Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu09g0078 ATGGCAACTCCCATGGCTGAAGAAGCAACCATCGATTCCAATTCCACTGCCCACACGGTGATCGCCATTAGTAGGGACAAGAACAGTCAATATGCGGTTAAATGGGCTGTGGAACACCTGTTCAATAGGAAGAACACTGGCGATTGCATCCTTATCCATGTTCGCAACCAGAGTTTGCATCCCCAGGAGGCGGATGCGGTTCCTAAGGAGTATCGTCCACCATCTGAAGCAGAGTTGCATCAGTTCTTCCTTCCCTATCGAGGATTCTGCGCACGAAAAGGAATAGTTACAAAGGAGACAATCATCCATGACATTGATGTTCCAAGTGCACTTATTGACTATGTCAGTAAACATTCCATTAGCAATATTGTTGTGGGTGCTTCCAGCCGGAATGCTATTTTGAGGAAGTTCAAGAATCCTGATGTCCCAACGTGCTTACTCAAATCAACTCCAGAATCATGCTCTGTATATGTCATAGCTAGAGGAAAAGTTCATACTAAGAGATTGAGAAAGCGACATAAGTCACAGACTGATGTGAGAGAAACTCAAACCAGAACTCCAGAAATCGACAGGTCTCTATCAAAAATACAAAAATCAGCATATTCTAATATCTCAGAACTATCTGAAGATAGAAACAGGGATAGTTCTGGCACCAGTAATGATTCAATGTCAGGCATTAGTGACTTTTCGGGGCCTCTCAGTTTCAAATCAATTGAAACATCCTTTGAGAGCCCAGATTTTTCCTTAACCTCCTCAGAGACTAGTACGAGGAGCTTTGTCTCCTCTAACACCCCACCTTCCATTGAATCTGAGATGAGAAAGTTGAGGTTTGAACTCAAACAGACGATGGAAATGTATGACTCAGCTTCCAAGGAAGCTGTAGTAGCAAAACAAAAGGCAAATGAACTCCAACAGTTGAAGATGGATATGGAAGAAGACAGAAAAATTGAGCGTGGTAAATCTGCAGAAGAGGTTCTTAGAGCATTGGCAGAGTTTGAGAAGCAGAAGAACAAGGCTGCGACAGAAGCAGCTCTAATGGCGCAGAAGTTAGCCGAATTAGAGAACCAGAAAAAACGAATTGTTACTGAAGAAAAAGCTAGGATTGAGGCAGAGGAGAGGAAGAAAACAATGGAGTTATTTGAACGCAGTAATATCTGTTATAGACGATACAGCATTGACGAGATTGAAGCTGCAACAGATCATTTTAATGAGTCAAACAAGATTGGTGAAGGTGGCTATGGACCTGTTTACCAAGCCTTACTTGATCATACTCCTGTTGCCATTAAGATATTGCGACCAGATAGATCTCATGGGCAGAGACAATTCCAGCAAGAGATTGAGGTTCTAAGCCGCATGAGGCATCCGCACATGGTTCTCCTCTTAGGTGCCTGCCCAGAATACGGTTGCCTTGTTTATGAATATATGGAAAACGGGAGTTTGGAAGACCGCCTCTTCCAAAAAGATAACACTCCTCCAATGCCTTGGAGAACACGTTTCAGGATAGCTTCTGACATTGCCACTGCCCTACTCTTCCTTCATCAAATGAAGCCAGAACCTGTGGTGCATCGTGATCTCAAGCCAGCCAACATTCTCTTAGATCACAACTACGTGAGCAAAATAGGTGATGTGGGTTTGGCCAGGCTAGTTCCACCATCGGTTGCTGATAGTGTCACTCAATATCACATGACTGCTGCAGCTGGAACCTTCTGTTACATTGATCCAGAATATCAACAAACAGGAATGTTGGGGGTGAAATCAGATATTTACTCATTTGGTGTTCTGCTACTTCAGCTCATCACTGCAAGGTCACCGATGGGTCTTTCATATCAGGTTGAGGAGGCCATTGAACATGGCAAATTCCCGCAGATACTTGATCCTGCCATTACAGATTGGCCTATTGAAGATACTCTTGGACTCGCTCAATTAGCCCTGAAGTGCTGTGAGCTAAGGAAAAGAGATAGGCCCGACCTCCGTACAGTTCTATTGCCAGAACTGGTCAGGTTAAAAAATCTGGGGTCAGGCGAAATGCCACCAAAGGGTAAGCTCCCAAATGTCGGCAAAGCGCGTGATCAACGGGCTTCCAACTCAGTTCCAATTTTGAATGGATCAGAGAGTGAGATAAAGAAAAAATGGAGCTGGAACAACAGTGATGCAAAAGTCTTAAATATACCATTACCAATGAGTGGAAAACAAGTTGATGTACTCTCAAAGAAGCAGCAAAGCTCTGAACGCTGTTGGTCTTTGGTAGGTTGTGCTTCTGCTGCTACTATGGGGTTGAAGAAACTACACTCATTTTCATAA 2301 43.68 