Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu09g0061 | ATGAAAACTGCAGAAATTTCCTTTGAAATTAGGACTCTGATGGGGTTTCGATTACTGTTTCTGCTGTTCCAAATTTATTTTGCTGTTAGCTCTTTCTCTGTCTGTGAAGCTGCAGTTATTCTCCCAGGCAGGCCGAGTGGATTGCGTTCTGCACTCCCAGACCATGCTGTCACTCCAACATCTCATGGCTTTGGCAGGAAACACCATGGCAATTTGGATAATGCAGCCCCTAGTAAACCATTTAAAAGTTCATCTCCTCAGATCCATTCTCATTATAAAGCCATTCAATCAGATTATTCAAGTAGAGCTCCTAGCATTGCACTTCCGCCCACCGCGCCTGCTGAGAAATGGGGGCACGAACATACACTCTCACCATTGATCTCTTTTCATAAATTTCGTCATTCAAGAAGGAAGTTCAGGAACAATGCTCCACAGCCTACTTATCATGCATCGCCCCCGACTAGCAGCCAGAAAGGCCCTGCTGCTGTCTCTCCAATTCAGTCACCGTTACCATCTGTAGCGAGAGGGAGGTTGCCCGGACCTGCACCATCACCAACAATTCAACCCAACCACTATTATATGCCCATTCCTGCACCTACAACTTCTCCTATGGGTTCTTACAAGAAGAAGAAGAGTATGCCACCATCACAAGTTATGATTCTACCACCTCCACCTCCTAATGGGGATTGTACAATAGCATGTACAGAGCCATTGACATATACGCCTCCCGGGACGCAATGTGGCTGCGTGTGGCCAATTCAAGTCAAAATCATTCTTGATGTTGCAGTATACACGTTTTTTCCTCTGGTTTCAGAACTTGCAGAGGAAATTGCTGACAGTATCAGTCTGAACCAAAGCCAAGTTCGAATTATGGGAGCCGATGCTGCTAGTCAGCAGTTAGAAAAAACGACTGTCCTCATCAACTTGGTTCCGAGAGGATCAAAATTCAATCATAACACAGCCTTTTTTATATATCAGAAATTTTGGCGGAGAAAGATATTCATCAACCCTTCTTTGTTTGGAAGATATCAAGTACTAAATGTCAAATATCCAGGTCTTCCGCCATCTCCTCCATTGGCACCTTCAGGTACGTCGTCTATTAATGATGGTTTGAACACTAGCAATACTAATGCTGGAAATGCAATTAAACCGTTGGGAGTTGACGTGCCAAGACGAAAAAAAGAAGGGCTTGGCAGAAACATGATTGCGGTGATTACTATATCATCGTTCACTGCCCTTGTCATGTGTGTTGGGCTTGCTTGGCTTTGCCTGTTGAGATGCAGAGTGTCTACACATCAACCAGCACAAATTCCTCAAAACTTGATAGCCTCACCTACAAAACCACCAGGCACTGCTGGATTGATAATGGTTGGAAGTGAACCTGGTTCTTCATCCATGCCTCTCGATGCCGATCCTATGACGTATATTGGAGCTGCAAAGAACTTCACCTTGAAAGATATGGAGAAAGCCACTGACAACTTCGATACTGCAAGAATATTAGGAGAAGGTGGCTTTGGAATTGTATACAGTGGCAGTTTAGACGATGGAAGAGAAGTGGCTGTGAAGGTTCTTAAACGACATAATCAACATGGTATTCGGGAATTCTTGGCAGAAGTCGAGATGCTGAGCCGTCTACACCATAGAAATCTAGTTAAGTTGATTGGTATCTGCACAGAAGATCAGATTCGCTGCCTGGTATATGAATTGGTTCCTAGTGGAAGTGTCGAATCACACTTACATGGCATTGACAAGTTAACCAGTCCACTTGACTGGGATGCCCGCATGAAGATTGCCCTTGGTGCTGCTCGAGGCCTAGCCTATCTGCATGAAGACTCCAATCCTCGAGTCATTCATCGAGACTTCAAAGCTAGCAACATCTTGTTGGAATATGACTTTACACCTAAAGTTTCAGATTTTGGATTAGCTAGAACTGCACTAGAGGAAGGAAACAAGCACATCTCAACACATGTCATGGGAACTTTTGGTTATCTAGCTCCAGAATATGCAATGACTGGCCACCTTCTTGTAAAGAGCGATGTCTATAGCTATGGTGTTGTCCTTCTAGAGCTGCTTACAGGAAGAAAGCCAGTAGACTTGTCACTTCCACCCGGACAAGAAAATCTTGTTGCTTGGGCTCGTCCGCTTCTCACGAGCAAGGAAGGATTAGATGCAATAACAGACCCAGCTATCAAGTCTGACATCTCCATTGATAGCTTGGCCAGAGTAGCAGCGATTGCTTCAATGTGTGTACAGCCAGAAGTATCTCACAGACCATTTATGGGTGAGGTTGTTCAAGCCCTGAAACTTGTTTGCAATGAATTTGAAGAAACTAACGATCCAGTTTCACGAAGTTACAGCCGAGACGAACTTCTAAGTTACATGGATAGTAAATTTGGAGGAATTTCCGGTGAAATACTAAACGCTCCTGAGACCTCGCACACCTTTCCTTCAGGAAAAGAGAAGAATGTAGGATTATCGGCATCGGATTTGATCAGTGCATCTGCAAGATTTGAAGGACAGGAACTGGTTTCTTCTAGATGGCATTCATCAAACTCGGAACCATTAAGAACTGGAAGAAAAAAGCACTTATGGCAGAAGCTAAGAAGTTTCTCACGAGGCAGCTTCAGTGAACATGGCTTTTCTGCAAAGTTTTGGCCTGGATTTCGTTAG | 2670 | 44.12 | MKTAEISFEIRTLMGFRLLFLLFQIYFAVSSFSVCEAAVILPGRPSGLRSALPDHAVTPTSHGFGRKHHGNLDNAAPSKPFKSSSPQIHSHYKAIQSDYSSRAPSIALPPTAPAEKWGHEHTLSPLISFHKFRHSRRKFRNNAPQPTYHASPPTSSQKGPAAVSPIQSPLPSVARGRLPGPAPSPTIQPNHYYMPIPAPTTSPMGSYKKKKSMPPSQVMILPPPPPNGDCTIACTEPLTYTPPGTQCGCVWPIQVKIILDVAVYTFFPLVSELAEEIADSISLNQSQVRIMGADAASQQLEKTTVLINLVPRGSKFNHNTAFFIYQKFWRRKIFINPSLFGRYQVLNVKYPGLPPSPPLAPSGTSSINDGLNTSNTNAGNAIKPLGVDVPRRKKEGLGRNMIAVITISSFTALVMCVGLAWLCLLRCRVSTHQPAQIPQNLIASPTKPPGTAGLIMVGSEPGSSSMPLDADPMTYIGAAKNFTLKDMEKATDNFDTARILGEGGFGIVYSGSLDDGREVAVKVLKRHNQHGIREFLAEVEMLSRLHHRNLVKLIGICTEDQIRCLVYELVPSGSVESHLHGIDKLTSPLDWDARMKIALGAARGLAYLHEDSNPRVIHRDFKASNILLEYDFTPKVSDFGLARTALEEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSLPPGQENLVAWARPLLTSKEGLDAITDPAIKSDISIDSLARVAAIASMCVQPEVSHRPFMGEVVQALKLVCNEFEETNDPVSRSYSRDELLSYMDSKFGGISGEILNAPETSHTFPSGKEKNVGLSASDLISASARFEGQELVSSRWHSSNSEPLRTGRKKHLWQKLRSFSRGSFSEHGFSAKFWPGFR | 889 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 847653 | 851961 | - | CmPI595203_09g000610.1 | Cmu09g0061 | 423290 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu09g0061 | 889 | MobiDBLite | consensus disorder prediction | 141 | 163 | - | - | |
Cmu09g0061 | 889 | Gene3D | Transferase(Phosphotransferase) domain 1 | 570 | 789 | - | - | |
Cmu09g0061 | 889 | CDD | STKc_IRAK | 500 | 768 | - | - | |
Cmu09g0061 | 889 | SUPERFAMILY | Protein kinase-like (PK-like) | 474 | 767 | IPR011009 | - | |
Cmu09g0061 | 889 | MobiDBLite | consensus disorder prediction | 59 | 86 | - | - | |
Cmu09g0061 | 889 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 616 | 628 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cmu09g0061 | 889 | Pfam | Protein tyrosine and serine/threonine kinase | 497 | 767 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cmu09g0061 | 889 | FunFam | receptor-like serine/threonine-protein kinase ALE2 | 468 | 569 | - | - | |
Cmu09g0061 | 889 | PANTHER | OS01G0750732 PROTEIN | 230 | 788 | IPR050885 | - | |
Cmu09g0061 | 889 | Gene3D | Phosphorylase Kinase; domain 1 | 465 | 569 | - | - | |
Cmu09g0061 | 889 | FunFam | Receptor-like serine/threonine-protein kinase ALE2 | 570 | 787 | - | - | |
Cmu09g0061 | 889 | MobiDBLite | consensus disorder prediction | 176 | 192 | - | - | |
Cmu09g0061 | 889 | MobiDBLite | consensus disorder prediction | 141 | 192 | - | - | |
Cmu09g0061 | 889 | ProSiteProfiles | Protein kinase domain profile. | 494 | 775 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cmu09g0061 | 889 | ProSitePatterns | Protein kinases ATP-binding region signature. | 500 | 522 | IPR017441 | GO:0005524(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu07g0206 | Cmu-Chr7:1962706 | Cmu09g0061 | Cmu-Chr9:847653 | 3.70E-170 | dispersed | |
Cmu09g0061 | Cmu-Chr9:847653 | Cmu10g1924 | Cmu-Chr10:24654674 | 6.40E-103 | dispersed | |
Cmu03g2151 | Cmu-Chr3:29986813 | Cmu09g0061 | Cmu-Chr9:847653 | 1.40E-208 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
75763 | PF07714 | PK_Tyr_Ser-Thr | 1.00E-46 | CL0016 | Cmu | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu09g0061 | - | - | - | 0.0 |