Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu09g0064 ATGAGCCCCATCAATCACCACCAACACTTCTCCAAATCCACCTCCGCCGCCGTCACAACCACCACTTCCTCCACCACCACCACCACCCAAGCCTGCGCCGCCTGTAAGTACCAACGCCGTAAGTGCGCTCCCGATTGCATTCTCGCCCCTTATTTCCCTCACGATCGTCAACGTCAATTCTTAAACGCTCACAAACTCTTCGGCGTTAGCAATATCACTAAAATCATTAAGAATCTCGATCCGTTTGAGAAGGAAGAAGCAATGCGTACCATTATTTTTCAATCTGATGTTCGATCCGTCGATCCTGTTGGCGGTTGTTATCGGATTATTCGAGACCTTCAACGCCAAATTGAATATAGCAAGGCGGAGCTTGAGATCGTGCTTCATCAATTGGCTATTTGTAAACAGCAGGCCGCTGCTGCTGCGGCTGCTGCTGCGGCCGCTGCGGCTATTCTTGAGGCGGATCCGATGAGTGGATACGGCGGAATCGAGCATCAATTTGTGGAAGGGTATGAAGGGGAAGGGTTTGTAGTTGGGGAAAATGAGAATGGGGAAAGTTTGGAAGATCAGGACGTGGAGGTTTGGGGAATTCAAGATTCGTGTTCTTCATTACAATTGAAACAAGCCGGCTCTGTTCATGATTTTCACGATATCAAGATCGATACAAATAATAATCACCTTCAACAACAACTTAAATTTCAACACGATCGTCATCCTGATCTGGTTCATCAGAGTGAAGAACCTATGCTGAAGATGGACAATGTGATATTGAAAGAAGATTCTGACCCAATACAGCAGGCTCAAGATCAAGAACTTAAAGGTTCGGGGGTTAAGGCACCTGCTCCTGCTTCTTTCCTTGAAGTAGGAGATCCAAACCTTCAAATTCCACTTTTCTTATACTCTTTGCTCAGAAAGTGA 918 46.3 MSPINHHQHFSKSTSAAVTTTTSSTTTTTQACAACKYQRRKCAPDCILAPYFPHDRQRQFLNAHKLFGVSNITKIIKNLDPFEKEEAMRTIIFQSDVRSVDPVGGCYRIIRDLQRQIEYSKAELEIVLHQLAICKQQAAAAAAAAAAAAAILEADPMSGYGGIEHQFVEGYEGEGFVVGENENGESLEDQDVEVWGIQDSCSSLQLKQAGSVHDFHDIKIDTNNNHLQQQLKFQHDRHPDLVHQSEEPMLKMDNVILKEDSDPIQQAQDQELKGSGVKAPAPASFLEVGDPNLQIPLFLYSLLRK 305
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 868298 870779 - CmPI595203_09g000640.1 Cmu09g0064 423293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu09g0064 305 MobiDBLite consensus disorder prediction 1 21 - -
Cmu09g0064 305 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 29 228 - -
Cmu09g0064 305 ProSiteProfiles LOB domain profile. 30 131 IPR004883 -
Cmu09g0064 305 Pfam Lateral organ boundaries (LOB) domain 31 126 IPR004883 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g1019 Cmu-Chr2:16549830 Cmu09g0064 Cmu-Chr9:868298 2.50E-19 dispersed
Cmu08g1640 Cmu-Chr8:28088326 Cmu09g0064 Cmu-Chr9:868298 1.30E-26 dispersed
Cmu09g0064 Cmu-Chr9:868298 Cmu09g1770 Cmu-Chr9:33859573 4.80E-26 dispersed
Cmu09g0064 Cmu-Chr9:868298 Cmu10g2152 Cmu-Chr10:27552403 1.10E-22 transposed
Cmu09g0064 Cmu-Chr9:868298 Cmu06g1772 Cmu-Chr6:28767374 1.10E-22 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
6757 PF03195 LOB 1.00E-35 No_clan Cmu TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu09g0064 - - - 0.0