MATPMAEEATIDSNSTAHTVIAISRDKNSQYAVKWAVEHLFNRKNTGDCILIHVRNQSLHPQEADAVPKEYRPPSEAELHQFFLPYRGFCARKGIVTKETIIHDIDVPSALIDYVSKHSISNIVVGASSRNAILRKFKNPDVPTCLLKSTPESCSVYVIARGKVHTKRLRKRHKSQTDVRETQTRTPEIDRSLSKIQKSAYSNISELSEDRNRDSSGTSNDSMSGISDFSGPLSFKSIETSFESPDFSLTSSETSTRSFVSSNTPPSIESEMRKLRFELKQTMEMYDSASKEAVVAKQKANELQQLKMDMEEDRKIERGKSAEEVLRALAEFEKQKNKAATEAALMAQKLAELENQKKRIVTEEKARIEAEERKKTMELFERSNICYRRYSIDEIEAATDHFNESNKIGEGGYGPVYQALLDHTPVAIKILRPDRSHGQRQFQQEIEVLSRMRHPHMVLLLGACPEYGCLVYEYMENGSLEDRLFQKDNTPPMPWRTRFRIASDIATALLFLHQMKPEPVVHRDLKPANILLDHNYVSKIGDVGLARLVPPSVADSVTQYHMTAAAGTFCYIDPEYQQTGMLGVKSDIYSFGVLLLQLITARSPMGLSYQVEEAIEHGKFPQILDPAITDWPIEDTLGLAQLALKCCELRKRDRPDLRTVLLPELVRLKNLGSGEMPPKGKLPNVGKARDQRASNSVPILNGSESEIKKKWSWNNSDAKVLNIPLPMSGKQVDVLSKKQQSSERCWSLVGCASAATMGLKKLHSFS 766
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 944752 948973 - CmPI595203_09g000780.1 Cmu09g0078 423307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu09g0078 766 MobiDBLite consensus disorder prediction 168 226 - -
Cmu09g0078 766 Coils Coil 322 373 - -
Cmu09g0078 766 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 374 474 - -
Cmu09g0078 766 Gene3D Transferase(Phosphotransferase) domain 1 475 671 - -
Cmu09g0078 766 Gene3D Phosphorylase Kinase; domain 1 367 474 - -
Cmu09g0078 766 ProSitePatterns Serine/Threonine protein kinases active-site signature. 520 532 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu09g0078 766 CDD STK_N 19 162 - -
Cmu09g0078 766 Pfam Protein kinase domain 403 660 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu09g0078 766 MobiDBLite consensus disorder prediction 246 267 - -
Cmu09g0078 766 Gene3D HUPs 5 160 IPR014729 -
Cmu09g0078 766 SUPERFAMILY Protein kinase-like (PK-like) 379 661 IPR011009 -
Cmu09g0078 766 Pfam Universal stress protein family 20 135 IPR006016 -
Cmu09g0078 766 PANTHER OS02G0152300 PROTEIN 21 676 IPR051348 -
Cmu09g0078 766 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 20 159 - -
Cmu09g0078 766 SMART serkin_6 402 666 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu09g0078 766 Coils Coil 272 316 - -
Cmu09g0078 766 MobiDBLite consensus disorder prediction 175 192 - -
Cmu09g0078 766 ProSiteProfiles Protein kinase domain profile. 402 666 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu08g0944 Cmu-Chr8:21775898 Cmu09g0078 Cmu-Chr9:944752 2.00E-182 dispersed
Cmu09g0078 Cmu-Chr9:944752 Cmu11g1150 Cmu-Chr11:21749267 5.30E-154 dispersed
Cmu11g0163 Cmu-Chr11:2098871 Cmu09g0078 Cmu-Chr9:944752 5.60E-113 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75764 PF00069 Pkinase 4.60E-42 CL0016 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu09g0078 - - - 0.0