Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu09g0023 ATGGGGAAAGCTACCAGATGGTTGAAGGGTTTATTGGGGATCAAGAAAGAAAAAGACCCATCTGGGAATTCAAATTCAAATTCAAATTCAACCACCCTCGCCGCCGACAGAAAGGACAAGAAACGCTGGAGTTTTGCAAAGTCCGCTAGAGATTCCGGCCAAACGCCGCCTCCACCGCCGGACACTACTTGGTTCAGATCCTCCTACATTTCTGATTCAGAGAAAGAGCAGAACAAACACGCAATTGCTGTAGCTGCAGCCACCGCCGCCGCCGCAGACGCCGCCGTCGCGGCCGCGCAAGCGGCGGTGGCCGTCGTCCGCCTGACTAGCCAAGGAAGAGGGTCTCTTTATATCACTGGAAGAGATAGATGGGCTGCTGTGAAGATTCAAACAGTTTTTAGGGGCTATTTGGCAAGAAAGGCCCTGCGAGCTCTCAAAGGGCTTGTTAAATTGCAGGCTGTGGTTAGAGGATTTCTTGTGAGGAAAAGAGCTGCTGCTACTCTTCACAGTATGCAAGCTCTTTTTCGAGCTCAAACTGCAGTTAGAACTCAGAGAGCTCGTCGATCTTTCAACAAAGAGAACAGGTTTATCCCCGAGATTCGTCCCCGAAAATCTTCGGAACGCTTTGATGAAACAAGAAGTGAATTATTCCATAGTAAGAGGTTGTCTGTAGCATCATCTTATGACACAACCTGTATGAATTCATTGGATGAGAGTCCCAAAATTGTGGAAATCGACACCTACCGAACTCGATCGAGGTCTCGTAGGTACATTTCGACATTGTCTGAATGCGGAGGAGATGATGTAGCTTTCCAAGCAATCTCTTCATCGCCATTACCTTGTCCGAATCGACCTCGCGTTTGCCACAACAATGTGCTTCAAGACTTCGAATGGTGCTTGATGGGTGAGGACTGCAAGTTCCCTACAGCTCACAGCACGCCCCGGCTATCGAATAACTCGTTCGTCTCTGCCAACGTGCCAGTCACCCCATCCAAGAGCGTGTGCGGGGACAGCTTCTTTAGGCCATACATGAACTACTGCCCCAATTATATGGCGAACACACAATCTTTCAAGGCAAAACTGAGGTCTCAAAGTGCCCCAAAGCAAAGGCCAGAGCCAGGGTCCAAGAAGAAGCTATCATTGAATGAAATAATGGCAGCAAGAAACAGCTTGAGCAGTGTAAGAATGCGAAGACCAAATAACCAAATGCTGCAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATGATGATGATGATGATGATGATGAAGAAGAAGAAGAAACATCATATGGTTTTTGA 1299 47.58 MGKATRWLKGLLGIKKEKDPSGNSNSNSNSTTLAADRKDKKRWSFAKSARDSGQTPPPPPDTTWFRSSYISDSEKEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSQGRGSLYITGRDRWAAVKIQTVFRGYLARKALRALKGLVKLQAVVRGFLVRKRAAATLHSMQALFRAQTAVRTQRARRSFNKENRFIPEIRPRKSSERFDETRSELFHSKRLSVASSYDTTCMNSLDESPKIVEIDTYRTRSRSRRYISTLSECGGDDVAFQAISSSPLPCPNRPRVCHNNVLQDFEWCLMGEDCKFPTAHSTPRLSNNSFVSANVPVTPSKSVCGDSFFRPYMNYCPNYMANTQSFKAKLRSQSAPKQRPEPGSKKKLSLNEIMAARNSLSSVRMRRPNNQMLQEEEEEEEEEDDDDDDDDEEEEETSYGF 432
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 529912 531683 + CmPI595203_09g000230.1 Cmu09g0023 423252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu09g0023 432 ProSiteProfiles Zinc finger C3H1-type profile. 282 314 IPR000571 GO:0046872(InterPro)
Cmu09g0023 432 MobiDBLite consensus disorder prediction 1 63 - -
Cmu09g0023 432 Gene3D - 75 148 - -
Cmu09g0023 432 Pfam IQ calmodulin-binding motif 123 143 IPR000048 GO:0005515(InterPro)
Cmu09g0023 432 Pfam IQ calmodulin-binding motif 149 163 IPR000048 GO:0005515(InterPro)
Cmu09g0023 432 MobiDBLite consensus disorder prediction 19 33 - -
Cmu09g0023 432 ProSiteProfiles IQ motif profile. 122 150 - -
Cmu09g0023 432 MobiDBLite consensus disorder prediction 405 432 - -
Cmu09g0023 432 MobiDBLite consensus disorder prediction 385 400 - -
Cmu09g0023 432 MobiDBLite consensus disorder prediction 359 432 - -
Cmu09g0023 432 ProSiteProfiles IQ motif profile. 146 173 - -
Cmu09g0023 432 PANTHER IQ-DOMAIN 5-RELATED 6 385 - -
Cmu09g0023 432 SMART iq_5 144 165 IPR000048 GO:0005515(InterPro)
Cmu09g0023 432 SMART iq_5 121 143 IPR000048 GO:0005515(InterPro)
Cmu09g0023 432 Pfam Protein of unknown function (DUF4005) 311 396 IPR025064 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu03g2201 Cmu-Chr3:30509177 Cmu09g0023 Cmu-Chr9:529912 7.10E-84 dispersed
Cmu09g0023 Cmu-Chr9:529912 Cmu09g1952 Cmu-Chr9:35600847 2.00E-09 dispersed
Cmu07g1313 Cmu-Chr7:28460699 Cmu09g0023 Cmu-Chr9:529912 2.20E-44 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu09g0023 - - - 0.0