Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu08g1717 ATGGCGGAGAATTCGTACGGCATCCGCTCCACTTCTCAATTCCCTCCCAAATCCTTCCTTTCATCTGACAATCCCATCCTTCCCCTCCATTACCACACCTTGCTTTCCTCCACCAACTTCCGAGATCGGATTCCTGTCTTCGGATCCCATGACTTGGTTTCCACTACTTCCGCCATATCCCAACCCCAACCACCTTCCACTACTCCAGATTTCCCACTCCCAGAAGATGCTCTCACCCTCACCAAGGCCAAAATTCTCTCTCATCCTACCTATCCTCGTTTGCTTCAAGCTTATATTGACTGCCAGAAGGTTGGAGCTCCTCCGGAGATAGCTTGCTTGTTGGAGGAAATCCGGCGAGAAAACGACAGTCACAAACAAAACGCCATCTCCACGTGCTTTGGAGCCGATCCCGAGCTCGATGAGTTCATGGAAGCGTACTGTGACATGCTGGTGAAGTATAAATCAGATCTCTCGAGGCCCTTTCATGAAGCTTCTTCCTTCTTGAACAGCATTCAACTGCAACTTAGCGACCTCTGCGCTGGTGCTTCCACCAGAACCCCTTCCAGTAAATTTAAGATATGCGCAGAATTTACACAACTTTCACCTCCCCCTCTGTCATCTATAAATGCCTGGAAGGCCCTCCTCCTCCTAGTGCATGCTGGATTGGTTGAATTAGTCACACGTAACGCCAGTGTGGCAGGTGGTGTAGATTGTTACCTTTGCTTTATATGCTGGACTGTATCAAACAGTTCCCTCATCTTATTGGACTAG 771 48.9 MAENSYGIRSTSQFPPKSFLSSDNPILPLHYHTLLSSTNFRDRIPVFGSHDLVSTTSAISQPQPPSTTPDFPLPEDALTLTKAKILSHPTYPRLLQAYIDCQKVGAPPEIACLLEEIRRENDSHKQNAISTCFGADPELDEFMEAYCDMLVKYKSDLSRPFHEASSFLNSIQLQLSDLCAGASTRTPSSKFKICAEFTQLSPPPLSSINAWKALLLLVHAGLVELVTRNASVAGGVDCYLCFICWTVSNSSLILLD 256
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 28608197 28610629 - CmPI595203_08g017170.1 Cmu08g1717 423203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu08g1717 256 SMART KNOX1_2 79 123 IPR005540 GO:0003677(InterPro)|GO:0005634(InterPro)
Cmu08g1717 256 PANTHER FUSED COMPOUND LEAF 1 75 186 - -
Cmu08g1717 256 Pfam KNOX1 domain 82 122 IPR005540 GO:0003677(InterPro)|GO:0005634(InterPro)
Cmu08g1717 256 SMART KNOX2_2 129 180 IPR005541 GO:0003677(InterPro)|GO:0005634(InterPro)
Cmu08g1717 256 Pfam KNOX2 domain 133 179 IPR005541 GO:0003677(InterPro)|GO:0005634(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu08g1717 Cmu-Chr8:28608197 Cmu05g2599 Cmu-Chr5:34673380 2.00E-57 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu08g1717 - - - 0.0