Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmu09g0055 | ATGGACAGTTTATGGGATGTTTTGGTAGTGACAGCCATTTTTTTGACCACCATTATTCTCTATAGGAACTGCTTTAGACTTCTCAGATCAAAATTCTGCAACAAACTCCCTTTGGGATCTCTTGGCTGGCCTTTCATTGGTGAGACTATTGAGTTCATCTCCTGTGCTTATTCGGACCATCCCGAAACCTTCATGGACAAGCGTCGGCGCCTCTATGGGAAGGTGTTCAAGTCACATATTTTTGGAAGTCCTACCATTGTTTCTACTGATGCAGAAGTCAGTAAGTTCATTCTGCAAAGTGATGCCAAGGCTTTTGTACCGTCTTATCCGAAATCTTTAACAGAATTGATGGGGAAGTCCTCTATTTTGCTGATAAATGGGAGCTTGCAGAAGAGAATTCATGGTCTTGTGGGAGCTTTCTTCAAGTCTTCACATCTCAAAGCTCAAATAACCAAGGATATGGAGTGTTATGTCAAACTATCAATGGCAAATTGGACTGAGAACAATCCTATTTACCTTCAAGATGAAACCAAAAATATTTCCTTTCAAGTATTAGTAAAGATATTGATTAGTTTACATCCTGGTCAAAGGATGGAGTTTCTCAAGAAACAGTTTCAAGAATTCATAGCTGGGCTCATGGCTTTGCCAGTGAACATACCTGGAAGCAGGCTTTACCAATCCTTGCAGGCCAAAAGGAATATGGTCAAACTAGTAAAGAAGATAATACAAGAGAGAAAAAGCTGTGGAATTTCCCGTGTCCCAAAAGATGTCATGGAAGTTTTGCTCAAAGATGAAAATGAAGAACTAACAGATGATCTAATAGCAGAGAACATGATTGACATGATGATTCCTGGGGAAGATTCAGTGCCAATCTTAATGACTCTTGCAGTAAAATACCTCTCGGATTGCCCTGCCGCACTTCAACAATTAACTGAGGAAAACTTGAAGATGAAAGGACTGAAAGAGCAGCTCGGTGAGGCATTGCATTGGAGCGATTACTTATCGATGCCGTTTACGCAGAGTGTGATCACTGAGACATTAAGGATGGGAAACATTATAATTGGGGTGATGCGTAAGGCCATGAAAGACATGAAGATAAAAGGATACCTAATACCTAAGGGTTGGTCAGTGCTTACATACTTTAGATCTGTTCATCTTGACCACAATCACTATGACTGCCCTTACAAGTTCAATCCATGGAGGTGGCAAGACAGAGACTTGAGTAGTTGTAACTTCACTCCTTTTGGAGGTGGACAAAGACTATGCCCTGGACTTGACTTAGCCAGGCTTGAAGCTTCCATCTTCCTTCACCACTTTGTCACTCACTTCAGATGGATTGCTGAGGAAGATAGAATCATAAACTTCCCCACAGTGAGGATGAAGAAAAGGATGCCAGTTTGGGTGATGAGAAGAAGGGACCCATAA | 1425 | 41.33 | MDSLWDVLVVTAIFLTTIILYRNCFRLLRSKFCNKLPLGSLGWPFIGETIEFISCAYSDHPETFMDKRRRLYGKVFKSHIFGSPTIVSTDAEVSKFILQSDAKAFVPSYPKSLTELMGKSSILLINGSLQKRIHGLVGAFFKSSHLKAQITKDMECYVKLSMANWTENNPIYLQDETKNISFQVLVKILISLHPGQRMEFLKKQFQEFIAGLMALPVNIPGSRLYQSLQAKRNMVKLVKKIIQERKSCGISRVPKDVMEVLLKDENEELTDDLIAENMIDMMIPGEDSVPILMTLAVKYLSDCPAALQQLTEENLKMKGLKEQLGEALHWSDYLSMPFTQSVITETLRMGNIIIGVMRKAMKDMKIKGYLIPKGWSVLTYFRSVHLDHNHYDCPYKFNPWRWQDRDLSSCNFTPFGGGQRLCPGLDLARLEASIFLHHFVTHFRWIAEEDRIINFPTVRMKKRMPVWVMRRRDP | 474 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 798985 | 802895 | - | CmPI595203_09g000550.1 | Cmu09g0055 | 423284 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmu09g0055 | 474 | PANTHER | CYTOCHROME P450 26 | 35 | 447 | - | GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER)|GO:0016709(PANTHER) | |
| Cmu09g0055 | 474 | CDD | CYP90-like | 68 | 466 | - | - | |
| Cmu09g0055 | 474 | PRINTS | E-class P450 group I signature | 412 | 422 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu09g0055 | 474 | PRINTS | E-class P450 group I signature | 69 | 88 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu09g0055 | 474 | PRINTS | E-class P450 group I signature | 340 | 358 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu09g0055 | 474 | PRINTS | E-class P450 group I signature | 380 | 404 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu09g0055 | 474 | PRINTS | E-class P450 group I signature | 422 | 445 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu09g0055 | 474 | FunFam | 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 | 27 | 471 | - | - | |
| Cmu09g0055 | 474 | SUPERFAMILY | Cytochrome P450 | 34 | 471 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu09g0055 | 474 | Pfam | Cytochrome P450 | 38 | 451 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu09g0055 | 474 | Gene3D | Cytochrome P450 | 29 | 470 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu09g0055 | 474 | Coils | Coil | 307 | 327 | - | - | |
| Cmu09g0055 | 474 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 415 | 424 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmu09g0055 | Cmu-Chr9:798985 | Cmu09g0926 | Cmu-Chr9:9227003 | 3.60E-60 | dispersed | |
| Cmu01g1933 | Cmu-Chr1:32689631 | Cmu09g0055 | Cmu-Chr9:798985 | 5.80E-138 | transposed | |
| Cmu06g0156 | Cmu-Chr6:1601220 | Cmu09g0055 | Cmu-Chr9:798985 | 5.90E-60 | transposed | |
| Cmu06g0395 | Cmu-Chr6:4505851 | Cmu09g0055 | Cmu-Chr9:798985 | 2.50E-80 | transposed | |
| Cmu07g0459 | Cmu-Chr7:4934650 | Cmu09g0055 | Cmu-Chr9:798985 | 1.90E-101 | transposed | |
| Cmu07g0913 | Cmu-Chr7:23112257 | Cmu09g0055 | Cmu-Chr9:798985 | 1.20E-90 | transposed | |
| Cmu09g1868 | Cmu-Chr9:34815398 | Cmu09g0055 | Cmu-Chr9:798985 | 5.90E-70 | transposed | |
| Cmu10g1187 | Cmu-Chr10:4551434 | Cmu09g0055 | Cmu-Chr9:798985 | 1.70E-70 | transposed | |
| Cmu11g0497 | Cmu-Chr11:5421664 | Cmu09g0055 | Cmu-Chr9:798985 | 8.20E-86 | transposed | |
| Cmu07g1344 | Cmu-Chr7:28728087 | Cmu09g0055 | Cmu-Chr9:798985 | 1.30E-168 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmu09g0055 | K12638 | - | csv:101217830 | 875.93 |