGCTGCCGCCGCCTCCCAAGCAGAATCGAAGAATTTCCCTAGCCTTAGGGAAGCTGTTAGCACCAAGCCCAAGAAGAAGAAGATGTCGCTGTCGGAATTCACTATGGGGACCTTGACGGGTCCTGGCGCCGGCGGTAGACAAACGGAGAGCCAGGGCTTGACGCCGGAGGAGATGATTCGGCTTCCAACTGGTCCGAAAGACCGCTCTGGTGAGGAAGTACGTCCTGGCCGCCTTGGTGGGGGATTTCCCACTTATGATCGGCACAGTATGTCTGCTGGTCGATATCGAGACCGTGATGAAGGCGATGGGTCCTGGGGTAGTGGTCGACGATCGTATGGTGGGTTCGATGAGGAACGCAGGGGTCCATCTCCTAGGGCTTCCAATTTCGATCAGCCTTCGAGGGCTGACGAGGTGGATAATTGGGCAATGACGAAGAAATCTCCCGCATTGGATTCGGGTCGACAAAATAGGTACGGGTCGCTAGGCGGTGGCGTGGGTGGAATTGCATCTAGGGCAGACGAGGTCGATAACTGGGCAAGTGTCAAAAAGCCTATTCCATCAAGATCCTCCACATTTGGTTCTGGTTATCGTGAGGCAAACGAGCCTGATCGCTGGGGTAGAGGTCGTTCACGTGATAGTGACACAGAACGACCCCGGTTAGTACTGGATCCACCTAAAGGTAATGTCGTTACAAATGAAGCAACGAGGACGAACAAGCCAAGTCCTTTTGGAGCAGCAAGGCCGAGAGAGGAGGTTTTGGCTGAGAAGGGGTTGGATTGGAAGAAGCTGGATACAGAAATTGAGGCCAAAAGAACCAGTAGGCCAACCAGTGCTCACTCTAGCAGGCCTTCGAGTGCTCAATCCAGCCGTTCGGAGGGTCCAGGATTACAGGGCGTAGAAAATGTGGTGAAGCCGAGGCCAAAAGTCAATCCATTCGGGGATGCTAAACCTAGGGAAGTTTTGCTGGAGGAACGTGGCAAGGACTGGCGAAAGATAGATCTTCAACTTGAGCATCGTGCTGTTGACAGGCCTGAAACAGAAGAGGAAAAGATGTTGAAAGAGGAAATTGATGTCCTAAGGAAGGAACTTGAGGAAGGTTTATCTCTGAATGCTAACAAAGAATCGGCGCAAGAATCTGCAGGAGAGATGCAAAATCTGCGCGACAGAATTAATAAAAAAGAACGTGAACTGGAGACGCTGATCCTTGATTTGGATGATAAAGTTCGCTTTGGGAAGAAAGCCACTGAAAGACCTGGCTCTGGAGCAGGCAGGGCTGCTGTCTTTCCAGAAAGGCCTGGCTCTGGAGCAGGTAGGGCCGCTGTCTTTCCAGAAAGACCGCCTTCTCAAGGATCCTTTGATGAGTCCAGAAGTTTTGAGTCTATAGACAGACCTCGATCACGTGGCACTGCAGATGTATGGAGTAGACCCACTGATGATAGAAAACCAATCCAAGGTGCCAGAGATAGAGGATTTTTGGGCAACAGAGACGTGGAGAGGTCAAGGGATAGATGGTAA 1596 52.19 MSKPWGGIGAWAADAERAEAEEREAQAAAAASQAESKNFPSLREAVSTKPKKKKMSLSEFTMGTLTGPGAGGRQTESQGLTPEEMIRLPTGPKDRSGEEVRPGRLGGGFPTYDRHSMSAGRYRDRDEGDGSWGSGRRSYGGFDEERRGPSPRASNFDQPSRADEVDNWAMTKKSPALDSGRQNRYGSLGGGVGGIASRADEVDNWASVKKPIPSRSSTFGSGYREANEPDRWGRGRSRDSDTERPRLVLDPPKGNVVTNEATRTNKPSPFGAARPREEVLAEKGLDWKKLDTEIEAKRTSRPTSAHSSRPSSAQSSRSEGPGLQGVENVVKPRPKVNPFGDAKPREVLLEERGKDWRKIDLQLEHRAVDRPETEEEKMLKEEIDVLRKELEEGLSLNANKESAQESAGEMQNLRDRINKKERELETLILDLDDKVRFGKKATERPGSGAGRAAVFPERPGSGAGRAAVFPERPPSQGSFDESRSFESIDRPRSRGTADVWSRPTDDRKPIQGARDRGFLGNRDVERSRDRW 531
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 28493861 28498131 + CmPI595203_08g016970.1 Cmu08g1697 423183
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cmu08g1697 531 MobiDBLite consensus disorder prediction 303 322 - -
Cmu08g1697 531 MobiDBLite consensus disorder prediction 276 302 - -
Cmu08g1697 531 Pfam Plant specific eukaryotic initiation factor 4B 1 459 IPR010433 GO:0003743(InterPro)
Cmu08g1697 531 Pfam Plant specific eukaryotic initiation factor 4B 457 517 IPR010433 GO:0003743(InterPro)
Cmu08g1697 531 Coils Coil 403 430 - -
Cmu08g1697 531 Coils Coil 15 37 - -
Cmu08g1697 531 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 439 IPR010433 GO:0003729(PANTHER)|GO:0003743(PANTHER)|GO:0003743(InterPro)
Cmu08g1697 531 MobiDBLite consensus disorder prediction 227 248 - -
Cmu08g1697 531 MobiDBLite consensus disorder prediction 117 132 - -
Cmu08g1697 531 MobiDBLite consensus disorder prediction 439 531 - -
Cmu08g1697 531 MobiDBLite consensus disorder prediction 483 531 - -
Cmu08g1697 531 MobiDBLite consensus disorder prediction 1 344 - -
Cmu08g1697 531 MobiDBLite consensus disorder prediction 59 81 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g1165 Cmu-Chr2:24148932 Cmu08g1697 Cmu-Chr8:28493861 3.80E-26 dispersed
Cmu08g1697 Cmu-Chr8:28493861 Cmu02g0448 Cmu-Chr2:4101585 5.80E-35 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu08g1697 K03258 - csv:101206526 922.924